Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5450g00039 ATGGAACGGTATGATATAATCAAAGATATTGGGTCGGGCAACTTTGGGGTGGCAAAGCTGGTGAGGGATAAAAGGAGCGGTGACTTATATGCTATCAAGTTTATTGAGCGAGGCATAAAGATTGATGAGCATGTCCAAAGGGAGATCACAAACCATAGGTCCTTGATGCATCCCAATATCATTCGATTCAAAGAGGTGTTGCTCACTCCGTCCCATCTTGCCATAGTGATGGAATATGCCGCTGGAGGAGAACTCTTTGAAAGAATATGCAATGCGGGTAGATTCAGTGAAGACGAGGCAAGGTATTTCTTTCAGCAGTTGATTTCTGGAGTCAGCTATTGCCATTCAATGGAAATTTGCCACAGAGATCTTAAGCTGGAAAACACACTCTTAGATGGCAGCACAGCACCCCGACTCAAAGTTTGCGACTTTGGCTACTCAAAGTCATCTGTTCTGCACTCTCAGCCAAAATCTACTGTAGGAACCCCTGCTTATATTGCACCGGAGGTTTTGTCACGAAAGGAATATGATGGAAAGGTTGCAGACGTTTGGTCTTGTGGTGTGACCTTATATGTCATGCTGGTTGGTGCTTATCCTTTTGAAGATCATGAAGATCCTAAAAACTTCAGAAAAACACTTCAGCGGATTCTCAGCGTCCACTATTCTGTACCAGACTATGTTCGCATCTCAAAAGAGTGTAAACACCTTCTATCTAGAATATTTGTGGCCGACCCAGAGAAGAGAATTACGATTCCAGAAATCAAAATGCACCCGTGGTTCCTGAAGAACTTGCCGCTAGAATTTATGGACGAGGGTGGACAAAGTGGGATGCAAGAAGACTCAGCGAACGATTCATGCGGGAGGCAGAGCATTGAAGAAATATTGAGTATAATTCAAGAAGCTCGAAAAGCAGGGGATCAAGGCCAAAAAGTTGGCGGTCAGTTCGTTGGGGTTGGAAGCATGGATCTCGATGACATGGATACTGATGCTGACATTGATGATTTAGAGGCAAGCGGCGATTTTGTCTGTGCTTTATGA 1038 0.4422 MERYDIIKDIGSGNFGVAKLVRDKRSGDLYAIKFIERGIKIDEHVQREITNHRSLMHPNIIRFKEVLLTPSHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGSTAPRLKVCDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKVADVWSCGVTLYVMLVGAYPFEDHEDPKNFRKTLQRILSVHYSVPDYVRISKECKHLLSRIFVADPEKRITIPEIKMHPWFLKNLPLEFMDEGGQSGMQEDSANDSCGRQSIEEILSIIQEARKAGDQGQKVGGQFVGVGSMDLDDMDTDADIDDLEASGDFVCAL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5450g00039 345 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Pral5450g00039 345 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5450g00039 345 Gene3D Transferase(Phosphotransferase) domain 1 80 267 - -
Pral5450g00039 345 CDD STKc_SnRK2 3 259 - -
Pral5450g00039 345 PANTHER SERINE/THREONINE KINASE 2 274 - -
Pral5450g00039 345 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5450g00039 345 SUPERFAMILY Protein kinase-like (PK-like) 2 266 IPR011009 -
Pral5450g00039 345 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Pral5450g00039 345 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Pral5450g00039 345 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5450g00039 345 FunFam Serine/threonine-protein kinase SRK2E 80 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5450g00039 Pral-Chr5450 172363 175293 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5450g00039 3 270 CBL-interacting serine-threonine protein kinases AT4G24400 42.238 8.79e-68 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Pral5450g00039 Pkinase 4.7e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5450g00039 K14498 - zju:107425296 577.4