Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral5450g00032 | ATGAAGAGACTTGGCAGCTCAGATTCTTTGGGCGCTCTCCTGCCCATCTGTCCATCCACAGAAGAACACAGTCCGAGGAACAACAATCGCGCTTACAGTAGGGACTTCCAATCCATGTTCGAGGGGCTAGACGGAGAAGGATGTGTGGAAGAATTGGGCCACCCGACGGAGAAGAAACGCCGTCTGACCGTGGATCAAGTGAAGGCTTTAGAGAAGAACTTCGAAGTAGAAAACAAGCTTGAACCTGAGAGGAAGGTGAAGCTTGCCCAAGAACTCGGATTGCAGCCCAGGCAAGTGGCTGTGTGGTTCCAAAATCGTCGAGCCAGATGGAAAACCAAGCAATTAGAGAGAGACTATGGCGTCCTCAAAGCCAATTATGATGCTCTCAAAATTAACTACGATGCCCTCCAACAAGACAATGAAGCCTTGCTGAAAGAGATTAAAGAACTGAAATCTAGATTGCAAGATCAAGAGAAGAGTGAAGACGTGTCATTGAAAGGAGAGATGAAGCAGCCTAAGTCGGAGGAGAAAGCGATGGGAGTGGGAGTGGGTGCGGGTGCGGAGCCTCCTGAAACGGCCATTCCTGGGGTGGAGTCCGAAGACCTAAATTACGAGTGCTTCATCAGAAACGGCGTCGTAGGAGGTTGCTCACTCTTCCTGGCAGACTTTAACAAAGACGGCGCTTCGGACAGCGACTCGAGCGCAATCCTGAACGAAGATCCAAGCTCTCGTTCCTTGAAATTCAACTGTTCTTCATCGTCGTTTCAGTTCCAGAAGACGTGCCAGACTCAGACTCACTACGTGAAGATGGAAGAGCACAACTTCTTCAGCACAGACGAGGCCTGCAACTTCTTCTCCGACGAACAGGCCCCCACCCTCCAGTGGTGCTGGAGTTAA | 897 | 0.505 | MKRLGSSDSLGALLPICPSTEEHSPRNNNRAYSRDFQSMFEGLDGEGCVEELGHPTEKKRRLTVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDALKINYDALQQDNEALLKEIKELKSRLQDQEKSEDVSLKGEMKQPKSEEKAMGVGVGAGAEPPETAIPGVESEDLNYECFIRNGVVGGCSLFLADFNKDGASDSDSSAILNEDPSSRSLKFNCSSSSFQFQKTCQTQTHYVKMEEHNFFSTDEACNFFSDEQAPTLQWCWS | 298 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral5450g00032 | 298 | PRINTS | Lambda-repressor HTH signature | 84 | 93 | IPR000047 | GO:0003677 | |
Pral5450g00032 | 298 | PRINTS | Lambda-repressor HTH signature | 93 | 109 | IPR000047 | GO:0003677 | |
Pral5450g00032 | 298 | FunFam | Homeobox-leucine zipper protein HAT5 | 51 | 115 | - | - | |
Pral5450g00032 | 298 | SUPERFAMILY | Homeodomain-like | 39 | 115 | IPR009057 | - | |
Pral5450g00032 | 298 | ProSiteProfiles | 'Homeobox' domain profile. | 53 | 113 | IPR001356 | GO:0003677 | |
Pral5450g00032 | 298 | Coils | Coil | 119 | 160 | - | - | |
Pral5450g00032 | 298 | MobiDBLite | consensus disorder prediction | 155 | 175 | - | - | |
Pral5450g00032 | 298 | Gene3D | - | 53 | 120 | - | - | |
Pral5450g00032 | 298 | CDD | homeodomain | 58 | 114 | IPR001356 | GO:0003677 | |
Pral5450g00032 | 298 | SMART | HOX_1 | 56 | 117 | IPR001356 | GO:0003677 | |
Pral5450g00032 | 298 | Pfam | Homeobox associated leucine zipper | 113 | 155 | IPR003106 | GO:0006355|GO:0043565 | |
Pral5450g00032 | 298 | Pfam | Homeodomain | 58 | 111 | IPR001356 | GO:0003677 | |
Pral5450g00032 | 298 | MobiDBLite | consensus disorder prediction | 155 | 195 | - | - | |
Pral5450g00032 | 298 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN | 50 | 297 | IPR045224 | GO:0003700 | |
Pral5450g00032 | 298 | ProSitePatterns | 'Homeobox' domain signature. | 88 | 111 | IPR017970 | GO:0000981|GO:0006355 | |
Pral5450g00032 | 298 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral5450g00032 | Pral-Chr5450 | 129199 | 131355 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral5450g00032 | 1 | 295 | Homeobox Transcription Factor Family | AT4G40060 | 46.519 | 1.21e-74 | 229 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HB-HD-ZIP | Pral5450g00032 | Homeodomain | 1.5e-16 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral5450g00032 | K09338 | - | qsa:O6P43_030496 | 391.734 |