Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5450g00016 ATGGCTACCTGTTCTTCACTTTTACCTGGTACTCACTATTCTTCCTCTTTGAAGCGGAAGAGGCCCCTCAATATTCAGATCCCAGATGTCTTGCAAGAAATCCAGGCACCCAAGCTTCATGATTCGAAGGCATTGAAGGACAACGTTTCTCTTAGCGGAATTGGTTTCGGGGTCTTTTCTGTTAAAGGCAAGAAATCGTGCATGGAAGATGCTCACAAAATTGTTTCTTCTTTAGAGAGCAACCCAAAAAAGGGCTTTTTCGGCGTCTATGATGGGCATGGCGGCAGGAAGGCCGCAGAGTTTGTCGTTGAGAACTTACACGCCAATATTCTCGAAATGGTGGGGAATTGTGAAGAGTCAAGGGCCAAGCGGGAGGCAGTTAAAGCTGGGTATCTAAAGACCGACGAAGAGTTCTTAAAAAAGGGTATAGGAAGTGGTGCTTGTTGTGTGACAGCCTTGATCCATGGAGAAGAGATTGTTGTTTCGAACGTGGGAGATTGCAGGGCTGTTCTTTGCAGAAGTGGAGTGGCTGAAGTTCTCACTAGAGATCACAGAGCGGAACTAGAGGATGAACGGAGAAGAATTGAGGAAAAGGGAGGATACGTGGAGATACATCGAGGAGCTTGGAGAGTGCATGGGGTACTCTCTGTTTCTAGAAGCATTGGGGATGCTCATCTAAAGCAGTGGGTGGTGGCTGAACCTGATACCAAGATCCTACAATTAACTGCAGATATGGAGTTTCTTGTGTTGGCTTCTGATGGACTGTGGGAAGAGGTCAGTAATCAAGAAGCTGTTGATACTGTGACACGTTTTCTTCGAAATGAAGAGAAGATATGCTCCTTGGAAGATGTACAGAACGATATTGATGCGGATTATGGTCAAGTAAACGTAAGTCCATCATCAAAGTTACGAAGAGTTTCACTTGTGAAGCAGTCAAGGGGCAATAGGAGGAACCTGAACGGCTGGAATGAAGTTGGTGAAGATGATTTTGGTTGTGAAAATGAAAGCCCTCCATCGAAATCACGGAGAATTTCATTGGTGAAGCGAGTGAGTATGAAAAAAGAGACGTCAGTTAAAGAAAGCAATATGTGCAAGAAAAGTACCGCATCTAAACTTCTAGTAGCTTGTAAGGAGCTTGTGAACCTTGCTATGAAAAGAGGGGCTTTGGATGATATCACTGTAATGATAATTGATTTAATACATTACAAGCGTAGTACTTGA 1221 0.4398 MATCSSLLPGTHYSSSLKRKRPLNIQIPDVLQEIQAPKLHDSKALKDNVSLSGIGFGVFSVKGKKSCMEDAHKIVSSLESNPKKGFFGVYDGHGGRKAAEFVVENLHANILEMVGNCEESRAKREAVKAGYLKTDEEFLKKGIGSGACCVTALIHGEEIVVSNVGDCRAVLCRSGVAEVLTRDHRAELEDERRRIEEKGGYVEIHRGAWRVHGVLSVSRSIGDAHLKQWVVAEPDTKILQLTADMEFLVLASDGLWEEVSNQEAVDTVTRFLRNEEKICSLEDVQNDIDADYGQVNVSPSSKLRRVSLVKQSRGNRRNLNGWNEVGEDDFGCENESPPSKSRRISLVKRVSMKKETSVKESNMCKKSTASKLLVACKELVNLAMKRGALDDITVMIIDLIHYKRST 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5450g00016 406 ProSitePatterns PPM-type phosphatase domain signature. 86 94 IPR000222 GO:0043169
Pral5450g00016 406 CDD PP2Cc 54 276 IPR001932 -
Pral5450g00016 406 Pfam Protein phosphatase 2C 55 280 IPR001932 -
Pral5450g00016 406 SUPERFAMILY PP2C-like 49 399 IPR036457 -
Pral5450g00016 406 Gene3D - 49 405 IPR036457 -
Pral5450g00016 406 PANTHER PROTEIN PHOSPHATASE 2C 46 398 IPR015655 GO:0004722|GO:0006470
Pral5450g00016 406 SMART PP2C_4 41 397 IPR001932 -
Pral5450g00016 406 ProSiteProfiles PPM-type phosphatase domain profile. 55 399 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5450g00016 Pral-Chr5450 73681 76082 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5450g00016 15 403 PP2C-type Phosphatase Gene Family AT1G67820 54.430 4.76e-133 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5450g00016 - - pcin:129320141 664.84