Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5450g00012 ATGGAGATGGACTACGTGACCGGGTTTCCTCACTCTCACGTGGATCGGCGTCCCAGGAAAAGGGCCAAATTAGCTTGGGAATTTCCTCAAACCCACTCCAAGGCTTATTCAGGGATGTGTTATGGACAAGAGGTTGCAAATATGACAAACTTTGGAGCAACAAGGATGCTCCCTGAACACGCTGGCCTATTTGTGAAGGGGTTGGCTGAAAAGAGTTCTCCCCCATGGAGAGATGACGACAAAGATGGACATTACGTATTTGCACTTGGTGACAATTTAACACCCCGATATAAGATCCTCCGAAAAATTGGTGAAGGTACTTTCGGTCAGGTTCTGGAATGTTGGGATAGAGAAATGAGGGTGCTGGTGGCTATAAAGGTTGTTCGAAGTATTAAGAAATACCGTGAAGCAGCAATGGTAGAAGTTGATGTGCTTCAGTTACTTGGGAAGTATGACAGGATTGGGAGTCGCTGTGTTCAAATACGGAACTGGTTTGACTATCGTAACCATATCTGTATTGTATTTGAGATGCTTGGACCAAGCTTATATGATTTTCTACGGAAGAACAATTATCGCCCATTTCCAGTTGATCTTGTCCGTGAGCTAGGCAGACAACTGTTGGAATGTGTAGCATTTATGCATGATTTGCGTCTCATCCACACCGACTTGAAACCTGAGAACATACTTTTTGTTTCCCCAGAATATGTAAAAGTACCTGACTACAAGGTTACATCTCGGACACCAAAAGAGGGAACCTTTTATAAGAGACTGCCAAAGTCAAGTGCTATCAAGGTCATTGATTTTGGCAGCACAGCCTATGAGCACCAAGATCACAATTACATTGTCTCTACTAGGCATTATCGGGCACCTGAGGTTATTCTTGGACTTGGGTGGAGTTTCCCTTGTGACATATGGAGTGTTGGATGCATTTTGGTAGAGTTATGCTCGGGAGAGGCCTTGTTTCAGACGCATGAGAATTTAGAGCACCTAGCTATGATGGAGAGGGTTTTAGGCCCAATGCCTGTGCACATGTTGAAAAGAGCAGACCGGCATGCAGAGAAGTTTGTCAGAAGGAGTAGACTGAACTGGCCAGAGGGGGCAGTCTCTCGAGAAAGCATCAAAGCTGTATTGAAACTACCACGTCTTCCTGTCTAA 1155 0.4485 MEMDYVTGFPHSHVDRRPRKRAKLAWEFPQTHSKAYSGMCYGQEVANMTNFGATRMLPEHAGLFVKGLAEKSSPPWRDDDKDGHYVFALGDNLTPRYKILRKIGEGTFGQVLECWDREMRVLVAIKVVRSIKKYREAAMVEVDVLQLLGKYDRIGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVRELGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYVKVPDYKVTSRTPKEGTFYKRLPKSSAIKVIDFGSTAYEHQDHNYIVSTRHYRAPEVILGLGWSFPCDIWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPMPVHMLKRADRHAEKFVRRSRLNWPEGAVSRESIKAVLKLPRLPV 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5450g00012 384 SUPERFAMILY Protein kinase-like (PK-like) 84 366 IPR011009 -
Pral5450g00012 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Pral5450g00012 384 SMART serkin_6 97 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5450g00012 384 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 2 382 - -
Pral5450g00012 384 ProSiteProfiles Protein kinase domain profile. 97 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5450g00012 384 Pfam Protein kinase domain 97 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5450g00012 384 Gene3D Transferase(Phosphotransferase) domain 1 151 371 - -
Pral5450g00012 384 Gene3D Phosphorylase Kinase; domain 1 84 177 - -
Pral5450g00012 384 ProSitePatterns Protein kinases ATP-binding region signature. 103 133 IPR017441 GO:0005524
Pral5450g00012 384 CDD PKc_CLK 84 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5450g00012 Pral-Chr5450 45235 49488 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5450g00012 264 358 EF-hand Containing Proteins AT5G22840 39.604 7.42e-16 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Pral5450g00012 Pkinase 3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5450g00012 K08287 - qsa:O6P43_023145 697.197