Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral544g00009 ATGGCCATCCTTCTTTGTGCGCATGTTTATAGTTATACCATTATGGTTCTATTGTTGTCTTCGTTATTAGCCACTGCTGTTGATATTATTACACAATCTCAGCCACTGGTTGACGGCGGAACAACCACCTTGGTGTCTGAAAATGGAAAGTTCGAGCTAGGTTTTTTCAGCCCAGGTAGTTCCACAAACCGATACATCGGAATCTGGTTCAAGAACATCCCAACTAGAAGGATTGTTTGGGTTGCCAACCGTGAAAAACCAGTCAAAGGTAATTCAGGGAAGCTGAGCATTAACACAGAAGGAAACCTTGTGCTTCTAAGCCAGAACGAGACTGTTGTTTGGTTAGCAAATTCAACCAAAAAAGCTTCAAGTCCAATCGTACAACTTCTAGACTCTGGAAATTTGGTTCTGAAGGATGAACAAGACCAGATCAGTCCACAAAACTACTTGTGGCAGAGTTTTGATTATCCTTCTGATACTCTTTTGCCAGGAATTAAGTTTGGATGGGACCTTAGAACTGGTCTTAATCGACATTTAACGGCATGGAAAAGTTGGGATGATCCTTCTCCAGGAGACTTCAGAAGTGAACTCATGCTTCACAATTTACCAGAAATGGTCTTATGGGAAGGCTCCACAGAGTATCACAGAAGTGGCCCATGGAATGGTCTTGATTTTAGTGGCACTCCTACAACGATGGAAGAATTAGTTCATAATAACTTAACATTGGTTTCCAATGAAGACGAGGTTTATTTCATATACACTCCCGACAATGAGTCAGAGGTTTCTATAAGAGTTTTAAACCAAACAAAGCACGCTTTGCAGAGGCTTGTGTGGATTGAAGATGGAAAAACATGGAAATCTTTTGGTGATATACCAAGAGATAATTGTGAAATATATAATCTTTGTGGTGCATTTGGAAATTGCATCATCGTTGATACAGCTATATGCCAGTGCTTGAAGGGATTCAAGCCAAAATCACCCAAAAACTGGGAAATGTTTGATTGGACAGGAGGGTGTGTTCACAGTGAACTATGGAGCTGTAAGGTGAAAGGTAAAGACAGTTTCCTTAAATTTAGTGGCCTGAAATTACCAGATATTACAAAATCTTGGGTCAATACAAGTATGACACTTGAGGAGTGCAAAGCCAAATGTTGGGAAAATTGTTCTTGTACTGCTTATGCTAATTCGGATATCAGAAGAGGAGGTAGTGGTTGTGTCATGTGGTTTGGTAATCTTACTGATATGAAACAAATGTCAAATGATGTTGGTCAAGATTTGTATATTCGAATTGCTTCTGCAGAACTAGCTAACCATGAAGGTAATAATGAATACAATATAAAGATAATTGTGATCTCAGTTACCGTTTCTGGAGTTCTTGTGATGCTTCTCACATTCTATATTTATAGGAGCAAAAGAAAACCTAAAGCAAATAACGATGAAAGCTCGGAAGAAGATTTGGAGCTTCCTCTCTTTGACTTTACAATAATAGCTAATGCTACGCATAACTTCTCCATTGACAATATGCTTGGACAAGGTGGTTTTGGACCAGTATACAAGGGTATATTAAATGATGGACAAGAGATTGCTATCAAGAGACTATCACAGAACTCTCACCAAGGAATGGAAGAATTCAAGAATGAAGTTATATTATGTGCCAAACTTCAACATCGTAATCTAGCTAAAGTTCTTGGATGTTGCATCCAAGGAGAGGAGAAAATGCTGATATATGAGTACATGCCTAATAAGAGTTTGGATTTGTTTATTTTTGGCTCTTCTACCCAAACTACACCTCTAAATTGGTCACAACGATTTTACATTATATGTGGGATTGCTAGAGGTCTTTTGTATCTTCATCAGGATTCAAGATTAAGAATTATTCACAGAGATCTTAAAGCAAGTAATATATTACTTGACAATGAATTGAATCCAAAGATCTCCGATTTTGGTTTGGCAAAGATTTTTGGAAGAGATCAAATTGAAGAGAATACAAAGAGAATTGTTGGCACATATGGTTATATGGCACCTGAATATGCAATCTATGGGTTATTTTCTACAAAATCTGATGTATTCAGTTTTGGAATATTACTACTGGAGATAGTGAGTGGAAAGAAAAACAGAGGATTCTCCTCACCAAACCAAAGTCTCAATCTTGTTGGACATGCATGGAGGTTGTGGAAGGAAGGAATCCCAAATAAATTCATTGATGCAAATGTGGAAGAATCTTGTATTGAACTAGAAGTATTACGATGCCTTCATATTGGTCTTCTTTGTGTGCAACACAATCCTAATGACAGACCAAACATGGCATCTGTGGTTGTGATGTTAAGTAGTGAGGGTGACTTGCCTCAACCTAAAGAGCCTGGTTTCCTCTTGGAATATATCCCAATCAATGCAGAATCATATAATTGCAATCACACAATAGATTCAATGAATAGAATTTCCATCACTGAATTAGAGCCCAGATAA 2466 0.3783 MAILLCAHVYSYTIMVLLLSSLLATAVDIITQSQPLVDGGTTTLVSENGKFELGFFSPGSSTNRYIGIWFKNIPTRRIVWVANREKPVKGNSGKLSINTEGNLVLLSQNETVVWLANSTKKASSPIVQLLDSGNLVLKDEQDQISPQNYLWQSFDYPSDTLLPGIKFGWDLRTGLNRHLTAWKSWDDPSPGDFRSELMLHNLPEMVLWEGSTEYHRSGPWNGLDFSGTPTTMEELVHNNLTLVSNEDEVYFIYTPDNESEVSIRVLNQTKHALQRLVWIEDGKTWKSFGDIPRDNCEIYNLCGAFGNCIIVDTAICQCLKGFKPKSPKNWEMFDWTGGCVHSELWSCKVKGKDSFLKFSGLKLPDITKSWVNTSMTLEECKAKCWENCSCTAYANSDIRRGGSGCVMWFGNLTDMKQMSNDVGQDLYIRIASAELANHEGNNEYNIKIIVISVTVSGVLVMLLTFYIYRSKRKPKANNDESSEEDLELPLFDFTIIANATHNFSIDNMLGQGGFGPVYKGILNDGQEIAIKRLSQNSHQGMEEFKNEVILCAKLQHRNLAKVLGCCIQGEEKMLIYEYMPNKSLDLFIFGSSTQTTPLNWSQRFYIICGIARGLLYLHQDSRLRIIHRDLKASNILLDNELNPKISDFGLAKIFGRDQIEENTKRIVGTYGYMAPEYAIYGLFSTKSDVFSFGILLLEIVSGKKNRGFSSPNQSLNLVGHAWRLWKEGIPNKFIDANVEESCIELEVLRCLHIGLLCVQHNPNDRPNMASVVVMLSSEGDLPQPKEPGFLLEYIPINAESYNCNHTIDSMNRISITELEPR 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral544g00009 821 Pfam PAN-like domain 347 415 IPR003609 -
Pral544g00009 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 579 783 - -
Pral544g00009 821 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 766 - -
Pral544g00009 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 467 578 - -
Pral544g00009 821 CDD B_lectin 33 157 IPR001480 -
Pral544g00009 821 SMART serkin_6 503 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral544g00009 821 Gene3D Hepatocyte Growth Factor 346 431 - -
Pral544g00009 821 Gene3D - 21 154 IPR036426 -
Pral544g00009 821 ProSiteProfiles PAN/Apple domain profile. 347 431 IPR003609 -
Pral544g00009 821 Pfam Protein tyrosine and serine/threonine kinase 505 773 IPR001245 GO:0004672|GO:0006468
Pral544g00009 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Pral544g00009 821 PIRSF SRK 1 821 IPR024171 GO:0004674
Pral544g00009 821 SMART ntp_6 350 430 IPR003609 -
Pral544g00009 821 CDD STKc_IRAK 509 775 - -
Pral544g00009 821 ProSiteProfiles Bulb-type lectin domain profile. 27 150 IPR001480 -
Pral544g00009 821 Pfam D-mannose binding lectin 78 183 IPR001480 -
Pral544g00009 821 Gene3D Phosphorylase Kinase; domain 1 476 578 - -
Pral544g00009 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 188 IPR036426 -
Pral544g00009 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 154 - -
Pral544g00009 821 ProSiteProfiles Protein kinase domain profile. 503 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral544g00009 821 Gene3D Transferase(Phosphotransferase) domain 1 579 782 - -
Pral544g00009 821 SUPERFAMILY Protein kinase-like (PK-like) 485 780 IPR011009 -
Pral544g00009 821 CDD PAN_AP_plant 346 431 - -
Pral544g00009 821 Pfam S-locus glycoprotein domain 216 326 IPR000858 GO:0048544
Pral544g00009 821 SMART blect_4 35 157 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral544g00009 Pral-Chr544 18872 22144 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral544g00009 445 792 Receptor kinase-like Gene Family AT4G23230 52.676 9.67e-126 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral544g00009 PK_Tyr_Ser-Thr 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral544g00009 - - gmx:112998545 1008.05