Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral544g00005 ATGGCCATTCTTCTTCCTCTCATCCTCGCTTTCATCATTTCATGCTCACTTTCTTCTGCAACTGATACTCTTACGCAGTCTCATTCACTTGTTGATGACGCAAACGGAACCACCACCTTGGTGTCCAGCGACGGAACCTTCGAACTCGGTTTCTTCTCCCCCGGCTCTTCCTCAAACCGCTACCTTGGCATCTGGTACAAAAATATCCCTGATACGACCGTCGTCTGGGTGGCCAACCGCCAAACGCCGCTCAGGAACGACACCAACTTCACAACGCCGAGTCGTTTGAGCATAACCGACGAGGGAGGTCTTGTGCTCCTCAGCCAAAACGGCACCGTGGTTTGGTCGGCAAACACGACGGTGAACAATCAAGGCGTAAGTGTTGTTGCGCAGCTTTTGGATTCAGGGAACTTGGTTCTGAGAAATGCACAGGATGAGGTTGATGTTGTTGATGATGCGAAGTATATATGGCAGAGTTTTGATTATCCGAGCGATACGTTTTTGCCTGGAATGAAGATTGGGTGGGATCTGAGAAGAGGGATTAACAGGGAATTGACGGCGTGGAAAAGTTGGGACGATCCTTCTGTCGGAGACTTGAGATGGGGTATGGTGGTCGGAGTGACGCCGGAGCTGGTGATGTGGAAGGGAGAAGAAGAGTATTATCGGAGTGGTCCTTGGAATGGAGTTATTTTCAGTGGGAAAACTACGCCAATCTTTGAGCTTCAGTTCGTCTCTACTCAAGATGAGAAAGATGCCAGTCTATGTCACGTGTATCATATTACCGTCTCATTGATTCGGCCGAACAAAGTGGTTTACACTTCCAAGCTGCAGAACAAATCGGTGATCACAAGGGTTGTATTGAACGGAACTACTTCTTATCGTCAGCGCTATAACTGGGTTGAGCAAACTAAAAGCTGGAGGCTTTACTCATCTGTGCCCAGAGATAATTGTGACAACTACAATCTCTGTGGCCCCTATGGAAATTGCATAGTTAATGACTCTCCCCCCTGCCAGTGTCTCTCAGGGTTCAAGCCAAAATCACCCCAAAACTACAGTGCTTTGGACTGGACCCAGGGATGTGTTCGCAGTGAATCTTGGAGCTGTGGGGTAAAAAATAGAGATGGGTTTCGAAGATTCAGTGGGTTGAAAATTCCTGACACTAGAAAAGCTTGGGTTAATGCAAGCATGACACTTGGGGATTGCAGAATGAAATGCTTGGCAAATTGTTCCTGTACTGCTTATGCAAACTTGTATGTTACTGGGGGAGGTATTGGGTGTTTGATTTGGTTTGGTGAACTTATTGATTTGAGAGTGGCTTCCACTCCTGGGCAAGATCTATATATTCGAATGGCTGCCGCGGAAACTGATGCAAAAGGGCACAAGAAAATGGTAGGCATTGTGGTGACAGCGGTTACTGTTCCATTGGTTTTTCTGGCGCTTTTGGCTCTCTCTTGCACTCATTGGAGGAAAAGAGGGCGCAGAGAGAAAACCTCCCTAGAGAATAACAGTGAAGGTGAACAAGAGGACTTAGACCTGCCATTCTACGACCTTGCTACAATTGTCCATGCCACTAATGACTTCTCAAATGACAAGAAGCTTGGCCAAGGTGGTTTTGGACCAGTATACAAGGGTATTTTAGCAGATGGACAAGAGATTGCTATCAAGAGGCTATCACAGAGCTCTGGACAAGGAACGAAAGAATTTAAGAATGAAGTGTCATTGTGTGCAAAACTTCAACACCGAAATCTTGTCAAGGTTCTTGGTTGTTGCATCCAAGGAGAAGAGAAGATGCTCATCTATGAATACATGCCCAACAAAAGCCTAGACAACTTTTTATTTGATTCCAGGCAGAGCAAATTCCTAGACTGGCCAAGGCGCTTTCATATCATATTTGGAATTGCTCGAGGGCTTCTCTATCTTCACCAAGATTCTAGATTACGGATTATACATAGAGATCTTAAAGCAAGTAACATTTTGTTAGATGGGCAGATGAACCCGAAAATTTCAGATTTTGGCATGGCAAGAATGTTTGGTGGTGATCAAATTGAAGGGAATACAAATAGAATAGCTGGTACCTATGGTTATATGTCACCAGAATATGCCATTCATGGGTTATTCTCCATTAAATCGGATGTGTTTAGCTTTGGCATGTTATTATTGGAAATAGTAAGTGGAAAGAAAAACCGAGGAGCTTCTTATCCAAACCAGGGTTTTAACCTTATTGGACATGCATGGAGACTGTGGAAGGATGGCAACCCACTGGAATTAATTGATGGCTGTTTGGGGGAAGCTTTTAACTCATCAGAAGCACTGCGCTGTATTCGGGTTGGTCTTCTGTGTATGCAACTGCATCCTGAGGATAGGCCAGACATGGCCTCAGTAATTGTGATGTTGAGTAGTGAGAATGTGTTGTCTCAGCCTAAGGAGCCTGGTTTCTTGATAGAGAGGATTATGGTGGGAGAGGGATGTGCTTCTTCTGGCAACCAGATATCTTCTTCAACTAATGAAGTAACTGTGACTCAGTTGGAGGCCAGATAA 2538 0.4507 MAILLPLILAFIISCSLSSATDTLTQSHSLVDDANGTTTLVSSDGTFELGFFSPGSSSNRYLGIWYKNIPDTTVVWVANRQTPLRNDTNFTTPSRLSITDEGGLVLLSQNGTVVWSANTTVNNQGVSVVAQLLDSGNLVLRNAQDEVDVVDDAKYIWQSFDYPSDTFLPGMKIGWDLRRGINRELTAWKSWDDPSVGDLRWGMVVGVTPELVMWKGEEEYYRSGPWNGVIFSGKTTPIFELQFVSTQDEKDASLCHVYHITVSLIRPNKVVYTSKLQNKSVITRVVLNGTTSYRQRYNWVEQTKSWRLYSSVPRDNCDNYNLCGPYGNCIVNDSPPCQCLSGFKPKSPQNYSALDWTQGCVRSESWSCGVKNRDGFRRFSGLKIPDTRKAWVNASMTLGDCRMKCLANCSCTAYANLYVTGGGIGCLIWFGELIDLRVASTPGQDLYIRMAAAETDAKGHKKMVGIVVTAVTVPLVFLALLALSCTHWRKRGRREKTSLENNSEGEQEDLDLPFYDLATIVHATNDFSNDKKLGQGGFGPVYKGILADGQEIAIKRLSQSSGQGTKEFKNEVSLCAKLQHRNLVKVLGCCIQGEEKMLIYEYMPNKSLDNFLFDSRQSKFLDWPRRFHIIFGIARGLLYLHQDSRLRIIHRDLKASNILLDGQMNPKISDFGMARMFGGDQIEGNTNRIAGTYGYMSPEYAIHGLFSIKSDVFSFGMLLLEIVSGKKNRGASYPNQGFNLIGHAWRLWKDGNPLELIDGCLGEAFNSSEALRCIRVGLLCMQLHPEDRPDMASVIVMLSSENVLSQPKEPGFLIERIMVGEGCASSGNQISSSTNEVTVTQLEAR 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral544g00005 845 CDD PAN_AP_plant 367 451 - -
Pral544g00005 845 Gene3D - 16 160 IPR036426 -
Pral544g00005 845 SUPERFAMILY Protein kinase-like (PK-like) 511 802 IPR011009 -
Pral544g00005 845 ProSiteProfiles PAN/Apple domain profile. 368 451 IPR003609 -
Pral544g00005 845 Gene3D Phosphorylase Kinase; domain 1 486 602 - -
Pral544g00005 845 CDD B_lectin 39 163 IPR001480 -
Pral544g00005 845 ProSiteProfiles Protein kinase domain profile. 527 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral544g00005 845 SMART ntp_6 371 450 IPR003609 -
Pral544g00005 845 PIRSF SRK 1 845 IPR024171 GO:0004674
Pral544g00005 845 Pfam Protein tyrosine and serine/threonine kinase 529 795 IPR001245 GO:0004672|GO:0006468
Pral544g00005 845 CDD STKc_IRAK 533 798 - -
Pral544g00005 845 Pfam PAN-like domain 368 436 IPR003609 -
Pral544g00005 845 SMART serkin_6 527 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral544g00005 845 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 194 IPR036426 -
Pral544g00005 845 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 17 160 - -
Pral544g00005 845 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 789 - -
Pral544g00005 845 Pfam S-locus glycoprotein domain 221 347 IPR000858 GO:0048544
Pral544g00005 845 Gene3D Transferase(Phosphotransferase) domain 1 603 809 - -
Pral544g00005 845 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 603 806 - -
Pral544g00005 845 ProSiteProfiles EGF-like domain profile. 313 349 IPR000742 -
Pral544g00005 845 Pfam D-mannose binding lectin 73 189 IPR001480 -
Pral544g00005 845 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 491 602 - -
Pral544g00005 845 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Pral544g00005 845 SMART blect_4 31 163 IPR001480 -
Pral544g00005 845 ProSiteProfiles Bulb-type lectin domain profile. 21 153 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral544g00005 Pral-Chr544 8542 13805 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral544g00005 456 825 Receptor kinase-like Gene Family AT4G23190 54.354 1.56e-133 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral544g00005 PK_Tyr_Ser-Thr 3.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral544g00005 - - gmx:100790436 1021.92