Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral544g00004 ATGGCCATTCTTCTTCCTCTCATCCTCGCTTTCATCATTTCATGCTCACTTTCTTCTGCAACTGATACTCTTACGCAGTCTCATTCACTTGTTGATGACGCAAACGGAACCACCACCTTGGTGTCCAGCGACGGAACCTTCGAACTCGGTTTCTTCTCCCCCGGCTCTTCCTCAAACCGCTACCTTGGCATCTGGTACAAAAATATCCCTGATACGACCGTCGTCTGGGTGGCCAACCGCCAAACGCCGCTCAGGAACGACACCAACTTCACAACGCCGAGTCGTTTGAGCATAACCGACGAGGGAGGTCTTGTGCTCCTCAGCCAAAACGGCACCGTGGTTTGGTCGGCAAACACGACGGTGAACAATCAAGGCGTAAGTGTTGTTGCGCAGCTTTTGGATTCAGGGAACTTGGTTCTGAGAAATGCACAGGATGAGGTTGATGTTGTTGATGATGCGAAGTATATATGGCAGAGTTTTGATTATCCGAGCGATACGTTTTTGCCTGGAATGAAGATTGGGTGGGATCTGAGAAGAGGGATTAACAGGGAATTGACGGCGTGGAAAAGTTGGGACGATCCTTCTGTCGGAGACTTGAGATGGGGTATGGTGGTCGGAGTGACGCCGGAGCTGGTGATGTGGAAGGGAGAAGAAGAGTATTATCGGAGTGGTCCTTGGAATGGAGTTATTTTCAGTGGGAAAACTACGCCAATCTTTGAGCTTCAGTTCGTCTCTACTCAAGATGAGAAAGATGCCAGTCTATGTCACGTGTATCATATTACCGTCTCATTGATTCGGCCGAACAAAGTGGTTTACACTTCCAAGCTGCAGAACAAATCGGTGATCACAAGGGTTGTATTGAACGGAACTACTTCTTATCGTCAGCGCTATAACTGGGTTGAGCAAACTAAAAGCTGGAGGCTTTACTCATCTGTGCCCAGAGATAATTGTGACAACTACAATCTCTGTGGCCCCTATGGAAATTGCATAGTTAATGACTCTCCCCCCTGCCAGTGTCTCTCAGGGTTCAAGCCAAAATCACCCCAAAACTACAGTGCTTTGGACTGGACCCAGGGATGTGTTCGCAGTGAATCTTGGAGCTGTGGGGTAAAAAATAGAGATGGGTTTCGAAGATTCAGTGGGTTGAAAATTCCTGACACTAGAAAAGCTTGGGTTAATGCAAGCATGACACTTGGGGATTGCAGAATGAAATGCTTGGCAAATTGTTCCTGTACTGCTTATGCAAACTTGTATGTTACTGGGGGAGGTATTGGGTGTTTGATTTGGTTTGGTGAACTTATTGATTTGAGAGTGGCTTCCACTCCTGGGCAAGATCTATATATTCGAATGGCTGCCGCGGAAACTGATGCAAAAGGGCACAAGAAAATGGTAGGCATTGTGGTGACAGCGGTTACTGTTCCATTGGTTTTTCTGGCGCTTTTGGCTCTCTCTTGCACTCATTGGAGGAAAAGAGGGCGCAGAGAGAAAACCTCCCTAGAGAATAACAGTGAAGGTGAACAAGAGGACTTAGACCTGCCATTCTACGACCTTGCTACAATTGTCCATGCCACTAATGACTTCTCAAATGACAAGAAGCTTGGCCAAGGTGGTTTTGGACCAGTATACAAGGGTATTTTAGCAGATGGACAAGAGATTGCTATCAAGAGGCTATCACAGAGCTCTGGACAAGGAACGAAAGAATTTAAGAATGAAGTGTCATTGTGTGCAAAACTTCAACACCGAAATCTTGTCAAGGTTCTTGGTTGTTGCATCCAAGGAGAAGAGAAGATGCTCATCTATGAATACATGCCCAACAAAAGCCTAGACAACTTTTTATTTGGTCCGTGTATATGCAGAATCTTGTCTTTAGCAGAATGGCAGAGCAAATTCCTAGACTGGCCAAGGCGCTTTCATATCATATTTGGAATTGCTCGAGGGCTTCTCTATCTTCACCAAGATTCTAGATTACGGATTATACATAGAGATCTTAAAGCAAGTAACATTTTGTTAGATGGGCAGATGAACCCGAAAATTTCAGATTTTGGCATGGCAAGAATGTTTGGTGGTGATCAAATTGAAGGGAATACAAATAGAATAGCTGGTACCTATGGTTATATGTCACCAGAATATGCCATTCATGGGTTATTCTCCATTAAATCGGATGTGTTTAGCTTTGGCATGTTATTATTGGAAATAGTAAGTGGAAAGAAAAACCGAGGAGCTTCTTATCCAAACCAGGGTTTTAACCTTATTGGACATGCATGGAGACTGTGGAAGGATGGCAACCCACTGGAATTAATTGATGGCTGTTTGGGGGAAGCTTTTAACTCATCAGAAGCACTGCGCTGTATTCGGGTTGGTCTTCTGTGTATGCAACTGCATCCTGAGGATAGGCCAGACATGGCCTCAGTAATTGTGATGTTGAGTAGTGAGAATGTGTTGTCTCAGCCTAAGGAGCCTGGTTTCTTGATAGAGAGGATTATGGTGGGAGAGGGATGTGCTTCTTCTGGCAACCAGATATCTTCTTCAACTAATGAAGTAACTGTGACTCAGTTGGAGGCCAGATAA 2568 0.4502 MAILLPLILAFIISCSLSSATDTLTQSHSLVDDANGTTTLVSSDGTFELGFFSPGSSSNRYLGIWYKNIPDTTVVWVANRQTPLRNDTNFTTPSRLSITDEGGLVLLSQNGTVVWSANTTVNNQGVSVVAQLLDSGNLVLRNAQDEVDVVDDAKYIWQSFDYPSDTFLPGMKIGWDLRRGINRELTAWKSWDDPSVGDLRWGMVVGVTPELVMWKGEEEYYRSGPWNGVIFSGKTTPIFELQFVSTQDEKDASLCHVYHITVSLIRPNKVVYTSKLQNKSVITRVVLNGTTSYRQRYNWVEQTKSWRLYSSVPRDNCDNYNLCGPYGNCIVNDSPPCQCLSGFKPKSPQNYSALDWTQGCVRSESWSCGVKNRDGFRRFSGLKIPDTRKAWVNASMTLGDCRMKCLANCSCTAYANLYVTGGGIGCLIWFGELIDLRVASTPGQDLYIRMAAAETDAKGHKKMVGIVVTAVTVPLVFLALLALSCTHWRKRGRREKTSLENNSEGEQEDLDLPFYDLATIVHATNDFSNDKKLGQGGFGPVYKGILADGQEIAIKRLSQSSGQGTKEFKNEVSLCAKLQHRNLVKVLGCCIQGEEKMLIYEYMPNKSLDNFLFGPCICRILSLAEWQSKFLDWPRRFHIIFGIARGLLYLHQDSRLRIIHRDLKASNILLDGQMNPKISDFGMARMFGGDQIEGNTNRIAGTYGYMSPEYAIHGLFSIKSDVFSFGMLLLEIVSGKKNRGASYPNQGFNLIGHAWRLWKDGNPLELIDGCLGEAFNSSEALRCIRVGLLCMQLHPEDRPDMASVIVMLSSENVLSQPKEPGFLIERIMVGEGCASSGNQISSSTNEVTVTQLEAR 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral544g00004 855 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 17 160 - -
Pral544g00004 855 Pfam D-mannose binding lectin 73 189 IPR001480 -
Pral544g00004 855 Gene3D - 16 160 IPR036426 -
Pral544g00004 855 CDD PAN_AP_plant 367 451 - -
Pral544g00004 855 ProSiteProfiles EGF-like domain profile. 313 349 IPR000742 -
Pral544g00004 855 Pfam S-locus glycoprotein domain 221 347 IPR000858 GO:0048544
Pral544g00004 855 SMART serkin_6 527 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral544g00004 855 ProSiteProfiles PAN/Apple domain profile. 368 451 IPR003609 -
Pral544g00004 855 PIRSF SRK 1 855 IPR024171 GO:0004674
Pral544g00004 855 CDD B_lectin 39 163 IPR001480 -
Pral544g00004 855 ProSitePatterns Serine/Threonine protein kinases active-site signature. 658 670 IPR008271 GO:0004672|GO:0006468
Pral544g00004 855 SMART ntp_6 371 450 IPR003609 -
Pral544g00004 855 ProSiteProfiles Protein kinase domain profile. 527 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral544g00004 855 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 799 - -
Pral544g00004 855 SUPERFAMILY Protein kinase-like (PK-like) 511 808 IPR011009 -
Pral544g00004 855 Gene3D Phosphorylase Kinase; domain 1 486 602 - -
Pral544g00004 855 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 491 602 - -
Pral544g00004 855 CDD STKc_IRAK 533 808 - -
Pral544g00004 855 Pfam Protein tyrosine and serine/threonine kinase 529 805 IPR001245 GO:0004672|GO:0006468
Pral544g00004 855 Gene3D Transferase(Phosphotransferase) domain 1 603 819 - -
Pral544g00004 855 SMART blect_4 31 163 IPR001480 -
Pral544g00004 855 Pfam PAN-like domain 368 436 IPR003609 -
Pral544g00004 855 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 603 816 - -
Pral544g00004 855 ProSiteProfiles Bulb-type lectin domain profile. 21 153 IPR001480 -
Pral544g00004 855 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 194 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral544g00004 Pral-Chr544 8542 13805 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral544g00004 456 835 Receptor kinase-like Gene Family AT4G23190 53.728 3.09e-131 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral544g00004 PK_Tyr_Ser-Thr 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral544g00004 - - gmx:100790436 1014.6