Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral544g00001 ATGGAGTTGCCTTTCTTTGACGTTGCCACAATTGTTCGTGCCACTAATGATTTCTCAAGTGACAAGAAGCTTGGCCAAGGTGGTTTTGGACCTGTATACAGGGGTACACTGGGAGATGGGCAAGAGATTGCTGTCAAAAGGTTATCTGAGGCATCTAGACAAGGATCGGAAGAATTCAAGAATGAAGTTATAATGTGTGCGAAACTTCAACACCGGAATCTTGTTAAAGTCCTTGGCTGTTGCATTCAAAGAGAGGAGAAAATGCTCATCTATGAATACATGCCCAACAAAAGTTTAGATACCATTCTTTTTGAATGTTCGGAGGAGATCAAATGGAAGGAAATACAAAGAAAGTGA 357 0.409 MELPFFDVATIVRATNDFSSDKKLGQGGFGPVYRGTLGDGQEIAVKRLSEASRQGSEEFKNEVIMCAKLQHRNLVKVLGCCIQREEKMLIYEYMPNKSLDTILFECSEEIKWKEIQRK 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral544g00001 118 ProSiteProfiles Protein kinase domain profile. 18 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral544g00001 118 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 113 - -
Pral544g00001 118 Pfam Protein tyrosine and serine/threonine kinase 20 113 IPR001245 GO:0004672|GO:0006468
Pral544g00001 118 Gene3D Phosphorylase Kinase; domain 1 1 93 - -
Pral544g00001 118 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 93 - -
Pral544g00001 118 SUPERFAMILY Protein kinase-like (PK-like) 3 116 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral544g00001 Pral-Chr544 91 834 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral544g00001 6 117 Receptor kinase-like Gene Family AT4G23140 58.036 2.84e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral544g00001 PK_Tyr_Ser-Thr 2.5e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral544g00001 - - pvu:PHAVU_011G152200g 177.178