Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5448g00002 ATGCTTAGTCCTGAAGGAGAACTTCAAATTAGTTTTGGCTATCAATGTAGTAGTAAAAGAAGTATACCTTGTGAGGTTGCCAAAGGCTATAACATTCTACCTGAAGTAATTCACAGAACAAGCAGTTTCTCTTGCTTGTCTGGTGCAGCCTTGAGTGCAAATGCTACGTTAGCTAACACAAACATCTGCAATGGTGTGATAGGAGAAGAAATACTTCCAACTTGGGACTCACCTAATTCATTCCGCAAGGTACCCTCTTCTCCAAGTCTTTCAAGGTTGGATATATTGTCATCTTCTCTCCACAGTAATTTGTCAAACTTAAGTTGCAGTCCATCCCCTCCAAGTGAAATGCTTGACTATGACTCTTGTACATTAAAACCCATGAGCGCTCCTTCCAAGAGTGAAGGTTTCCTTAATGCCATGGAAGTCCAAGCAGCAGGGGGAGCTGCTGGTGAAGATAGAGTCCAAGCAGTCTGTTCTGAAGAAAATGGCTGGCTCTTTTGTGCAGTTTATGATGGCTTTAATGGTAGAGATGCTGCCGACTTTCTGGCTGGTACTCTGTATGACACCATTGTATCTAACTTTAATATATTGTACTGGGAATCTGAGCCAGATTCCATCAAAGCTTCTAATGATGTGGGTTTGGGTGGATCCTGTAAGTTGGATGATAATCTTATTGTTCATGAGGAGCAATCTCTGTCAAAACTCGAGGGAAACAACAATTCTTATCATGGCTGTTTGGCAAAGAGTAACCTATCTGCTAAGGTAGGAGTGCCTTATAAATCATTTTCAGATGGGGTGCTTGATAGCCTTGAACGCTCTCTTAGCCAGGTTGAGAATGATTTCTTGTACATGGTTGAACAGGAAATGGGGGAACGGCCTGATTTAGTTTCTATTGGATCTTGTGTTTTACTAGTGCTTCTTCATGGGAATGACTTATACACACTTAATTTAGGTGACAGCAAAGCTGTATTAGCAACACGTAATACAAGAGGCAAACTTCAAGCTATCCAGCTCACAGAAAGTCATACAGTTGAAAATGACATTGAAAGAGCTCGACTCCTGGCTGATCACCCAGATGATCCTAAAGTCATTATAGGAGGAAAAGTGAAAGGAAAACTGAAGGTTACTCGTGCTTTAGGAGTAGGTTACTTGAAAAAGAAATGTCTGAATGATGCACTGATGGGAATCCTTCGAGTCCGAGATCTTACAAGCCCTCCATATATTTCCTCTCAACCATCAATGAATGTGCATGAGATCTCAAACTCTGATCAGTTTGTGATAGTAGGAAGTGATGGCTTATTTGACTTCTTTAGTAACGATGAGGCTGTGGAGCTTGTTGAGTCCTATATCTTGAGCAATCCATTTGGTGATCCAGCTAAGTTTCTTATCGAGCAGCTTTTAGCAAGAGCAGCCAATTCCGCAGGTTTCAGCATGGAAGAGTTGATGAATGTTCCGGCTGGGAGGAGGAGGAGGTACCATGATGACGTGACCGTGATTGTGATCATTCTTGGGATGAATCATCGGACTTCAAAGGCATCAACTTTTATCTAA 1554 0.4176 MLSPEGELQISFGYQCSSKRSIPCEVAKGYNILPEVIHRTSSFSCLSGAALSANATLANTNICNGVIGEEILPTWDSPNSFRKVPSSPSLSRLDILSSSLHSNLSNLSCSPSPPSEMLDYDSCTLKPMSAPSKSEGFLNAMEVQAAGGAAGEDRVQAVCSEENGWLFCAVYDGFNGRDAADFLAGTLYDTIVSNFNILYWESEPDSIKASNDVGLGGSCKLDDNLIVHEEQSLSKLEGNNNSYHGCLAKSNLSAKVGVPYKSFSDGVLDSLERSLSQVENDFLYMVEQEMGERPDLVSIGSCVLLVLLHGNDLYTLNLGDSKAVLATRNTRGKLQAIQLTESHTVENDIERARLLADHPDDPKVIIGGKVKGKLKVTRALGVGYLKKKCLNDALMGILRVRDLTSPPYISSQPSMNVHEISNSDQFVIVGSDGLFDFFSNDEAVELVESYILSNPFGDPAKFLIEQLLARAANSAGFSMEELMNVPAGRRRRYHDDVTVIVIILGMNHRTSKASTFI 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5448g00002 517 SMART PP2C_4 128 502 IPR001932 -
Pral5448g00002 517 Pfam Protein phosphatase 2C 285 459 IPR001932 -
Pral5448g00002 517 PANTHER PROTEIN PHOSPHATASE 2C 126 502 IPR015655 GO:0004722|GO:0006470
Pral5448g00002 517 CDD PP2Cc 150 504 IPR001932 -
Pral5448g00002 517 SUPERFAMILY PP2C-like 150 504 IPR036457 -
Pral5448g00002 517 ProSiteProfiles PPM-type phosphatase domain profile. 137 504 IPR001932 -
Pral5448g00002 517 Gene3D - 115 513 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5448g00002 Pral-Chr5448 4421 7076 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5448g00002 4 517 PP2C-type Phosphatase Gene Family AT3G16560 63.218 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5448g00002 - - gmx:100808304 782.711