Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5447g00005 ATGCCGGCTAAGGACTCATATTTGAACACTTCTGATCTCATAGAACCATTTGCTGAAGTTGACCCAACTGGTAGGTTTGGGCGGTACGATGACCTGCTTGGCAGTGGTGCTGTGAAAAAGGTCTATAGGGCCTTTGATCAACAGGAAGGCACAGAGGTAGCCTGGAATCAGGTGCGGCTGAGGAATTTTAGTGAGGACCCTGTGCTTTTAAATCGTCTTCACTCTGAGGTTGAGCTGCTTAGAACATTGAAGAACAAATATATCATTGTCTGTTATAGTGTATGGAAAGATGAAGAGCGGAACACTTTAAATTTCATAACTGAGATATGCACTTCTGGGAATCTGAGGGCCTACAGGAAGAAACATCGTCAAGTATCCATCAAGGCACTGAAGAAGTGGTCAAAACAAGTTCTTGAAGGACTGGAATATCTACATACACATGACCCATGCATTATTCACAGAGATCTCAATTGTAGTAACATTTTCGTAAATGGGAATGTTGGCCAGGTGAAAATTGGTGATCTGGGGCTGGCTGCAATAGTTGGGAAGAGTCACGCAGCACATTCAATTATAGGGACACCAGAGTATATGGCTCCAGAGCTGTATGAGGAGGATTACACTGAGATGGTGGACATATACTCTTTTGGAATGTGTTTGCTTGAGATGGTGACAATGGAGATACCATACAGTGAATGTGACAGCGTAGCCAAGATATACAAGAAGGTAACAACAGGAATAAAGCCTCAGGCTCTAAATAAAGTCACCAACGCAGAGTTGAAGGCGTTCATTGAGAAGTGCATTGCACAACCAAGGGCACGACCTTCAGCCACAGATCTCCTCAAGGATCCTTTCTTTTCTGAACTCAACAACAATGACCAGGGACCACATCCAGACCCAACTGGTTAA 906 0.4393 MPAKDSYLNTSDLIEPFAEVDPTGRFGRYDDLLGSGAVKKVYRAFDQQEGTEVAWNQVRLRNFSEDPVLLNRLHSEVELLRTLKNKYIIVCYSVWKDEERNTLNFITEICTSGNLRAYRKKHRQVSIKALKKWSKQVLEGLEYLHTHDPCIIHRDLNCSNIFVNGNVGQVKIGDLGLAAIVGKSHAAHSIIGTPEYMAPELYEEDYTEMVDIYSFGMCLLEMVTMEIPYSECDSVAKIYKKVTTGIKPQALNKVTNAELKAFIEKCIAQPRARPSATDLLKDPFFSELNNNDQGPHPDPTG 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5447g00005 301 Gene3D Phosphorylase Kinase; domain 1 14 108 - -
Pral5447g00005 301 CDD STKc_WNK 25 285 - -
Pral5447g00005 301 Gene3D Transferase(Phosphotransferase) domain 1 110 291 - -
Pral5447g00005 301 Pfam Protein kinase domain 31 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5447g00005 301 FunFam Probable serine/threonine-protein kinase WNK1 12 108 - -
Pral5447g00005 301 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 17 289 - -
Pral5447g00005 301 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5447g00005 301 FunFam probable serine/threonine-protein kinase WNK9 110 291 - -
Pral5447g00005 301 SUPERFAMILY Protein kinase-like (PK-like) 21 285 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5447g00005 Pral-Chr5447 33284 36021 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5447g00005 15 285 MAP Kinase Kinase Kinase AT5G55560 79.336 5.89e-169 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pral5447g00005 Pkinase 6.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5447g00005 K08867 - pcin:129317768 571.237