Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5447g00002 ATGGTTTCTTCAGACAAAAGTGCTGATCGCAATGTTTCTTCTGATAAATTGCATCAGAGGCTGAGTTCTCAAAGCGATATTACTGTGTCACAAGAGACTTGTGATGATAAAATTGATTCATCCAACCCGGAGGAAGCAAGAAGAATTTCTTCTGTTGCAACTGAGAAAGAAGTGCAGGATTCTGATGCTACCCCTGATGCTCTGCAATCAGATCAAGAAGGAAGTGCATGTACCTCACCACTGCAGAGACCTGTGCAGAGTCCTAATACTGATTATCGCCCATTGCAATCTAGAGAGGAAAGACCACCTGTTATATGTGAAAAGATATCAAAAGACAGTGTAGCCGAAAAAGGAGTGTGGGATTCTGATGCTTCTGCCAATGCACGGAAATCAGAGCAATGGAGCATATGCTCTTTACCACATGTGGAACCCTTGCAGAGTACTAGCACTATTCCACGTGCATTGCACGGTGGTCAGGGTGGTCCCTCTATAGCACGTGAAAAAGTCTCCAAGGATGGATATAACTGGAGAAAATATGGCCAGAAAAATGTTAAGGGCAATGAATATGTAAGGAGCTATTACAAGTGCACACATTCCAACTGCCCAGCGAAGAAGCAATTGGAGCAGTCAAATAACGGACAAATTACAGATACCATTTGCATTGGTCAGCATAATCATCCTCAAGTGAACAGTCCACGAGCTGTCGAAGAAAAATCAAATAAGCCCTCTCTAGCCAACATGGAAGACAAAACATCCATTGGGCATGGATGTGTGCCTCAACCGAACAAGTCTCTAGAAACTCATCCAGTTTCAACAGTTTCCACGGTTGATGAGGTCAAAGCTGCACCTTTACAGTCGACTAGAACAAGGGATGAGGTTCTTGCCAATGAGGATCCTGAGTCAAACGCCTGTACAATATTACTCACAAATTTAATATCAAACAGGAAGAAAAACATTAGCAATGCTGATGCCTCTGGGGCTGAGAAGTCAGTTGGTGAATCTCGTTATGTCGTTCAGACTTCAAGTGAGGTTGATTTTATTAATGATGGATACCGTTGGCGCAAGTACGGGCAGAAACTGGTAAAAGGAAATCCAAATCCAAGAAGTTATTACCGGTGCTCGAGTCCTGGATGCCCTGTCAAAAAGCATGTGGAAAGGGCCTCTCATGATCAAAAAATTGTGATTACCACATATGAGGGACATCATGATCATGAAAGCCCCTCTGGAACGACTGTTATTCATAACGGAGCAGCAGATACTTCCACAACAATCATCGATAGTGACTCAGGAACCAAATCTGGGGAAAACTCTGTTGGTGTTAAACCGGCAGAACAACAGATTTGCTTGCACCTAGAAAGCAGGCCACGGGAGCAACCAAATGGTGAGCAAATTGCTAAGCCAAAGACTTGTGATATGGATGAATCTCAAGGGATCGCTACGGGAGTCTCTGAAAGCCCTTCAAGTGAGAGAGAACAAAATGGCAACACGGGCGCAGGAAATGATTCAGGCGTCCATGGTACCACGTGCCATTCAGGTTCTGAGCTTCCTTGTAGATTAAACAAACAGCAGAAAGAAGAGGTATCAGAAGAAAGTAAGTTAAACAAACGATCTGAACCTGATGCAGATCCTGTCCAAAGCTAA 1641 0.4375 MVSSDKSADRNVSSDKLHQRLSSQSDITVSQETCDDKIDSSNPEEARRISSVATEKEVQDSDATPDALQSDQEGSACTSPLQRPVQSPNTDYRPLQSREERPPVICEKISKDSVAEKGVWDSDASANARKSEQWSICSLPHVEPLQSTSTIPRALHGGQGGPSIAREKVSKDGYNWRKYGQKNVKGNEYVRSYYKCTHSNCPAKKQLEQSNNGQITDTICIGQHNHPQVNSPRAVEEKSNKPSLANMEDKTSIGHGCVPQPNKSLETHPVSTVSTVDEVKAAPLQSTRTRDEVLANEDPESNACTILLTNLISNRKKNISNADASGAEKSVGESRYVVQTSSEVDFINDGYRWRKYGQKLVKGNPNPRSYYRCSSPGCPVKKHVERASHDQKIVITTYEGHHDHESPSGTTVIHNGAADTSTTIIDSDSGTKSGENSVGVKPAEQQICLHLESRPREQPNGEQIAKPKTCDMDESQGIATGVSESPSSEREQNGNTGAGNDSGVHGTTCHSGSELPCRLNKQQKEEVSEESKLNKRSEPDADPVQS 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5447g00002 546 MobiDBLite consensus disorder prediction 451 546 - -
Pral5447g00002 546 MobiDBLite consensus disorder prediction 17 36 - -
Pral5447g00002 546 MobiDBLite consensus disorder prediction 63 93 - -
Pral5447g00002 546 FunFam WRKY transcription factor 57 333 407 - -
Pral5447g00002 546 SUPERFAMILY WRKY DNA-binding domain 167 228 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5447g00002 546 FunFam WRKY transcription factor 162 230 - -
Pral5447g00002 546 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 82 425 IPR044810 GO:0003700
Pral5447g00002 546 MobiDBLite consensus disorder prediction 1 105 - -
Pral5447g00002 546 ProSiteProfiles WRKY domain profile. 342 407 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5447g00002 546 SUPERFAMILY WRKY DNA-binding domain 339 407 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5447g00002 546 MobiDBLite consensus disorder prediction 421 440 - -
Pral5447g00002 546 SMART WRKY_cls 170 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5447g00002 546 SMART WRKY_cls 347 406 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5447g00002 546 MobiDBLite consensus disorder prediction 37 62 - -
Pral5447g00002 546 Gene3D WRKY domain 334 400 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5447g00002 546 Pfam WRKY DNA -binding domain 171 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5447g00002 546 Pfam WRKY DNA -binding domain 348 405 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5447g00002 546 MobiDBLite consensus disorder prediction 246 269 - -
Pral5447g00002 546 MobiDBLite consensus disorder prediction 519 539 - -
Pral5447g00002 546 MobiDBLite consensus disorder prediction 476 518 - -
Pral5447g00002 546 Gene3D WRKY domain 163 229 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5447g00002 546 ProSiteProfiles WRKY domain profile. 165 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5447g00002 Pral-Chr5447 10862 17652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5447g00002 157 461 WRKY Transcription Factor Family AT2G04880 44.839 3.69e-77 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5447g00002 WRKY 1.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5447g00002 K18834 - gmx:100781219 415.231