Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5447g00001 ATGCAAGCATCCGAACGTCATAGAAGTTCAAGCATGCACTATCAACTGATGCAACAAACTGAGGCCTACTGCTTACCGCAGTATCAAGCGCTATACGGAAATGACATTAGAAGCCATGGGACCCACTTTTCTACTCCATGTTCTTCTGAACTCTATTGCACATTGGAGTCCTCCTCTGCGACTGGGATTTTCCATGTTTATGACTCGCCTTCAACTGTCAGTTTCTCGCCTAGTGGGAGCCCAATCTCGCAGCAAGATTCTAAATCATACTCGTACCCATCTGATCAACATCAGTCTCCAGACAATACTTACAGCTCTCCAATGAGTGGTTCCTGTGTAACTGATGATTTGCATAGCTTCCAGCACAAATTGCGAGAGCTGGAAAGTGTAATGTTTGGCCCTGACTCTGATAATATTGATAGCTATGACAGCACCATCAAGGAAGGAATTAACTTTCTTTGGCCTGAAATGGATGGCTGGAGGCAAACAATGGCGGTAATTTCTAGTAAGGACCTGATACAGGTTCTAGTCGCATGTGCAAAAGCCGTTTCAGATAATGATTTGTTAATGGCTCAATGTTTGATGGATGAATTACGCCAAATGGTGTCAGTTTCTGGTGAACCAATTCATAGGTTGGGAGCATATATGTTGGAAGGGCTTGTAGCTCGATTGTCTGCCTCGGGGAGTTCAATCTACAAGGCTTTAAGATGCAAAGAACCGGCGAGTGTTGAGCTTCTCTCATATATGCACATACTTTACGAGGTCTGCCCCTACTTCAAATTTGGTTACATGTCTGCAAATGGAGCCATTGCTGAAGCTATGAAAGAGGAGAGAGTTCATATTATTGATTTCCAAATTGCTCAGGGAAGCCAATGGATTACTTTGATTCAGGCTTTTGCTGCTAGACCTGGGGGACCACCCCACATCCGAATTACAGGTATTGATGATTCTACATCAGCTTATGCTCGTGGAGGAGGACTAAACATAGTGGGAAAGAGACTATCAAAGTTGGCTGAGAAATTCAACGTGCCATTTGAATTTCATGCTGCAGCTATCTCTGGCTGTAATGTTCAGCTGCATAATCTCGGGGTTCGACCAGGGGAGGCTCTCGCTGTGAATTTCGCATTCATGCTACATCACATGCCTGACGAAAGTGTCAGCACCGAGAATCACCGTGATCGACTGCTGCGCTTGGTGAAGAGCTTGTCTCCGAAGGTGGTGACACTTGTTGAGCAAGAATCAAATACAAACACTGCACCTTTCCTCCCTCGCTTCCTCGAAGCTCTGGACTACTACAAAGCTATGTTCGAGTCGATTGATGTGACTCTTCCCAGAGATCACAAAGAGCGAATTAATGTGGAGCAGCATTGCTTGGCGAGAGATGTTGTTAACATCATAGCTTGTGAAGGAGTCGAGAGGGAGCGGCACGAGGTGCTCGGCAAGTGGAGGGCCAGATTTGCAATGGCTGGTTTCACGCCTTACCCTCTGAGCTCATTGGTGAATAGTACCATTAAGAAGCTGCTTGAGAATTATTCTGATAGATATACACTTCAAGAAAGAGATGCTCTCTATCTGGGTTGGATGAATAGAGATTTAGTAGCTTCTTGTGCTTGGAAGTGA 1620 0.4519 MQASERHRSSSMHYQLMQQTEAYCLPQYQALYGNDIRSHGTHFSTPCSSELYCTLESSSATGIFHVYDSPSTVSFSPSGSPISQQDSKSYSYPSDQHQSPDNTYSSPMSGSCVTDDLHSFQHKLRELESVMFGPDSDNIDSYDSTIKEGINFLWPEMDGWRQTMAVISSKDLIQVLVACAKAVSDNDLLMAQCLMDELRQMVSVSGEPIHRLGAYMLEGLVARLSASGSSIYKALRCKEPASVELLSYMHILYEVCPYFKFGYMSANGAIAEAMKDXERVHIIDFQIAQGSQWITLIQAFAARPGGPPHIRITGIDDSTSAYARGGGLNIVGKRLSKLAEKFNVPFEFHAAAISGCNVQLHNLGVRPGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTAPFLPRFLEALDYYKAMFESIDVTLPRDHKERINVEQHCLARDVVNIIACEGVERERHEVLGKWRARFAMAGFTPYPLSSLVNSTIKKLLENYSDRYTLQERDGXLYLGWMNRDLVASCAWK 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5447g00001 541 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 125 535 IPR005202 -
Pral5447g00001 541 MobiDBLite consensus disorder prediction 75 108 - -
Pral5447g00001 541 Pfam GRAS domain family 172 541 IPR005202 -
Pral5447g00001 541 ProSiteProfiles GRAS family profile. 163 541 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5447g00001 Pral-Chr5447 3474 6788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5447g00001 110 541 GRAS Transcription Factor Family AT5G48150 77.221 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral5447g00001 GRAS 2.1e-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5447g00001 - - gmx:100808300 897.116