Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5444g00032 ATGACAGGTGAGAGCGACCACGTAGAGATTAATGGTGACAAAAACCCATTTTTGTTTTCTGCGACTAAGGTGGCTGACGGTTTTGGCAAGATGCTCGTCACTTCCGTTGGTACGAACACAACATGGGGTCAAATGATGGGTTCCATAAGCAGAGACAACAATGAACAAACTCCTCTGCAAGAACGCCTCAATAAGCTTACTTCTGCCATTGGCAAGGTTGGCTTGGCAGTGGCTTTTCTTGTTCTTCTTGTTATGTTAGTTCGCTACTTCACAGGGAACACAACTGATGAGAATGGGAATAAGGAGTTCAAGGGAAGCAGCACCAAGTTTGATGACATAATGAATGGAGTTGTGGGAATTGTTGCTGCTGCTGTTACCATTGTCGTGGTCGCGATTCCAGAAGGGCTTCCATTGGCTGTGACATTGACCCTTGCTTATTCCATGAAGAAGATGATGGCTGATATGGCTATGGTGAGGAAGCTCTCTGCCTGCGAGACAATGGGGTCGGCCACAACCATTTGCACTGATAAGACTGGCACACTCACGCTTAATGAGATGAAAGTGACAAGATTCTGGCCTGGACAGCAACCTATGGAAGAGGAACCTTATCAATCATCAGTTCATTCGGATGTCCAACAACTAATCAAAGAAGGGGTTGCCTTTAACACCACAGGTAGTGTTTACAAGTCTAAAACAAAACATTCTGACTATGAATTTTCAGGTAGTCCAACAGAAAAAGCTATTCTTTCATGGGCTGTTCTTGATTTGGGCATGAACATGGTGGAATTAACGCAAAGTTTTACCATCCTTCATGTGGAGGCCTTCAATTCAAAGAAGAAGAGGAGTGGGGTTTTGATTAAAAGGAAGGCAGACAACAAAATCCATGCACATTGGAAAGGAGCAGCTGAAATGGTGCTTAGGTTGTGTTCAAAGTACTATGATGCTTCTGGCAATATGAAAGAACTTGATGACAACAAAAAGCTAGTCTTTGAGCAAATCATTCAAGGGATGGCGGCCAGCAGCCTTAGGTGTATTGCTTTTGCACATACAGAAGTAGCTGAAGAAGATGATAGAGGAATCAAAGATGTAAGAGAAGAAGGGCTCACCCTCTTAGGACTTGTTGGTATTAAGGATCCATGTCGTCCAGGAGTCAAGAAAGCTGTAAACAATTGCCAACAAGCTGGAGTGAATGTCAAAATGATCACAGGAGACAATATTTTCACAGCCAAAGCCATAGCCACAGAATGCGGCATCCTCCAGCCTAATCAAGACACATCTGAAGGAGTCATCGAAGGTGAGGTATTTCGAAACTTGTCTGTCGAGGAAAGACTAAACAAAGTGGAGAAAATTTGTGTCATGGCAAGATCCTCTCCCTTTGACAAGCTCCTAATGGTTCAATGCCTCAAACAGAAAGGTCACGTCGTTGCAGTCACAGGAGATGGCACCAATGATGCTCCAGCATTAAAGGAAGCTGATATAGGACTTTCTATGGGGATTCAAGGCACTGAAGTTGCAAAGGAAAGCTCAGACATTGTTATCTTGGATGATAATTTCACCTCAGTTGCCACAGTTCTTAAATGGGGAAGATGTGTTTATAACAACATCCAAAAGTTTATTCAATTTCAGCTTACGGTAAATGTCGCAGCTCTTGCAATTAACTTTGTGGCTGCAGTATTAGCAGGAGAAGTGCCATTAACCGCAGTCCAGCTATTGTGGGTGAACCTAATAATGGACACTTTGGGTGCTCTCGCTTTAGCAACAGAGAAGCCTACAAGGGAGTTATTGGACAAACCCCCAGTGGGTAGAAGTGAGCCTCTCATCACTAACATCATGTGGAGAAATCTCTTAGCCCAAGCTTTATACCAGATCACAATTCTATTGACGTTACAGTTCAAGGGTGAGGCCATATTTAGGGTGAGTTCAAAGGTAAATGACACTTTGATTTTCAACACATTTGTGTTATGCCAAGTGTTCAATGAGTTTAATGCAAGGAAGTTGGAGAAGAAGAATGTGTTCCAAGGGATTCACAAGAACAAGTTGTTTTTGGGGATCATAGGGATAACTATTGTGCTTCAGGTGCTGATGGTGGAGTTTTTGAAGAAATTTGCAGATACTGAGAGATTGAACTGGGGGCAATGGGGTGCATGCATTCTAATTGCGGCTATTTCTTGGCCTATTGGTTGGGTCGTCAAGTTCATTCCCGTCCCAGAGAGACCACTGCTTAGTTTCTTGAACCTGAAAAAGCAATGA 2250 0.432 MTGESDHVEINGDKNPFLFSATKVADGFGKMLVTSVGTNTTWGQMMGSISRDNNEQTPLQERLNKLTSAIGKVGLAVAFLVLLVMLVRYFTGNTTDENGNKEFKGSSTKFDDIMNGVVGIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADMAMVRKLSACETMGSATTICTDKTGTLTLNEMKVTRFWPGQQPMEEEPYQSSVHSDVQQLIKEGVAFNTTGSVYKSKTKHSDYEFSGSPTEKAILSWAVLDLGMNMVELTQSFTILHVEAFNSKKKRSGVLIKRKADNKIHAHWKGAAEMVLRLCSKYYDASGNMKELDDNKKLVFEQIIQGMAASSLRCIAFAHTEVAEEDDRGIKDVREEGLTLLGLVGIKDPCRPGVKKAVNNCQQAGVNVKMITGDNIFTAKAIATECGILQPNQDTSEGVIEGEVFRNLSVEERLNKVEKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFTSVATVLKWGRCVYNNIQKFIQFQLTVNVAALAINFVAAVLAGEVPLTAVQLLWVNLIMDTLGALALATEKPTRELLDKPPVGRSEPLITNIMWRNLLAQALYQITILLTLQFKGEAIFRVSSKVNDTLIFNTFVLCQVFNEFNARKLEKKNVFQGIHKNKLFLGIIGITIVLQVLMVEFLKKFADTERLNWGQWGACILIAAISWPIGWVVKFIPVPERPLLSFLNLKKQ 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5444g00032 749 PRINTS P-type cation-transporting ATPase superfamily signature 478 497 - -
Pral5444g00032 749 PRINTS P-type cation-transporting ATPase superfamily signature 174 188 - -
Pral5444g00032 749 PRINTS P-type cation-transporting ATPase superfamily signature 394 404 - -
Pral5444g00032 749 PRINTS P-type cation-transporting ATPase superfamily signature 372 383 - -
Pral5444g00032 749 PRINTS P-type cation-transporting ATPase superfamily signature 502 514 - -
Pral5444g00032 749 PRINTS H+-transporting ATPase (proton pump) signature 330 348 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5444g00032 749 PRINTS H+-transporting ATPase (proton pump) signature 478 494 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5444g00032 749 PRINTS H+-transporting ATPase (proton pump) signature 510 535 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5444g00032 749 SFLD p-type atpase 156 531 IPR044492 -
Pral5444g00032 749 FunFam Calcium-transporting ATPase 184 379 - -
Pral5444g00032 749 Gene3D - 495 737 - -
Pral5444g00032 749 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 180 384 IPR023299 GO:0000166
Pral5444g00032 749 Gene3D - 378 494 IPR023214 -
Pral5444g00032 749 Pfam haloacid dehalogenase-like hydrolase 171 492 - -
Pral5444g00032 749 ProSitePatterns E1-E2 ATPases phosphorylation site. 176 182 IPR018303 -
Pral5444g00032 749 NCBIfam HAD-IC family P-type ATPase 450 561 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5444g00032 749 NCBIfam HAD-IC family P-type ATPase 116 217 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5444g00032 749 NCBIfam calcium-translocating P-type ATPase, PMCA-type 1 735 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pral5444g00032 749 SUPERFAMILY Calcium ATPase, transmembrane domain M 21 735 IPR023298 -
Pral5444g00032 749 SFLD Haloacid Dehalogenase 156 531 - -
Pral5444g00032 749 Gene3D - 4 188 - -
Pral5444g00032 749 PANTHER CATION TRANSPORTING ATPASE 1 735 - -
Pral5444g00032 749 FunFam Calcium-transporting ATPase 495 737 - -
Pral5444g00032 749 FunFam Calcium-transporting ATPase 373 523 - -
Pral5444g00032 749 Pfam Cation transporting ATPase, C-terminus 563 733 IPR006068 -
Pral5444g00032 749 SUPERFAMILY HAD-like 172 583 IPR036412 -
Pral5444g00032 749 Gene3D - 189 377 IPR023299 GO:0000166
Pral5444g00032 749 SUPERFAMILY Calcium ATPase, transduction domain A 1 48 IPR008250 -
Pral5444g00032 749 Pfam E1-E2 ATPase 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5444g00032 Pral-Chr5444 327069 331819 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5444g00032 1 749 Primary Pumps ATPases AT3G22910 73.005 0.0 1052
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5444g00032 K01537 - vvi:100259585 1180.24