Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5444g00031 ATGTCGAAGGCATTTTTGCCAGATATGGAGACAATACAGACACTTCTGCATGCCCCAAAGAATCTTAGCAAACCCAACAAAAAATGGCGCTCCGCATTCGTTAGTATATATTGTTACAGAGCTCTCTTGTCTCACTTCAAATCCACTTTGCTTCCCTCCCGTACCACCATCAAGAACAAGCCTAAGCTGTCACCTTCTTCCTCCTATACTGTTATCGATTTAGACACAGATCATTCCTTCTTCAGTGTTAGCCAAACCACACTCACCAATCTCGTGAAGGAGAAAAATGAAGAGACCCTGCAAAATCTTGGTGGGGTGCATGGCGTGGTCTCCGCTCTAAAAACCGACATTGAAAATGGAGTCAAAGGCGGTGATGATGATGATGATCCCAGTGACGTCATGCGACGGCGCGACGCATTTGGATCTAACACCTATCCCAAACCACCCACGAGAGGTTTCTTTCATTTTGTGATTGAGGGCTTCAAGGACCCCACCATTCTCATTCTCTTGGTTTGCGCTGCTTTGTCTCTTGGCTTCGGCATCAAAGAGAATGGAATCAAAGAAGGCTGGTACGAAGGTGGAAGCATCTTCGTTGCTGTTTTTCTCGTCATTGCTGTATCTTCCATCAGTAACTTCAGACAGAGCAGACAATTCGACAAGCTGTCCCAGGTTAGCAATAACATCCAAGTAGATGTTGTACGAAGTGGTCGCCGGCAACAAGTTTCCATATACGACATCGTGGTGGGTGACGTCGTGTGGCTGAAGATCGGAGACCAAGTTCCTGCAGATGGCTTGCTCCTGGAAGGCCATTCTCTGCAAGTTGATGAGTCTAGCATGACAGGTGAGAGCGACCACGTAGAGATTAATGGTGACAAAAACCCATTTTTGTTTTCTGCGACTAAGGTGGCTGACGGTTTTGGCAAGATGCTCGTCACTTCCGTTGGTACGAACACAACATGGGGTCAAATGATGGGTTCCATAAGCAGAGACAACAATGAACAAACTCCTCTGCAAGAACGCCTCAATAAGCTTACTTCTGCCATTGGCAAGGTTGGCTTGGCAGTGGCTTTTCTTGTTCTTCTTGTTATGTTAGTTCGCTACTTCACAGGGAACACAACTGATGAGAATGGGAATAAGGAGTTCAAGGGAAGCAGCACCAAGTTTGATGACATAATGAATGGAGTTGTGGGAATTGTTGCTGCTGCTGTTACCATTGTCGTGGTCGCGATTCCAGAAGGGCTTCCATTGGCTGTGACATTGACCCTTGCTTATTCCATGAAGAAGATGATGGCTGATATGGCTATGGTGAGGAAGCTCTCTGCCTGCGAGACAATGGGGTCGGCCACAACCATTTGCACTGATAAGACTGGCACACTCACGCTTAATGAGATGAAAGTGACAAGATTCTGGCCTGGACAGCAACCTATGGAAGAGGAACCTTATCAATCATCAGTTCATTCGGATGTCCAACAACTAATCAAAGAAGGGGTTGCCTTTAACACCACAGGTAGTGTTTACAAGTCTAAAACAAAACATTCTGACTATGAATTTTCAGGTAGTCCAACAGAAAAAGCTATTCTTTCATGGGCTGTTCTTGATTTGGGCATGAACATGGTGGAATTAACGCAAAGTTTTACCATCCTTCATGTGGAGGCCTTCAATTCAAAGAAGAAGAGGAGTGGGGTTTTGATTAAAAGGAAGGCAGACAACAAAATCCATGCACATTGGAAAGGAGCAGCTGAAATGGTGCTTAGGTTGTGTTCAAAGTACTATGATGCTTCTGGCAATATGAAAGAACTTGATGACAACAAAAAGCTAGTCTTTGAGCAAATCATTCAAGGGATGGCGGCCAGCAGCCTTAGGTGTATTGCTTTTGCACATACAGAAGTAGCTGAAGAAGATGATAGAGGAATCAAAGATGTAAGAGAAGAAGGGCTCACCCTCTTAGGACTTGTTGGTATTAAGGATCCATGTCGTCCAGGAGTCAAGAAAGCTGTAAACAATTGCCAACAAGCTGGAGTGAATGTCAAAATGATCACAGGAGACAATATTTTCACAGCCAAAGCCATAGCCACAGAATGCGGCATCCTCCAGCCTAATCAAGACACATCTGAAGGAGTCATCGAAGGTGAGGTATTTCGAAACTTGTCTGTCGAGGAAAGACTAAACAAAGTGGAGAAAATTTGTGTCATGGCAAGATCCTCTCCCTTTGACAAGCTCCTAATGGTTCAATGCCTCAAACAGAAAGGTCACGTCGTTGCAGTCACAGGAGATGGCACCAATGATGCTCCAGCATTAAAGGAAGCTGATATAGGACTTTCTATGGGGATTCAAGGCACTGAAGTTGCAAAGGAAAGCTCAGACATTGTTATCTTGGATGATAATTTCACCTCAGTTGCCACAGTTCTTAAATGGGGAAGATGTGTTTATAACAACATCCAAAAGTTTATTCAATTTCAGCTTACGGTAAATGTCGCAGCTCTTGCAATTAACTTTGTGGCTGCAGTATTAGCAGGAGAAGTGCCATTAACCGCAGTCCAGCTATTGTGGGTGAACCTAATAATGGACACTTTGGGTGCTCTCGCTTTAGCAACAGAGAAGCCTACAAGGGAGTTATTGGACAAACCCCCAGTGGGTAGAAGTGAGCCTCTCATCACTAACATCATGTGGAGAAATCTCTTAGCCCAAGCTTTATACCAGATCACAATTCTATTGACGTTACAGTTCAAGGGTGAGGCCATATTTAGGGTGAGTTCAAAGGTAAATGACACTTTGATTTTCAACACATTTGTGTTATGCCAAGTGTTCAATGAGTTTAATGCAAGGAAGTTGGAGAAGAAGAATGTGTTCCAAGGGATTCACAAGAACAAGTTGTTTTTGGGGATCATAGGGATAACTATTGTGCTTCAGGTGCTGATGGTGGAGTTTTTGAAGAAATTTGCAGATACTGAGAGATTGAACTGGGGGCAATGGGGTGCATGCATTCTAATTGCGGCTATTTCTTGGCCTATTGGTTGGGTCGTCAAGTTCATTCCCGTCCCAGAGAGACCACTGCTTAGTTTCTTGAACCTGAAAAAGCAATGA 3084 0.442 MSKAFLPDMETIQTLLHAPKNLSKPNKKWRSAFVSIYCYRALLSHFKSTLLPSRTTIKNKPKLSPSSSYTVIDLDTDHSFFSVSQTTLTNLVKEKNEETLQNLGGVHGVVSALKTDIENGVKGGDDDDDPSDVMRRRDAFGSNTYPKPPTRGFFHFVIEGFKDPTILILLVCAALSLGFGIKENGIKEGWYEGGSIFVAVFLVIAVSSISNFRQSRQFDKLSQVSNNIQVDVVRSGRRQQVSIYDIVVGDVVWLKIGDQVPADGLLLEGHSLQVDESSMTGESDHVEINGDKNPFLFSATKVADGFGKMLVTSVGTNTTWGQMMGSISRDNNEQTPLQERLNKLTSAIGKVGLAVAFLVLLVMLVRYFTGNTTDENGNKEFKGSSTKFDDIMNGVVGIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADMAMVRKLSACETMGSATTICTDKTGTLTLNEMKVTRFWPGQQPMEEEPYQSSVHSDVQQLIKEGVAFNTTGSVYKSKTKHSDYEFSGSPTEKAILSWAVLDLGMNMVELTQSFTILHVEAFNSKKKRSGVLIKRKADNKIHAHWKGAAEMVLRLCSKYYDASGNMKELDDNKKLVFEQIIQGMAASSLRCIAFAHTEVAEEDDRGIKDVREEGLTLLGLVGIKDPCRPGVKKAVNNCQQAGVNVKMITGDNIFTAKAIATECGILQPNQDTSEGVIEGEVFRNLSVEERLNKVEKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFTSVATVLKWGRCVYNNIQKFIQFQLTVNVAALAINFVAAVLAGEVPLTAVQLLWVNLIMDTLGALALATEKPTRELLDKPPVGRSEPLITNIMWRNLLAQALYQITILLTLQFKGEAIFRVSSKVNDTLIFNTFVLCQVFNEFNARKLEKKNVFQGIHKNKLFLGIIGITIVLQVLMVEFLKKFADTERLNWGQWGACILIAAISWPIGWVVKFIPVPERPLLSFLNLKKQ 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5444g00031 1027 FunFam Calcium-transporting ATPase 773 1015 - -
Pral5444g00031 1027 SFLD C1.7: P-type atpase like 434 809 - -
Pral5444g00031 1027 SUPERFAMILY HAD-like 450 861 IPR036412 -
Pral5444g00031 1027 NCBIfam calcium-translocating P-type ATPase, PMCA-type 76 1013 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pral5444g00031 1027 Pfam E1-E2 ATPase 229 430 - -
Pral5444g00031 1027 Pfam Cation transporting ATPase, C-terminus 841 1011 IPR006068 -
Pral5444g00031 1027 PANTHER CATION TRANSPORTING ATPASE 68 1013 - -
Pral5444g00031 1027 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 458 662 IPR023299 GO:0000166
Pral5444g00031 1027 SFLD p-type atpase 434 809 IPR044492 -
Pral5444g00031 1027 Gene3D - 131 328 - -
Pral5444g00031 1027 SMART Cation_ATPase_N_a_2 102 181 IPR004014 -
Pral5444g00031 1027 FunFam Calcium-transporting ATPase 651 801 - -
Pral5444g00031 1027 SUPERFAMILY Calcium ATPase, transduction domain A 227 326 IPR008250 -
Pral5444g00031 1027 Gene3D - 462 657 IPR023299 GO:0000166
Pral5444g00031 1027 Pfam haloacid dehalogenase-like hydrolase 449 770 - -
Pral5444g00031 1027 ProSitePatterns E1-E2 ATPases phosphorylation site. 454 460 IPR018303 -
Pral5444g00031 1027 NCBIfam HAD-IC family P-type ATPase 394 495 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5444g00031 1027 NCBIfam HAD-IC family P-type ATPase 196 369 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5444g00031 1027 NCBIfam HAD-IC family P-type ATPase 728 839 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5444g00031 1027 PRINTS P-type cation-transporting ATPase superfamily signature 672 682 - -
Pral5444g00031 1027 PRINTS P-type cation-transporting ATPase superfamily signature 780 792 - -
Pral5444g00031 1027 PRINTS P-type cation-transporting ATPase superfamily signature 452 466 - -
Pral5444g00031 1027 PRINTS P-type cation-transporting ATPase superfamily signature 756 775 - -
Pral5444g00031 1027 PRINTS P-type cation-transporting ATPase superfamily signature 650 661 - -
Pral5444g00031 1027 PRINTS P-type cation-transporting ATPase superfamily signature 275 289 - -
Pral5444g00031 1027 FunFam Calcium-transporting ATPase 462 657 - -
Pral5444g00031 1027 SUPERFAMILY Calcium ATPase, transmembrane domain M 104 1013 IPR023298 -
Pral5444g00031 1027 Gene3D - 449 801 IPR023214 -
Pral5444g00031 1027 Gene3D - 159 1011 - -
Pral5444g00031 1027 FunFam Calcium-transporting ATPase 200 328 - -
Pral5444g00031 1027 CDD P-type_ATPase_Ca_PMCA-like 135 889 - -
Pral5444g00031 1027 PRINTS H+-transporting ATPase (proton pump) signature 608 626 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5444g00031 1027 PRINTS H+-transporting ATPase (proton pump) signature 788 813 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5444g00031 1027 PRINTS H+-transporting ATPase (proton pump) signature 756 772 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5444g00031 1027 Pfam Cation transporter/ATPase, N-terminus 104 176 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5444g00031 Pral-Chr5444 327069 353731 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5444g00031 12 1027 Primary Pumps ATPases AT3G22910 69.276 0.0 1335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5444g00031 K01537 - qsa:O6P43_021514 1530.38