Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5444g00029 ATGTCTATGCCCTTCGTCACCAATTTGGAGCGTATACAGACGCTATTCAATGTCCCTCACAATCTTAGCAAACCGAACAAAAAATGGCATTCTGCTTTTGTTACAATTTATTGTTCCAGAGCCCTCTTGTCTCACTTCGAATCCACAGTGCCTCTCACCAAGAGCAACAATAGGTCTAAGTTATCACCATCTTCCTCCTACACTGTTATCGATTTAGATACAGATCATTCCTTCAGTGTTAGCCAAACAACTCTCACCAGTCTCGTGAAGGAGAAAAATGAAGAGACCCTGCAAAATCTTGGTGGGGTTCACGGCGTGGTCTCTGCTCTGAAAGCCGACATAGATCATGGAGTCCCAGGTGGTGATGATGATGATCCTAATGACGTCAAGCGACGGCGCGACGCCTTTGGTTCTAACACCTATCCCAAACCACCTACGAGAGGTTTCTTTCATTTTGTGATTGAAGGCTTCAAGGACCCCACCATTCTCATTCTCTTGGTTTGTGCTGCTCTGTCTCTTGGCTTCGGCATCAAAGAGAATGGAATTAAAGAAGGCTGGTACGAAGGTGGAAGCATCTTCATTGCTGTTTATCTCGTCATTGCTGTATCTTCCATCAGTAACTTCAGACAGAGCAGACAGTTCGACAAGCTGTCCCAGGTTAGCAATAACATCCTAGTAGATGTTGTACGAAGTGGTCGCCGGCAACAAGTTTCCATATACGACATCGTGGTGGGTGATGTCGTTTGGCTGAAGATCGGAGACCAAGTTCCTGCTGATGGCTTGTTCCTGGAAGGCCATTCTCTGCAAGTTGATGAGTCTAGCATGACAGGTGAGAGCGACCACGTAGAGATTAACGGCGACAAAAACCCATTTTTGTTTTCTGGGACTAAGGTGGCTGACGGTTTTGGCAAGATGCTCGTCACTTCCGTTGGTACGAACACAACATGGGGTCAAATGATGGGTTCCATAAGCAGAGACAACAATGAAGAAACTCCTCTGCAAGAACGCCTCAATAAGCTTACTTCTGCTATTGGCAAGGTTGGCTTGGCAGTGGCTCTTCTTGTTCTTGTTGTTATGTTGGTTCGCTACTTCACAGGCAACACAACTGATGAGCATGGGAATAAGGAGTTCAAGGGAAGCAGCACTAAGTTTGATGACATAATGAATGGAGTTGTGGGAATTGTCGCCGCTGCTGTTACTATTGTCGTGGTCGCGATTCCAGAAGGGCTTCCTTTGGCTGTGACATTGACGCTTGCTTATTCCATGAATAAGATGATGGCTGATATGGCTATGGTGAGGAAGCTCTCTGCCTGTGAGACAATGGGGTCGGCCACAACCATTTGTACTGATAAGACTGGCACGCTCACGCTTAATGAGATGAAAGTGACGAAGTTCTGGCTTGGACAGCAACCTGTGGAAGAGGAACCTCATCAATCATCAGTTCATTCAGATGTCCTACAATTAATCAAAGAAGGGGTTGCCCTTAACACCACAGGTAGTGTTTACAAGTCTAAAACAAAAAATTCTGAATATGAATTTTCAGGTAGTCCAACGGAAAAGGCCATTCTTTCATGGGCTGTTCTTGATTTGGGCATGAACATGGACGAATTGACACAAAGTTCTACCATCCTTCATGTGGAAGCCTTCAATTCAAAAAAGAAAAGAAGTGGGGTTTCGATTAAAAGGAAAGGAAACAACAAAATCCATGTGCATTGGAAAGGAGCAGCAGAGATGGTGCTGAGGCTGTGTTCAAAGTACTACGATGATGCTTCTGGCAATATAAAGGATCTTGATGACGACAAAAAGTTGGCGTTTGAGCACATCATTCAAGGAATGGCAGCTAGCAGTCTTAGGTGTATTGCTTTTGCACATACAGAAGTAGCTAAAGAAGATGATGCAGGAAGCAAAAAGGTAAGAAAAGAAGGGCTCACCCTCTTAGGACTTGTTGGTATTAAGGATCCATGTCGTCTAGGTGTCAAGAAGGCCGTAAACGATTGCCAACAAGCTGGAGTCAGTGTCAAAATGATCACAGGAGACAATGTTTTCACAGCCAAAGCCATAGCCACAGAATGTGGCATCCTCCAGCCTAATCAAGACACATCAGAAGCAGTCATCGAAGGTGAGGTGTTTCGAAACTTGTCCATTGAGGAAAGACTCAATAGAGTGGAGAAAATTTGTGTGATGGCGAGATCCTCTCCCTTTGACAAGCTCCTTATGGTTCAATGCCTCAAACAGAAAGGCCATGTGGTAGCAGTCACAGGAGATGGCACCAATGATGCTCCGGCATTAAAGGAAGCTGATATAGGACTTTCCATGGGGATTCAAGGCACTGAAGTTGCAAAGGAAAGCTCTGACATTGTTATCTTGGATGATAATTTCGCCTCAATTGCCACAGTTCTTAAATGGGGAAGATGTGTTTATAACAACATCCAAAAGTTCATTCAATTTCAGCTTACAGTAAATGTTGCAGCTCTTGCAATTAACTTTGTGGCTACAGTATCAGCAGGAGAAGTGCCATTAACTGCAGTCCAGCTATTGTGGGTGAACCTAATAATGGATACGTTGGGTGCTCTCGCTTTAGCAACAGAGAAGCCTACAAGGGATTTATTGGACAAACCCCCAGTGGGTAGAACTGAGCCTCTCATCACCAACATCATGTGGAGAAATCTCTTAGCCCAAGCTTTATACCAGCTCACAATTCTATTGACCTTACAGTTCAAGGGTGAGGCCATATTTGGGGTGAGTTCAAGGGTAAATGACACTTTGATTTTCAACTCATTTGTGTTATGCCAAGTGTTCAATGAGTTTAATGCAAGGAAGTTGGAGAAGAAGAATGTGTTCCAAGGGATTCACAAGAACAGATTGTTTCTGGGAATCATAGGGATAACCATTGTGCTTCAGGTGTTGATGGTGGAGTTTCTAAAGAAATTTGCAGATACTAAGAGATTGGATTGGGGGCAATGGGGTGCATGCATTCTAATTGCAGCTATTTCTTGGCCTATTGGTTGGGTTGTCAAGTTCATTCCCGTTCCAAAGAGACCACTGCTTAGTTTCCTGAACATGAAGAAGCAATGA 3075 0.442 MSMPFVTNLERIQTLFNVPHNLSKPNKKWHSAFVTIYCSRALLSHFESTVPLTKSNNRSKLSPSSSYTVIDLDTDHSFSVSQTTLTSLVKEKNEETLQNLGGVHGVVSALKADIDHGVPGGDDDDPNDVKRRRDAFGSNTYPKPPTRGFFHFVIEGFKDPTILILLVCAALSLGFGIKENGIKEGWYEGGSIFIAVYLVIAVSSISNFRQSRQFDKLSQVSNNILVDVVRSGRRQQVSIYDIVVGDVVWLKIGDQVPADGLFLEGHSLQVDESSMTGESDHVEINGDKNPFLFSGTKVADGFGKMLVTSVGTNTTWGQMMGSISRDNNEETPLQERLNKLTSAIGKVGLAVALLVLVVMLVRYFTGNTTDEHGNKEFKGSSTKFDDIMNGVVGIVAAAVTIVVVAIPEGLPLAVTLTLAYSMNKMMADMAMVRKLSACETMGSATTICTDKTGTLTLNEMKVTKFWLGQQPVEEEPHQSSVHSDVLQLIKEGVALNTTGSVYKSKTKNSEYEFSGSPTEKAILSWAVLDLGMNMDELTQSSTILHVEAFNSKKKRSGVSIKRKGNNKIHVHWKGAAEMVLRLCSKYYDDASGNIKDLDDDKKLAFEHIIQGMAASSLRCIAFAHTEVAKEDDAGSKKVRKEGLTLLGLVGIKDPCRLGVKKAVNDCQQAGVSVKMITGDNVFTAKAIATECGILQPNQDTSEAVIEGEVFRNLSIEERLNRVEKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASIATVLKWGRCVYNNIQKFIQFQLTVNVAALAINFVATVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTRDLLDKPPVGRTEPLITNIMWRNLLAQALYQLTILLTLQFKGEAIFGVSSRVNDTLIFNSFVLCQVFNEFNARKLEKKNVFQGIHKNRLFLGIIGITIVLQVLMVEFLKKFADTKRLDWGQWGACILIAAISWPIGWVVKFIPVPKRPLLSFLNMKKQ 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5444g00029 1024 FunFam Calcium-transporting ATPase 649 798 - -
Pral5444g00029 1024 PANTHER CATION TRANSPORTING ATPASE 66 1010 - -
Pral5444g00029 1024 Gene3D - 155 1008 - -
Pral5444g00029 1024 NCBIfam calcium-translocating P-type ATPase, PMCA-type 76 1010 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pral5444g00029 1024 Gene3D - 445 798 IPR023214 -
Pral5444g00029 1024 FunFam Calcium-transporting ATPase 458 654 - -
Pral5444g00029 1024 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 454 659 IPR023299 GO:0000166
Pral5444g00029 1024 MobiDBLite consensus disorder prediction 115 140 - -
Pral5444g00029 1024 SUPERFAMILY HAD-like 446 858 IPR036412 -
Pral5444g00029 1024 CDD P-type_ATPase_Ca_PMCA-like 129 886 - -
Pral5444g00029 1024 Pfam haloacid dehalogenase-like hydrolase 445 767 - -
Pral5444g00029 1024 MobiDBLite consensus disorder prediction 116 137 - -
Pral5444g00029 1024 FunFam Calcium-transporting ATPase 195 324 - -
Pral5444g00029 1024 FunFam Calcium-transporting ATPase 770 1012 - -
Pral5444g00029 1024 Pfam Cation transporter/ATPase, N-terminus 102 172 IPR004014 -
Pral5444g00029 1024 SFLD p-type atpase 430 806 IPR044492 -
Pral5444g00029 1024 NCBIfam HAD-IC family P-type ATPase 192 365 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5444g00029 1024 NCBIfam HAD-IC family P-type ATPase 726 833 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5444g00029 1024 NCBIfam HAD-IC family P-type ATPase 390 486 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5444g00029 1024 Pfam E1-E2 ATPase 226 426 - -
Pral5444g00029 1024 PRINTS P-type cation-transporting ATPase superfamily signature 777 789 - -
Pral5444g00029 1024 PRINTS P-type cation-transporting ATPase superfamily signature 271 285 - -
Pral5444g00029 1024 PRINTS P-type cation-transporting ATPase superfamily signature 669 679 - -
Pral5444g00029 1024 PRINTS P-type cation-transporting ATPase superfamily signature 753 772 - -
Pral5444g00029 1024 PRINTS P-type cation-transporting ATPase superfamily signature 448 462 - -
Pral5444g00029 1024 PRINTS P-type cation-transporting ATPase superfamily signature 647 658 - -
Pral5444g00029 1024 Pfam Cation transporting ATPase, C-terminus 838 1008 IPR006068 -
Pral5444g00029 1024 PRINTS H+-transporting ATPase (proton pump) signature 785 810 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5444g00029 1024 PRINTS H+-transporting ATPase (proton pump) signature 753 769 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5444g00029 1024 PRINTS H+-transporting ATPase (proton pump) signature 605 623 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5444g00029 1024 SUPERFAMILY Calcium ATPase, transduction domain A 224 322 IPR008250 -
Pral5444g00029 1024 Gene3D - 127 324 - -
Pral5444g00029 1024 SUPERFAMILY Calcium ATPase, transmembrane domain M 101 1011 IPR023298 -
Pral5444g00029 1024 ProSitePatterns E1-E2 ATPases phosphorylation site. 450 456 IPR018303 -
Pral5444g00029 1024 Gene3D - 458 654 IPR023299 GO:0000166
Pral5444g00029 1024 SFLD Haloacid Dehalogenase 430 806 - -
Pral5444g00029 1024 SMART Cation_ATPase_N_a_2 99 177 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5444g00029 Pral-Chr5444 270904 274153 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5444g00029 12 1024 Primary Pumps ATPases AT3G22910 68.235 0.0 1330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5444g00029 K01537 - qsa:O6P43_021514 1514.21