Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5444g00025 ATGATGAAGATGGGTAGGAATCATATAATTCTTCGCCGTCGTGTTGAGTCTTGCAAATCCAGGTATTCAACTCTCGATGAAATCGTGAGCCATCTTCGCTCAAATTACCCCGATTATCGGCGAACAAAGCAGCAAATTTTGACTCGATCTGTTCAAGAAGCTTTGGAGTCATTTAAGCATGGGAGCAAGCAATTGAACAAAAAGCCTAGTGCTTCCGTATTTAAGTTTGACACCTCAGAAGATGACAAGGACGATGAAGAAGAGGGTTGGAGTGCATCTCGAAAGAGGCGCAAGAAAATTGATGAGAGTGAAGAGAATTTGCAAAAAATGGAGAATTTACACCTTAAAAAGTTGCAGAGGGATCAGGGTCATACATCGACCTCTTCTGCTTCAACTTCTAGTCCATCATTGTCATCAGAATCTAAAGAGAGTGATGGTGAGAAAGTGGAGCCAGCTGTTGACTTGATGAAGACAATGTTGCGGGCTTCATATTCAGAATCAAAGAAAGTAAAATCTAAAATGGAAGAGAAAAATGTAGAATTCGAGGTGGCCAATAATAGTAAAGCAACTAAAATTGATGCTATGGATGGGACTGGAGGTGGGATGAGATCGGATTTGGAATCCAAAAGGCAATTGAAGGATTCGTTTTCAAATGGCAGTGGTGATCTTGAGGTTAAGGGGAAGGGTGGACCTAGATTCAAAGATTTGGGTGGGATGAAGAAGGTACTGGAGGAGTTGAAAATGGAAGTTATTGTGCCACTTTATCATCCACAGTTGCCAAGAAGGTTAGGTGTGAGGCCAATAGCTGGGATTTTGTTGCATGGACCACCAGGATGTGGGAAGACTACACTGGCTCATGCTATAGCTAATGAGACTGGTTTTCCGTTCTATCAGATATCGGCTACAGAGTTAGTTTCTGGAGTTTCAGGAGCATCAGAAGAAAATATTAGAGAGCTTTTCTCTAAAGCATATAGGACCGCCCCATCAATTGTCTTTATTGATGAGATTGATGCAATTGCTTCAAAAAGAGAGAATTTACAGCGTGAGATGGAGAAACGAATTGTGACCCAATTAATGACTTCGATGGATCAATCAAACAGGCTTCTTCAACCAGCTGATAGTTCAGAAAGTTCTGATGCCCATCCTGGCTATATTCTTGTTATTGGAGCTACAAATAGGCCTGATGCTGTTGACCCTGCCCTAAGAAGGCCTGGGCGGTTTGATCGTGAAATTGTCCTTGGTGTTCCTGATGAACATGGGAGGGAGGAGATCTTGTTTGTGCTTACTCGCAATCTAAAACTAGAGGGCTCCTTTGATCTTAGGAAAATAGCCAGGTCTACACCAGGTTTTGTTGGAGCAGATTTAGCAGCTCTGGTTAACAAGGCAGGTAACCTGGCAATGAGAAGAATTATTGTTGAAAGGAAATGTGAGTTATCCCAAGATCCTTTAGATGAGCGTTCTGAAGAATGGTGGAGGGAACCTTGGTCACCTGAAGAGATGGATAAGCTTCTGATCGAAATGTCTGATTTTGAGGAAGCAGTTAAGTTGGTGCAACCTTCATCAAGAAGAGAAGGATTTTCTTCCATTCCTAATGTAAAATGGGAAGATATTGGTGGGCTTGATCTTCTAAGACGAGAGTTTGAGCGTTATATAGTTAGACGCATAAAATATCCAGAGGATTATGAGGAATTTGGGGTGAATCTTGAGACCGGATTTTTGCTTTATGGACCACCTGGGTGTGGTAAAACGCTGATAGCCAAAGCTGTTGCCCATGAAGCAGGAGCTAATTTTATTCATATCAAGGGCCCTGAACTCTTAAATAAATACGTTGGAGAAAGTGAGCTGGCAGTACGGACATTATTTAGTCGTGCAAGAACATGTTCGCCTTGCATTCTTTTCTTTGATGAGGTGGATGCTTTGACGACTAAACGGGGTAAAGAAGGTGGATGGGTTGTTGAACGGCTATTAAACCAGTTGCTTATTGAATTAGACGGTGCAGAGCAAAGGCAAGGTGTTTTTGTTATTGGTGCTACAAATAGACCTGAGGTGATGGACCGTGCTCTCCTTCGGCCCGGTCGGCTTGGCAAACTTCTCTATGTTCCTCTTCCAAGCCCTGATGAGCGAGGTCTGATCTTAAAAGCTCTTGCAAGGAAGAAGCCAATTGATGAAACTGTGGATTTGTGTGCCATTGGAAGAATGGAAGCTTGTGAAAACCTCAGCGGTGCTGATCTTGCTGCAGTGATGAACGAAGCAGCAGTGGCTGCAGCTGAAGAGAAATGGACAACAGAGAGCACTTGCAACGCATCGACCATCAAGTTCAGCCATTTTGAGATGGCATTGAGAAAAATCTCTCCATCAGTGTCAGACATGCAGCAAAAGCTATACTATCAACGATTGTCAGAGAGTTTTAAAGCTGCATGA 2421 0.4287 MMKMGRNHIILRRRVESCKSRYSTLDEIVSHLRSNYPDYRRTKQQILTRSVQEALESFKHGSKQLNKKPSASVFKFDTSEDDKDDEEEGWSASRKRRKKIDESEENLQKMENLHLKKLQRDQGHTSTSSASTSSPSLSSESKESDGEKVEPAVDLMKTMLRASYSESKKVKSKMEEKNVEFEVANNSKATKIDAMDGTGGGMRSDLESKRQLKDSFSNGSGDLEVKGKGGPRFKDLGGMKKVLEELKMEVIVPLYHPQLPRRLGVRPIAGILLHGPPGCGKTTLAHAIANETGFPFYQISATELVSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIASKRENLQREMEKRIVTQLMTSMDQSNRLLQPADSSESSDAHPGYILVIGATNRPDAVDPALRRPGRFDREIVLGVPDEHGREEILFVLTRNLKLEGSFDLRKIARSTPGFVGADLAALVNKAGNLAMRRIIVERKCELSQDPLDERSEEWWREPWSPEEMDKLLIEMSDFEEAVKLVQPSSRREGFSSIPNVKWEDIGGLDLLRREFERYIVRRIKYPEDYEEFGVNLETGFLLYGPPGCGKTLIAKAVAHEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGAEQRQGVFVIGATNRPEVMDRALLRPGRLGKLLYVPLPSPDERGLILKALARKKPIDETVDLCAIGRMEACENLSGADLAAVMNEAAVAAAEEKWTTESTCNASTIKFSHFEMALRKISPSVSDMQQKLYYQRLSESFKAA 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5444g00025 806 Gene3D - 530 795 IPR027417 -
Pral5444g00025 806 Gene3D - 225 414 IPR027417 -
Pral5444g00025 806 MobiDBLite consensus disorder prediction 88 106 - -
Pral5444g00025 806 Pfam AAA+ lid domain 438 477 IPR041569 -
Pral5444g00025 806 Pfam Nucleolin binding domain 11 60 IPR031996 -
Pral5444g00025 806 MobiDBLite consensus disorder prediction 62 106 - -
Pral5444g00025 806 FunFam Cell division control protein 48 homolog C 416 524 - -
Pral5444g00025 806 FunFam ATPase, AAA family protein 530 708 - -
Pral5444g00025 806 Pfam ATPase family associated with various cellular activities (AAA) 271 413 IPR003959 GO:0005524|GO:0016887
Pral5444g00025 806 Pfam ATPase family associated with various cellular activities (AAA) 573 701 IPR003959 GO:0005524|GO:0016887
Pral5444g00025 806 ProSitePatterns AAA-protein family signature. 385 403 IPR003960 GO:0005524|GO:0016887
Pral5444g00025 806 PANTHER AAA-FAMILY ATPASE 107 804 - -
Pral5444g00025 806 ProSitePatterns AAA-protein family signature. 672 690 IPR003960 GO:0005524|GO:0016887
Pral5444g00025 806 FunFam Ribosome biogenesis ATPase RIX7 222 414 - -
Pral5444g00025 806 MobiDBLite consensus disorder prediction 118 150 - -
Pral5444g00025 806 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 530 786 IPR027417 -
Pral5444g00025 806 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 232 522 IPR027417 -
Pral5444g00025 806 SMART AAA_5 568 704 IPR003593 GO:0016887
Pral5444g00025 806 SMART AAA_5 267 417 IPR003593 GO:0016887
Pral5444g00025 806 Coils Coil 93 120 - -
Pral5444g00025 806 Gene3D - 416 524 - -
Pral5444g00025 806 Gene3D - 703 781 - -
Pral5444g00025 806 MobiDBLite consensus disorder prediction 122 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5444g00025 Pral-Chr5444 234117 240605 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5444g00025 230 804 Calmodulin-binding Proteins AT3G56690 36.190 7.91e-117 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5444g00025 K14571 - gmx:100809594 1068.91