Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5444g00020 ATGAAGCTTCTTCAGTCCGATGAGACCGCCTCTGAGGCTTGCGACCTTCCTGAGGAAACCCAAGAAGAGAAACCCTCCAGTTCGTCTGTGGTTGAAGGCATTGACCGTGGCCTTGATAATGGTGATGCGGTTCTCGATGTGTTCGGGAAAACCGTGGAGTTCCCGGTATTGGAGAACGCAGAAGACTCCGTGGAGGGCTTGTATTTTTATAAGAATGTCTACAATTTGATCCCCAAGTCTTTGGGAGGTCTTGCGCGGTTGAAGACATTGAAGTTCTTCGGAAATGAGATTAATTTGTTTGCCCCAGAGTTTGGAAACCTGACGGGCTTGGAGTGTTTGCAGATGAAGATATCTTCTCCTGGAATTGGTGGGTTGCCATTGCATAAGTTGAAGGGTTTGAAGGAGTTAGAGTTGTCCAAAGTGCCTCCGCGGCCTTCTGCTTTCCCTATATTGACAGAGATTGCTGGTCTTAAGTCCTTGTCCAAGCTATCTATTTGCCACTTTTCTATAAGATACCTCCCTCCTGAAATTGGCCTCTTAAAGAAACTGGAGTATCTTGATCTTTCATTCAATAAGATGAAGACACTGCCCTCCGAAATCAGTTATTTGAATGGCTTGATATCTTTGAAAGTTTCCAATAATAAGTTGGTGGAACTACCATCAACTATGGCATCTTTGTCCGGGCTGGAGAACTTGGACCTGTCAAGTAATAGGTTGACTTCACTGGGACCTCTTGAACTTGGGTCTATGCATAAACTTCAGAATTTAAATCTTCAGTTCAATAAGCTGCGCAGCATGCTTCAAATACCTTCATGGATTCATTGTAATATGGAAGGAAACGACAGAGGTGAATGCAGCGATGATTTTAGCAGTTCTTCTGTTGAAATGGATGTCTATGAAACGAGTTCACTGGAGAATGATGGACTACTTTCACATGCATCTCGTAATAGCTCATCAAGCCTATTAACTAGCTCCTCGTCTAGTAGATGTTTTGCAACACGGAAATCAGGTAAAAAGTGGAAGCGGCGGCACTACTTACAGCAGAAAGCCCGCCAAGAGTGCTTAAACAACAGCAGGAAGTGGAAAGGTTTAAATAATTCACAACTGGGCAAGGACATGCATAGAATTTGTGAATCAGAAAACCAAGGCAGCCCTGCTGTTGAAAACTGCAGTGAAGCTCATCCATCAGATAGTGTGTGTCTGGACAATGAAGCTAAAAAGATGGTCTCAGAAGAAGCTGGGAATGACAGTGTAATTGATGATGTTAACAACAATGAAGTGGGTATTGAAAAGCAATTTAAGGATTGTTCCAGTAGAAGCGAAGATGAAAACAATGCTTCCTTATGCCCGTTGGAGAATGGACCTAGTGGGCAGGACAATGCATCAAGTTCAGAATCTTTGAAGCATATTTCTAAATCAAAGAGACATTCAGAAAGGGATCTTGATAATCCTAAACCATGCAAGTCTAGAAAACCAATTGGTGATAGCTCATCATTGTCCTACAAGTACAGTAGATTATCATTTTGTGGTGCCGAAGACCATCTGCCAGATGGTTTTTATGATGCTGGACGTGATCGACCTTTTATGCCCCTTGAGAGTTATGAGCAAAATCAGTGCCTTGCCTCTCGTGAAGTCATCTTAGTGGACAGAGAAAGAGATGAAGATCTGGATGCCATAACACTCTCTGCTCAGTCATTGGTGCGTCATTTGAAGCAGTGGAATGATTTTACCAAACATGGGAATCAAGTTGCTCTTGATAGCTTCCAGATTGCTTCGCTGCTTGCCCTCTTTGTATCAGATCATTTTGGGGGCAGTGATAGAAGTGCTATTGTAGAAAGGACACGAAAAGCAGTGTCTGGTTCAAACTATCACAAGCCTTTTGTCTGTACATGCTCAACTGGAAGCAACAATGGTATTAGTGCTTCCTCCAAACCAGTTGTAAACAGTGAAGACATTACTCTTGCTAGTAACTCTGAAAAATCTCTTGAGTCTTTAAAAAGGAGACGAAATTCAATCATAGTTCCCATTGGATCTGTGCAGTTTGGTGTGTGTAGACATAGAGCTCTGCTTTTGAAGTATTTATGTGATCGCATGGAGCCTCCAGTACCCTGTGAGCTTGTCAGGGGTTTCTTAGATTTTTCACCACATGCCTGGAACACCATCGTAGTTAACAGAGGTGATACCCAGGTTAGAATGATAGTTGATGCATGCCGGCCGCATGATATAAGAGAAGAGGCAGACCCTGAGTTCTTTTGCAGGTATATACCTCTTAGTCGAACCAAAGTTCCTATTTCATCTGACGGAACTCCTGGTCCTGGTTGTTCATTTCCATCTCTCTCTACATGTGACGAATTTGAGAAGGCATCTTCAAGTACGTTAGTTCGGTGCAAATTTGGGTCAATTGAGGCTGCAGCAAAGGTGCGTACTTTGGAAGTGAAGGAGAGTTCACCAGACAAAATAAAAAACTTTGAATATAATTGTTTGGGAGAAGTGAGAATTTTAGGTGCTTTGAAACACCCTTGTATAGTTGAAATGTATGGACACCAAATATCTTACAAGTGGACTCTTCTAGAAGATGGTAATCCTGAGCATTGTGTTTTAAGGTCTGCAATTTTTATGGAGTACATAGAAGGGGGCTCTTTGAAGACCTATCTTGATGAGTTATCAAAAGCTGGTGAAAAGCATGTTCCGGTAGAGCTGGCTCTGTATATCGCCAAAGATGTTGCATGTGCATTGTCAGAGCTACACTCAAAGCACATAATTCATCGTGATGTAAAAAGTGAAAACATTCTAATTGCTTTGGATAGAAAGAAAGATGATGGCACCCCTACTGTGAAGCTTTGTGATTTTGACAGCGCAGTGCCACTAAGATCACCTTTGCATAGCTGCTGTATCGCTCATGTGGGAGCGCCTCCTCCTTATGTGTGCACTGGAACGCCACGATGGATGGCTCCAGAGGTTATGCGGACTATGTACAAAGAAAATACTTATGGATTGGAAGTTGATATCTGGTCATTTGGATGCTTACTTCTGGAGCTTCTCACGCTGCGTGTTCCATTTTCTGGGCTGTCTGATTTACAATTCCATGACATTCTACAGATGGGTAAACCACCACAATTAACAGAAGAACTGGAGGCCCTGAGTTCACTGAATGAACCCACGATGATTCGATCCGGTGATGAGCCAGACAAATCAGATACTGAGGCAGACTTGATGAAATTCCTTGTTGATTTGTTTCATAGGTGTGTGGAAGAAAATCCGGCCAAACGACCTACAGTAAAAGAAATCTATGAAATGCTGCTTGAACAAACATGCCGTCTAAAAGTACAAGATGTTGACAATAGTTAG 3348 0.425 MKLLQSDETASEACDLPEETQEEKPSSSSVVEGIDRGLDNGDAVLDVFGKTVEFPVLENAEDSVEGLYFYKNVYNLIPKSLGGLARLKTLKFFGNEINLFAPEFGNLTGLECLQMKISSPGIGGLPLHKLKGLKELELSKVPPRPSAFPILTEIAGLKSLSKLSICHFSIRYLPPEIGLLKKLEYLDLSFNKMKTLPSEISYLNGLISLKVSNNKLVELPSTMASLSGLENLDLSSNRLTSLGPLELGSMHKLQNLNLQFNKLRSMLQIPSWIHCNMEGNDRGECSDDFSSSSVEMDVYETSSLENDGLLSHASRNSSSSLLTSSSSSRCFATRKSGKKWKRRHYLQQKARQECLNNSRKWKGLNNSQLGKDMHRICESENQGSPAVENCSEAHPSDSVCLDNEAKKMVSEEAGNDSVIDDVNNNEVGIEKQFKDCSSRSEDENNASLCPLENGPSGQDNASSSESLKHISKSKRHSERDLDNPKPCKSRKPIGDSSSLSYKYSRLSFCGAEDHLPDGFYDAGRDRPFMPLESYEQNQCLASREVILVDRERDEDLDAITLSAQSLVRHLKQWNDFTKHGNQVALDSFQIASLLALFVSDHFGGSDRSAIVERTRKAVSGSNYHKPFVCTCSTGSNNGISASSKPVVNSEDITLASNSEKSLESLKRRRNSIIVPIGSVQFGVCRHRALLLKYLCDRMEPPVPCELVRGFLDFSPHAWNTIVVNRGDTQVRMIVDACRPHDIREEADPEFFCRYIPLSRTKVPISSDGTPGPGCSFPSLSTCDEFEKASSSTLVRCKFGSIEAAAKVRTLEVKESSPDKIKNFEYNCLGEVRILGALKHPCIVEMYGHQISYKWTLLEDGNPEHCVLRSAIFMEYIEGGSLKTYLDELSKAGEKHVPVELALYIAKDVACALSELHSKHIIHRDVKSENILIALDRKKDDGTPTVKLCDFDSAVPLRSPLHSCCIAHVGAPPPYVCTGTPRWMAPEVMRTMYKENTYGLEVDIWSFGCLLLELLTLRVPFSGLSDLQFHDILQMGKPPQLTEELEALSSLNEPTMIRSGDEPDKSDTEADLMKFLVDLFHRCVEENPAKRPTVKEIYEMLLEQTCRLKVQDVDNS 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5444g00020 1115 FunFam Leucine-rich repeat protein kinase family protein 53 296 - -
Pral5444g00020 1115 Pfam Ethylene-responsive protein kinase Le-CTR1 653 735 - -
Pral5444g00020 1115 ProSiteProfiles Protein kinase domain profile. 787 1100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5444g00020 1115 MobiDBLite consensus disorder prediction 442 467 - -
Pral5444g00020 1115 SUPERFAMILY RNI-like 67 281 - -
Pral5444g00020 1115 Pfam Protein kinase domain 811 1098 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5444g00020 1115 SMART LRR_sd22_2 226 247 - -
Pral5444g00020 1115 SMART LRR_sd22_2 180 205 - -
Pral5444g00020 1115 SMART LRR_sd22_2 250 271 - -
Pral5444g00020 1115 Pfam Leucine rich repeat 206 263 IPR001611 GO:0005515
Pral5444g00020 1115 ProSitePatterns Serine/Threonine protein kinases active-site signature. 920 932 IPR008271 GO:0004672|GO:0006468
Pral5444g00020 1115 ProSiteProfiles Leucine-rich repeat profile. 182 203 IPR001611 GO:0005515
Pral5444g00020 1115 Gene3D Transferase(Phosphotransferase) domain 1 782 1114 - -
Pral5444g00020 1115 MobiDBLite consensus disorder prediction 468 489 - -
Pral5444g00020 1115 ProSiteProfiles Leucine-rich repeat profile. 228 249 IPR001611 GO:0005515
Pral5444g00020 1115 SMART serkin_6 779 1100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5444g00020 1115 Gene3D Ribonuclease Inhibitor 48 287 IPR032675 -
Pral5444g00020 1115 SMART LRR_bac_2 226 245 - -
Pral5444g00020 1115 SMART LRR_bac_2 180 199 - -
Pral5444g00020 1115 SMART LRR_bac_2 203 222 - -
Pral5444g00020 1115 SMART LRR_typ_2 226 249 IPR003591 -
Pral5444g00020 1115 SMART LRR_typ_2 250 272 IPR003591 -
Pral5444g00020 1115 SMART LRR_typ_2 180 203 IPR003591 -
Pral5444g00020 1115 SMART LRR_typ_2 84 106 IPR003591 -
Pral5444g00020 1115 SUPERFAMILY Protein kinase-like (PK-like) 792 1101 IPR011009 -
Pral5444g00020 1115 MobiDBLite consensus disorder prediction 1 32 - -
Pral5444g00020 1115 FunFam Leucine-rich repeat protein kinase family protein 825 1106 - -
Pral5444g00020 1115 MobiDBLite consensus disorder prediction 434 497 - -
Pral5444g00020 1115 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 110 1105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5444g00020 Pral-Chr5444 175256 183176 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5444g00020 785 1100 MAP Kinase Kinase Kinase AT2G24360 29.022 9.52e-27 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Pral5444g00020 Pkinase 1.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5444g00020 - - gmx:100811118 1546.56