Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral5444g00020 | ATGAAGCTTCTTCAGTCCGATGAGACCGCCTCTGAGGCTTGCGACCTTCCTGAGGAAACCCAAGAAGAGAAACCCTCCAGTTCGTCTGTGGTTGAAGGCATTGACCGTGGCCTTGATAATGGTGATGCGGTTCTCGATGTGTTCGGGAAAACCGTGGAGTTCCCGGTATTGGAGAACGCAGAAGACTCCGTGGAGGGCTTGTATTTTTATAAGAATGTCTACAATTTGATCCCCAAGTCTTTGGGAGGTCTTGCGCGGTTGAAGACATTGAAGTTCTTCGGAAATGAGATTAATTTGTTTGCCCCAGAGTTTGGAAACCTGACGGGCTTGGAGTGTTTGCAGATGAAGATATCTTCTCCTGGAATTGGTGGGTTGCCATTGCATAAGTTGAAGGGTTTGAAGGAGTTAGAGTTGTCCAAAGTGCCTCCGCGGCCTTCTGCTTTCCCTATATTGACAGAGATTGCTGGTCTTAAGTCCTTGTCCAAGCTATCTATTTGCCACTTTTCTATAAGATACCTCCCTCCTGAAATTGGCCTCTTAAAGAAACTGGAGTATCTTGATCTTTCATTCAATAAGATGAAGACACTGCCCTCCGAAATCAGTTATTTGAATGGCTTGATATCTTTGAAAGTTTCCAATAATAAGTTGGTGGAACTACCATCAACTATGGCATCTTTGTCCGGGCTGGAGAACTTGGACCTGTCAAGTAATAGGTTGACTTCACTGGGACCTCTTGAACTTGGGTCTATGCATAAACTTCAGAATTTAAATCTTCAGTTCAATAAGCTGCGCAGCATGCTTCAAATACCTTCATGGATTCATTGTAATATGGAAGGAAACGACAGAGGTGAATGCAGCGATGATTTTAGCAGTTCTTCTGTTGAAATGGATGTCTATGAAACGAGTTCACTGGAGAATGATGGACTACTTTCACATGCATCTCGTAATAGCTCATCAAGCCTATTAACTAGCTCCTCGTCTAGTAGATGTTTTGCAACACGGAAATCAGGTAAAAAGTGGAAGCGGCGGCACTACTTACAGCAGAAAGCCCGCCAAGAGTGCTTAAACAACAGCAGGAAGTGGAAAGGTTTAAATAATTCACAACTGGGCAAGGACATGCATAGAATTTGTGAATCAGAAAACCAAGGCAGCCCTGCTGTTGAAAACTGCAGTGAAGCTCATCCATCAGATAGTGTGTGTCTGGACAATGAAGCTAAAAAGATGGTCTCAGAAGAAGCTGGGAATGACAGTGTAATTGATGATGTTAACAACAATGAAGTGGGTATTGAAAAGCAATTTAAGGATTGTTCCAGTAGAAGCGAAGATGAAAACAATGCTTCCTTATGCCCGTTGGAGAATGGACCTAGTGGGCAGGACAATGCATCAAGTTCAGAATCTTTGAAGCATATTTCTAAATCAAAGAGACATTCAGAAAGGGATCTTGATAATCCTAAACCATGCAAGTCTAGAAAACCAATTGGTGATAGCTCATCATTGTCCTACAAGTACAGTAGATTATCATTTTGTGGTGCCGAAGACCATCTGCCAGATGGTTTTTATGATGCTGGACGTGATCGACCTTTTATGCCCCTTGAGAGTTATGAGCAAAATCAGTGCCTTGCCTCTCGTGAAGTCATCTTAGTGGACAGAGAAAGAGATGAAGATCTGGATGCCATAACACTCTCTGCTCAGTCATTGGTGCGTCATTTGAAGCAGTGGAATGATTTTACCAAACATGGGAATCAAGTTGCTCTTGATAGCTTCCAGATTGCTTCGCTGCTTGCCCTCTTTGTATCAGATCATTTTGGGGGCAGTGATAGAAGTGCTATTGTAGAAAGGACACGAAAAGCAGTGTCTGGTTCAAACTATCACAAGCCTTTTGTCTGTACATGCTCAACTGGAAGCAACAATGGTATTAGTGCTTCCTCCAAACCAGTTGTAAACAGTGAAGACATTACTCTTGCTAGTAACTCTGAAAAATCTCTTGAGTCTTTAAAAAGGAGACGAAATTCAATCATAGTTCCCATTGGATCTGTGCAGTTTGGTGTGTGTAGACATAGAGCTCTGCTTTTGAAGTATTTATGTGATCGCATGGAGCCTCCAGTACCCTGTGAGCTTGTCAGGGGTTTCTTAGATTTTTCACCACATGCCTGGAACACCATCGTAGTTAACAGAGGTGATACCCAGGTTAGAATGATAGTTGATGCATGCCGGCCGCATGATATAAGAGAAGAGGCAGACCCTGAGTTCTTTTGCAGGTATATACCTCTTAGTCGAACCAAAGTTCCTATTTCATCTGACGGAACTCCTGGTCCTGGTTGTTCATTTCCATCTCTCTCTACATGTGACGAATTTGAGAAGGCATCTTCAAGTACGTTAGTTCGGTGCAAATTTGGGTCAATTGAGGCTGCAGCAAAGGTGCGTACTTTGGAAGTGAAGGAGAGTTCACCAGACAAAATAAAAAACTTTGAATATAATTGTTTGGGAGAAGTGAGAATTTTAGGTGCTTTGAAACACCCTTGTATAGTTGAAATGTATGGACACCAAATATCTTACAAGTGGACTCTTCTAGAAGATGGTAATCCTGAGCATTGTGTTTTAAGGTCTGCAATTTTTATGGAGTACATAGAAGGGGGCTCTTTGAAGACCTATCTTGATGAGTTATCAAAAGCTGGTGAAAAGCATGTTCCGGTAGAGCTGGCTCTGTATATCGCCAAAGATGTTGCATGTGCATTGTCAGAGCTACACTCAAAGCACATAATTCATCGTGATGTAAAAAGTGAAAACATTCTAATTGCTTTGGATAGAAAGAAAGATGATGGCACCCCTACTGTGAAGCTTTGTGATTTTGACAGCGCAGTGCCACTAAGATCACCTTTGCATAGCTGCTGTATCGCTCATGTGGGAGCGCCTCCTCCTTATGTGTGCACTGGAACGCCACGATGGATGGCTCCAGAGGTTATGCGGACTATGTACAAAGAAAATACTTATGGATTGGAAGTTGATATCTGGTCATTTGGATGCTTACTTCTGGAGCTTCTCACGCTGCGTGTTCCATTTTCTGGGCTGTCTGATTTACAATTCCATGACATTCTACAGATGGGTAAACCACCACAATTAACAGAAGAACTGGAGGCCCTGAGTTCACTGAATGAACCCACGATGATTCGATCCGGTGATGAGCCAGACAAATCAGATACTGAGGCAGACTTGATGAAATTCCTTGTTGATTTGTTTCATAGGTGTGTGGAAGAAAATCCGGCCAAACGACCTACAGTAAAAGAAATCTATGAAATGCTGCTTGAACAAACATGCCGTCTAAAAGTACAAGATGTTGACAATAGTTAG | 3348 | 0.425 | MKLLQSDETASEACDLPEETQEEKPSSSSVVEGIDRGLDNGDAVLDVFGKTVEFPVLENAEDSVEGLYFYKNVYNLIPKSLGGLARLKTLKFFGNEINLFAPEFGNLTGLECLQMKISSPGIGGLPLHKLKGLKELELSKVPPRPSAFPILTEIAGLKSLSKLSICHFSIRYLPPEIGLLKKLEYLDLSFNKMKTLPSEISYLNGLISLKVSNNKLVELPSTMASLSGLENLDLSSNRLTSLGPLELGSMHKLQNLNLQFNKLRSMLQIPSWIHCNMEGNDRGECSDDFSSSSVEMDVYETSSLENDGLLSHASRNSSSSLLTSSSSSRCFATRKSGKKWKRRHYLQQKARQECLNNSRKWKGLNNSQLGKDMHRICESENQGSPAVENCSEAHPSDSVCLDNEAKKMVSEEAGNDSVIDDVNNNEVGIEKQFKDCSSRSEDENNASLCPLENGPSGQDNASSSESLKHISKSKRHSERDLDNPKPCKSRKPIGDSSSLSYKYSRLSFCGAEDHLPDGFYDAGRDRPFMPLESYEQNQCLASREVILVDRERDEDLDAITLSAQSLVRHLKQWNDFTKHGNQVALDSFQIASLLALFVSDHFGGSDRSAIVERTRKAVSGSNYHKPFVCTCSTGSNNGISASSKPVVNSEDITLASNSEKSLESLKRRRNSIIVPIGSVQFGVCRHRALLLKYLCDRMEPPVPCELVRGFLDFSPHAWNTIVVNRGDTQVRMIVDACRPHDIREEADPEFFCRYIPLSRTKVPISSDGTPGPGCSFPSLSTCDEFEKASSSTLVRCKFGSIEAAAKVRTLEVKESSPDKIKNFEYNCLGEVRILGALKHPCIVEMYGHQISYKWTLLEDGNPEHCVLRSAIFMEYIEGGSLKTYLDELSKAGEKHVPVELALYIAKDVACALSELHSKHIIHRDVKSENILIALDRKKDDGTPTVKLCDFDSAVPLRSPLHSCCIAHVGAPPPYVCTGTPRWMAPEVMRTMYKENTYGLEVDIWSFGCLLLELLTLRVPFSGLSDLQFHDILQMGKPPQLTEELEALSSLNEPTMIRSGDEPDKSDTEADLMKFLVDLFHRCVEENPAKRPTVKEIYEMLLEQTCRLKVQDVDNS | 1115 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral5444g00020 | 1115 | FunFam | Leucine-rich repeat protein kinase family protein | 53 | 296 | - | - | |
Pral5444g00020 | 1115 | Pfam | Ethylene-responsive protein kinase Le-CTR1 | 653 | 735 | - | - | |
Pral5444g00020 | 1115 | ProSiteProfiles | Protein kinase domain profile. | 787 | 1100 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pral5444g00020 | 1115 | MobiDBLite | consensus disorder prediction | 442 | 467 | - | - | |
Pral5444g00020 | 1115 | SUPERFAMILY | RNI-like | 67 | 281 | - | - | |
Pral5444g00020 | 1115 | Pfam | Protein kinase domain | 811 | 1098 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pral5444g00020 | 1115 | SMART | LRR_sd22_2 | 226 | 247 | - | - | |
Pral5444g00020 | 1115 | SMART | LRR_sd22_2 | 180 | 205 | - | - | |
Pral5444g00020 | 1115 | SMART | LRR_sd22_2 | 250 | 271 | - | - | |
Pral5444g00020 | 1115 | Pfam | Leucine rich repeat | 206 | 263 | IPR001611 | GO:0005515 | |
Pral5444g00020 | 1115 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 920 | 932 | IPR008271 | GO:0004672|GO:0006468 | |
Pral5444g00020 | 1115 | ProSiteProfiles | Leucine-rich repeat profile. | 182 | 203 | IPR001611 | GO:0005515 | |
Pral5444g00020 | 1115 | Gene3D | Transferase(Phosphotransferase) domain 1 | 782 | 1114 | - | - | |
Pral5444g00020 | 1115 | MobiDBLite | consensus disorder prediction | 468 | 489 | - | - | |
Pral5444g00020 | 1115 | ProSiteProfiles | Leucine-rich repeat profile. | 228 | 249 | IPR001611 | GO:0005515 | |
Pral5444g00020 | 1115 | SMART | serkin_6 | 779 | 1100 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pral5444g00020 | 1115 | Gene3D | Ribonuclease Inhibitor | 48 | 287 | IPR032675 | - | |
Pral5444g00020 | 1115 | SMART | LRR_bac_2 | 226 | 245 | - | - | |
Pral5444g00020 | 1115 | SMART | LRR_bac_2 | 180 | 199 | - | - | |
Pral5444g00020 | 1115 | SMART | LRR_bac_2 | 203 | 222 | - | - | |
Pral5444g00020 | 1115 | SMART | LRR_typ_2 | 226 | 249 | IPR003591 | - | |
Pral5444g00020 | 1115 | SMART | LRR_typ_2 | 250 | 272 | IPR003591 | - | |
Pral5444g00020 | 1115 | SMART | LRR_typ_2 | 180 | 203 | IPR003591 | - | |
Pral5444g00020 | 1115 | SMART | LRR_typ_2 | 84 | 106 | IPR003591 | - | |
Pral5444g00020 | 1115 | SUPERFAMILY | Protein kinase-like (PK-like) | 792 | 1101 | IPR011009 | - | |
Pral5444g00020 | 1115 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Pral5444g00020 | 1115 | FunFam | Leucine-rich repeat protein kinase family protein | 825 | 1106 | - | - | |
Pral5444g00020 | 1115 | MobiDBLite | consensus disorder prediction | 434 | 497 | - | - | |
Pral5444g00020 | 1115 | PANTHER | SERINE/THREONINE-PROTEIN KINASE SBK1 | 110 | 1105 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral5444g00020 | Pral-Chr5444 | 175256 | 183176 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral5444g00020 | 785 | 1100 | MAP Kinase Kinase Kinase | AT2G24360 | 29.022 | 9.52e-27 | 112 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | TKL-Pl-2 | Pral5444g00020 | Pkinase | 1.5e-39 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral5444g00020 | - | - | gmx:100811118 | 1546.56 |