Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5444g00019 ATGGAGGAGGGAGCCAAAATGGGGGCACGTGATTTCTGCTTCGAGTGCCTCCAACTTCGAATCAAATCCGATTTCTCGGAGCGACTCGTTTTCCACTATGGCATCTCCCCTTCCGCTTTTCCGTTTGGATCCTCAGCCGTCGTTGAGATTTCTAGTACCACGGCTGGTGAGGTTTCAGCTGGTCAATTTATATTGGACTACAGGCCCAGCCATGAGGAAGATTGTTTCACCAAATATATTGATGAATATAGTCTGGATAATGATGATTGCCGTACAAGTAATTATACACCTGGTGAAAGCCAGTATAATAATGGGTTCAATGGTGGTGTGCAAAGAGATGGAATGTCTTTGGTTGAGTCTGGAAGAAGAAAAACCTGTTGTAACCATTCTACAAGATTTTCGTGCTCAAGGACAGTTGCTGCACTGGCCCCAATTGCTCGTGTGGGAATCTCTTCCTATTCTACTTTTGAAGAGGTTGCAGCTGATTTCATGTCTGGTTCACTAGAGGATCGCATATTAGATTCACTTAGTCTCACAATCGAGGGGAAAGCATCTGGCCGGGAAAGCATAAATTTCCTTAATCTAATTGGTTTGCCATCATTTGAGGAAGATACTGTTCCAGGTTCGTTGAGGCATCCAAACATAGCTCCTGTTATTGCAATGTTGAAAACATCCAATCACGTTAACATGGTTCTTCCGAAGACCCCTTATACCTTGGAAAATATTCTTCACTATAACCCCGATGCCTTAGTGTCTGACTGGCATAAAAGGTTTCTTATATTTCAGCTACTCTCAGCGTTATGGTACCTACATGGTCTTGGTTTATCCCATGGGAATATATGTCCATCCAATGTCATGCTGACTGACTCATTGTGGTCTTGGCTGCGTTTGTGGAATGAACCTGAATTGGAATATGCTTTAAAGCCACTAGAGACTGAAAGAAATGGTTCTACCCAATCAAAAATTGGTTGTTTCAATGGGGGTTGCCAATCTGATAGCCTTTATGCAGATCTAAAGCTTTCTCCATCTGTAGATTGGCATTCTAGCTTTACTAAGTGGTGGAGAGGTGAATTAAGTAATTTTGAATATTTACTAATCTTAAATAAATTGGCAGGGAGAAGGTGGGGGGATCACACATTTCATCCAGTAATGCCTTGGGTAATAGACTTTAGCACAAAACCAGATGAGAATTTTGACGCAGGATGGAGAGACTTGAGCAAGAGCAAATGGCGCTTGGCCAAAGGTGATGAACAGTTAGATTTTACCTATTCAACTTCTGAGATCCCTCATCATGTATCAGATGAATGTCTGTCTGAATTGGCTGTCTGCAGTTACAAAGCAAGACGGCTACCTCTGAATGTTCTTCGTATGGCTGTTCGTACAGTGTATGAACCTAATGAGTATCCTTCTACAATGCAGAGGCTCTACCAATGGACCCCTGATGAATGCATTCCGGAGTTCTATTGTGATAGTCAAATTTTTAAGTCAATTCATGACGGTATGTCAGACTTGGCCGTACCTTCATGGGCAAAGAGCCCTGAAGATTTCATTAAATTGCATCGTGATGCTTTAGAAAGTAATAGGGTTTCGTTGCAACTTCATCAATGGATAGATATCACATTTGGGTACAAAATGTCTGGCGAGGCAGCTATTGCTGCCAAGAATGTCATGCTTCCTGTATCAGAACCCATGATGCCAAGATCAACAGGACGCCGGCAGCTCTTCACACGTCCACACCCCATTCGTCATGGAAATACCAACATAACATGTCATTCTACCACTAACAATGCCAAGTTTTGTAGACAAGTGAATGTATTGCAAAATGAGATCCTATCTGAAGCTGGTTATCTGCAAAAATTAGAAGAAGCATCAAAATTTTCTGAGCATGCTAGGCATTTGAGTGCTTGTTATCATGATCCATTAAATACGCTAGAGAGGGAAATCTCATCTTCAAAAGATGCAACAACGGAGACACTTAGCCAAGTTATGTCCAAAGTATCTATGATAGGCAAAAATCATATAGAGCATTCAAAAATGGATCTAATCTGTTTTCTTCAGCATATAAAGGAGGAAGATGAATGTTCATCAGGATATCCAGACTTTTTGCTTTGGAGGCAGAAATTTTCTTGTTCAAAACTCACCTCTGAAGATGTTGCAAGAGACATATTTTCTGTTGGTTGTATCCTAGCCGAACTCTATCTGTGTAGGCCTCTCTTTGATTCAGCCTCATTGGCAATATACTTGGAGGATGGAACCTTACCAGCATTTTTACAGGAACTACCTCCTCATATTAAATTACTTGTCCAAGCATGCATTCGAAAAGAATGGACAAGGAGGCCAACAGTCAAAACTCTTCTGGAATCACCTTATTTTCCAAAGACTGTAAAATCTACCTACCTGTTTCTTGCCCCCCTTCAGCTTCTGGCTAAGAATGAAACCCGCCTTCGTTATGCTGCAAATTTTGCCAAGCAGGGAGCCCTCAAGTTAATGGGCACATTTGCAGCTGAAATGTGTGCCCCTTTTTGCTTGCCACTTGTATTAGATTCAGTGAATGACACTGAAGCTGAATTGGCCAATGTACTAATTAGAGAGTTCATAAAATGCTTAACAGCACAAGCAGTGAAAACACTAGTCTTACCAACCATCCAAAAAATCTTGCAGACTACAGGTGATTCTCATTTGAAGGTTTCTCTTTTACAAGATACATTTGTATGTGAAATATGGAATGGAGTTGGTAAACAAATATACCTGGAAACTATTCATCCCTTGGTCTTGTCAAACTTGTATGTTTCTCCGCACAAAACTTCAGCTGTCTCCGCTTCTGTGTTGTTAATTGGTTCCAGTGAGGAGCTTGGTGTACCCATTACCATCCATCAGACAATCTTGCCTCTGGTTCACTGCTTCGGGAAAGGACTGTGTGCTGATGGAATTGATGTGCTGGTCAGAATTGGTGGTGTTTTTGGCGAATCCTTTATTGTCAGACAGTTGCTGCCAATACTTAAAAACATGGTTCATTACTTCATTGATATATCATGCATGAATAAGCCGGATCCTGTCCAGAGCTGGAGTGCTTTAGCACTTATTGATTGTATGATGGCATTAGATGGTCTTGTGGCTTTCCTCACACAAGAATCTATTGTGAAGGAACTACTTGAAGATCAAAGGTGTCTATACATTGAGGTTCTTAAGCAGAAACATATGGAAATTGCGGTGCTTCAGGTTGCTGCTACTACTTTATTTGCAATTTGTCAACGAATTGGACAAGACTCGACGGTGCTTCATATTCTACCAAAACTCAAAGAACTATTTGATGAGCTTGCGTTCTCAAAGGAAGTTGCTGAAGGTTCTGCCACTGCTGGCAGAAGCTCGAAGATTGCAAAGTTAAAAATTGGTGGGGATTTACACATTGAAAGTCGAATGGATCTAGTGTTGCTTCTTTATCCTTTCTTTGCATCTCTTCTTGGAATAGAAAAACTTCGTCAATGTTGTGCTACATGGTTGCTCCTTGAACAATTTCTTCAACGTCGTCATAATTGGAAGTGGGAATATTCAGGGGAGTCATCAAGAAGTGGTTCAGAAAATATAATTGCTCGAAGACCTACAACTACAAGGGGATTTAAAAATGAATACAATCCGGCAAAGTTATTGCTTAATGGGGTTGGCTGGTCAATTCCACAATCCCAAGGAAGTAGAAGTTCCAAAAACCTGATCTCCCCACGACGATCAAATGCAGTTCATCAAAGTCCAACCTTAGTGCATGAAGGAGTGTCATATCAAATGAATCATGAACCCTGGTTTTGGTTCCCTAGTCCAGCTACTATCTGGGATGGACCTGAATTTCTTGGGCGTGTGGGTCTTCAAAAAGATGACCTTCCATGGAAGATCAGAGCATCTGTTATATACTCTACACGTGCACATCATGGAGCTGTGAGGTCTTTAGCTGTATGTCAAGATGAGTGTACTGTTTTCACAGCAGGTGTTGGCCAAGGTTATAAAGGAATTGTTCAGAAGTGGGAACTTAGTCGAACTAACTGTTTATCTGGCTATTATGGCCATGAGGAGGTTGTGAACGATATATGTATCTTATCATCCAGTGGAAGAGTGGCATCTTGTGACGGAACCATTCATGTTTGGAATAGTCAAACGGGGAAGACAATATCAGTATTTGCTGAGTCTCCAATAGAAGTTGCCCACCTTCCAAGCCATGTATCCTCTCAGTCAAAGATAAATAGTGACCAGGCTAATGTTCTTAATATGAATGCATTATCAAACGGAATATTGTCTAGTGCCTTTGATTCAAGCCTTTATACTTGTATGCATCTATTAGACTCTCCCGAAATGCTCGCAGTTGGCACTGGAAATGGGTCTCTCAGGTTCATTGATGTTGCTCGAGGTCAAAAGCTTCATATCTGGAGAGGGGAATCTAATGAATCTAGTTTTCCTTCTCTTATTTCTGCCATTTGTTCCTCTAGGGCTGACAAGATGCAAACAGGCGGAGCTTCTACTTTGCCATCTTTAATTGCAACTGGTCTAAGTTCTGGTCATTGTAAATTATTTGATGCGAAGAGTGGAAATGTCATTGCCTCATGGCGAGCTCATGATGGATATGTGACTAAGCTGGCAGCACCTGAAGACCATCTGCTCATTTCTAGCTCTCTTGACAAAACATTACGAGTCTGGGACTTAAGGATGAATTTCCAATCGCAGCCCGTCACTTTCAGAGGTCACTCAGATGGCATATTAAATTTCTCCATTTGGGGCCAAGATGTTATTTCAATTTCCAAAAGTAGGATTGGACTTCTATCCTTGTCTAGATCTGCTGATGAACCAGACGGACCACATCACATTATTCCTCAGAAACTCTACACATCAGATAATGGATCAAAAAGCTTGTCATCATTGTCAAGTATTAGTATCCTTCCATTTTCTCGATTTTTTCTTGTTGGAACAGAAGATGGTTATCTTAGCATCTGCTGTTAG 4980 0.412 MEEGAKMGARDFCFECLQLRIKSDFSERLVFHYGISPSAFPFGSSAVVEISSTTAGEVSAGQFILDYRPSHEEDCFTKYIDEYSLDNDDCRTSNYTPGESQYNNGFNGGVQRDGMSLVESGRRKTCCNHSTRFSCSRTVAALAPIARVGISSYSTFEEVAADFMSGSLEDRILDSLSLTIEGKASGRESINFLNLIGLPSFEEDTVPGSLRHPNIAPVIAMLKTSNHVNMVLPKTPYTLENILHYNPDALVSDWHKRFLIFQLLSALWYLHGLGLSHGNICPSNVMLTDSLWSWLRLWNEPELEYALKPLETERNGSTQSKIGCFNGGCQSDSLYADLKLSPSVDWHSSFTKWWRGELSNFEYLLILNKLAGRRWGDHTFHPVMPWVIDFSTKPDENFDAGWRDLSKSKWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLNVLRMAVRTVYEPNEYPSTMQRLYQWTPDECIPEFYCDSQIFKSIHDGMSDLAVPSWAKSPEDFIKLHRDALESNRVSLQLHQWIDITFGYKMSGEAAIAAKNVMLPVSEPMMPRSTGRRQLFTRPHPIRHGNTNITCHSTTNNAKFCRQVNVLQNEILSEAGYLQKLEEASKFSEHARHLSACYHDPLNTLEREISSSKDATTETLSQVMSKVSMIGKNHIEHSKMDLICFLQHIKEEDECSSGYPDFLLWRQKFSCSKLTSEDVARDIFSVGCILAELYLCRPLFDSASLAIYLEDGTLPAFLQELPPHIKLLVQACIRKEWTRRPTVKTLLESPYFPKTVKSTYLFLAPLQLLAKNETRLRYAANFAKQGALKLMGTFAAEMCAPFCLPLVLDSVNDTEAELANVLIREFIKCLTAQAVKTLVLPTIQKILQTTGDSHLKVSLLQDTFVCEIWNGVGKQIYLETIHPLVLSNLYVSPHKTSAVSASVLLIGSSEELGVPITIHQTILPLVHCFGKGLCADGIDVLVRIGGVFGESFIVRQLLPILKNMVHYFIDISCMNKPDPVQSWSALALIDCMMALDGLVAFLTQESIVKELLEDQRCLYIEVLKQKHMEIAVLQVAATTLFAICQRIGQDSTVLHILPKLKELFDELAFSKEVAEGSATAGRSSKIAKLKIGGDLHIESRMDLVLLLYPFFASLLGIEKLRQCCATWLLLEQFLQRRHNWKWEYSGESSRSGSENIIARRPTTTRGFKNEYNPAKLLLNGVGWSIPQSQGSRSSKNLISPRRSNAVHQSPTLVHEGVSYQMNHEPWFWFPSPATIWDGPEFLGRVGLQKDDLPWKIRASVIYSTRAHHGAVRSLAVCQDECTVFTAGVGQGYKGIVQKWELSRTNCLSGYYGHEEVVNDICILSSSGRVASCDGTIHVWNSQTGKTISVFAESPIEVAHLPSHVSSQSKINSDQANVLNMNALSNGILSSAFDSSLYTCMHLLDSPEMLAVGTGNGSLRFIDVARGQKLHIWRGESNESSFPSLISAICSSRADKMQTGGASTLPSLIATGLSSGHCKLFDAKSGNVIASWRAHDGYVTKLAAPEDHLLISSSLDKTLRVWDLRMNFQSQPVTFRGHSDGILNFSIWGQDVISISKSRIGLLSLSRSADEPDGPHHIIPQKLYTSDNGSKSLSSLSSISILPFSRFFLVGTEDGYLSICC 1659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5444g00019 1659 Gene3D Transferase(Phosphotransferase) domain 1 693 796 - -
Pral5444g00019 1659 SUPERFAMILY BEACH domain 342 582 IPR036372 -
Pral5444g00019 1659 Pfam WD domain, G-beta repeat 1525 1561 IPR001680 GO:0005515
Pral5444g00019 1659 Pfam WD domain, G-beta repeat 1344 1379 IPR001680 GO:0005515
Pral5444g00019 1659 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1530 1563 - -
Pral5444g00019 1659 Gene3D BEACH domain 343 582 IPR036372 -
Pral5444g00019 1659 ProSiteProfiles BEACH domain profile. 338 607 IPR000409 -
Pral5444g00019 1659 CDD Beach 352 582 IPR000409 -
Pral5444g00019 1659 SUPERFAMILY Protein kinase-like (PK-like) 208 292 IPR011009 -
Pral5444g00019 1659 Gene3D Transferase(Phosphotransferase) domain 1 202 326 - -
Pral5444g00019 1659 Pfam Beige/BEACH domain 352 562 IPR000409 -
Pral5444g00019 1659 SMART WD40_4 1523 1561 IPR001680 GO:0005515
Pral5444g00019 1659 SMART WD40_4 1618 1659 IPR001680 GO:0005515
Pral5444g00019 1659 SMART WD40_4 1342 1379 IPR001680 GO:0005515
Pral5444g00019 1659 SMART WD40_4 1296 1339 IPR001680 GO:0005515
Pral5444g00019 1659 SMART WD40_4 1412 1461 IPR001680 GO:0005515
Pral5444g00019 1659 SMART WD40_4 1464 1520 IPR001680 GO:0005515
Pral5444g00019 1659 SMART Beach_2 350 582 IPR000409 -
Pral5444g00019 1659 Gene3D - 1286 1404 IPR015943 GO:0005515
Pral5444g00019 1659 SUPERFAMILY WD40 repeat-like 1287 1657 IPR036322 GO:0005515
Pral5444g00019 1659 ProSiteProfiles Trp-Asp (WD) repeats profile. 1530 1563 IPR001680 GO:0005515
Pral5444g00019 1659 SUPERFAMILY Protein kinase-like (PK-like) 717 821 IPR011009 -
Pral5444g00019 1659 Gene3D - 1412 1659 IPR015943 GO:0005515
Pral5444g00019 1659 ProSitePatterns Trp-Asp (WD) repeats signature. 1548 1562 IPR019775 -
Pral5444g00019 1659 PANTHER GH12955P 10 1659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5444g00019 Pral-Chr5444 152791 162001 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDKL-Cr Pral5444g00019 Beach 5.6e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5444g00019 K17601 - gmx:100809116 2565.42