Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5444g00007 ATGAACGCCGGCACCGCCACCTTCCGCTCCATTCTCGACAAACCCCTCAGTCAGCTCACTGAGGATGACATTTCCCAGCTCACCCGTGAAGATTGTCGCAGGTTCCTCAAAGAAAAAGGAATGCGTCGGCCTTCTTGGAACAAATCGCAGGCGATCCAGCAAGTTATTTCCCTCAAAGCTTTGCTCGACCCAGCTGACGACGATTCCGGCACCGGACCCATACGGAGATTCCCTTTTGTTCCCGCTCAAGAAAATACCCCACCTGATAATCTAGATGTGACTGGTAGCGGCAGCGGCGGCGGCGGCGGCGCTATTGTCGCCGGAGCTGAGGCGACATCGAATGGGCCGTCTGAGGAGCCGGCTTTCCAACCTGCCGAAGAACTTCCCAAATCTGTGTCATCTGGAGAGAAACCAACTAACATTGAAACAAATGAGAAGGTCGTCAGTCCCAGAGAGTGTGCAACTAGTGGGCCTATTGGGCAAATGACAATTTTCTATTGCGGTAAGGTGAATGTGTATGATGGGGTGCCGCCTGATAAGCCATATGTGGATTTGCAGGCACGGGCAATCATGCAGCTTGCAGCAAGTCCCATCTATATACCTCAAGATGAACCATTCAAAAGAAGTACATCAGTCTGGCCTTGTCATTTACAGATGGACAAAGATATACTTGTCCCAATTGATGGCACAATCTCTCAGTTTTCTCAAGCGGAGAAGACGGTGGAGTATCCTTTGCATTACCGGGAGAAGGGGAGCACAGCTCGTGATTCTGATGTAGATGGTCAAGCAAGCAGGAAAGTGTCATTGCAGCGATATTTAGAAAAGCGAAAGGACAGGGGAAGATTAAAGAGCAAGAAATTTACGGGAGTAACTTCTTCTAACATGGAAATGTATTTCAGTCATCAAGTGAAGGCCCATGCCTCAAATGGGAATTCAAGCCGCAGTAGCACAAGCTCTCCGCCACAGCCAAGGCTGCCTCAAGCTTCTGGTGGCTCAGCTGACAACCAGCCAAAGATTGCCCTTCCTGTTGATCTCAATCACAAAGATTTTCAAGAGTGCTAA 1062 0.4953 MNAGTATFRSILDKPLSQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQVISLKALLDPADDDSGTGPIRRFPFVPAQENTPPDNLDVTGSGSGGGGGAIVAGAEATSNGPSEEPAFQPAEELPKSVSSGEKPTNIETNEKVVSPRECATSGPIGQMTIFYCGKVNVYDGVPPDKPYVDLQARAIMQLAASPIYIPQDEPFKRSTSVWPCHLQMDKDILVPIDGTISQFSQAEKTVEYPLHYREKGSTARDSDVDGQASRKVSLQRYLEKRKDRGRLKSKKFTGVTSSNMEMYFSHQVKAHASNGNSSRSSTSSPPQPRLPQASGGSADNQPKIALPVDLNHKDFQEC 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5444g00007 353 MobiDBLite consensus disorder prediction 304 353 - -
Pral5444g00007 353 ProSiteProfiles Tify domain profile. 155 190 IPR010399 -
Pral5444g00007 353 Pfam Jas motif 262 279 IPR018467 -
Pral5444g00007 353 MobiDBLite consensus disorder prediction 109 138 - -
Pral5444g00007 353 MobiDBLite consensus disorder prediction 304 334 - -
Pral5444g00007 353 Pfam tify domain 161 195 IPR010399 -
Pral5444g00007 353 SMART tify_2 155 196 IPR010399 -
Pral5444g00007 353 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 9 296 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5444g00007 Pral-Chr5444 33932 39636 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5444g00007 1 308 Tify Gene Family AT4G14720 47.003 2.53e-73 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pral5444g00007 tify 7.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5444g00007 - - pcin:129296496 625.55