Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5444g00006 ATGAACGCCGGCACCGCCACCTTCCGCTCCATTCTCGACAAACCCCTCAGTCAGCTCACTGAGGATGACATTTCCCAGCTCACCCGTGAAGATTGTCGCAGGTTCCTCAAAGAAAAAGGAATGCGTCGGCCTTCTTGGAACAAATCGCAGGCGATCCAGCAAGTTATTTCCCTCAAAGCTTTGCTCGACCCAGCTGACGACGATTCCGGCACCGGACCCATACGGAGATTCCCTTTTGTTCCCGCTCAAGAAAATACCCCACCTGATAATCTAGATGTGACTGGTAGCGGCAGCGGCGGCGGCGGCGGCGCTATTGTCGCCGGAGCTGAGGCGACATCGAATGGGCCGTCTGAGGAGCCGGCTTTCCAACCTGCCGAAGAACTTCCCAAATCTGTGTCATCTGGAGAGAAACCAACTAACATTGAAACAAATGAGAAGGTCGTCAGTCCCAGAGTTACTTATTGTGGTTACAGAGAGTGTGCAACTAGTGGGCCTATTGGGCAAATGACAATTTTCTATTGCGGTAAGGTGAATGTGTATGATGGGGTGCCGCCTGATAAGGCACGGGCAATCATGCAGCTTGCAGCAAGTCCCATCTATATACCTCAAGATGAACCATTCAAAAGAAGTACATCAGTCTGGCCTTGTCATTTACAGATGGACAAAGATATACTTGTCCCAATTGATGGCACAATCTCTCAGTTTTCTCAAGCGGAGAAGACGGTGGAGTATCCTTTGCATTACCGGGAGAAGGGGAGCACAGCTCGTGATTCTGATGGTCAAGCAAGCAGGAAAGTGTCATTGCAGCGATATTTAGAAAAGCGAAAGGACAGGGGAAGATTAAAGAGCAAGAAATTTACGGGAGTAACTTCTTCTAACATGGAAATGTATTTCAGTCATCAAGTGAAGGCCCATGCCTCAAATGGGAATTCAAGCCGCAGTAGCACAAGCTCTCCGCCACAGCCAAGGCTGCCTCAAGCTTCTGGTGGCTCAGCTGACAACCAGCCAAAGATTGCCCTTCCTGTTGATCTCAATCACAAAGATTTTCAAGAGTGCTAA 1059 0.4939 MNAGTATFRSILDKPLSQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQVISLKALLDPADDDSGTGPIRRFPFVPAQENTPPDNLDVTGSGSGGGGGAIVAGAEATSNGPSEEPAFQPAEELPKSVSSGEKPTNIETNEKVVSPRVTYCGYRECATSGPIGQMTIFYCGKVNVYDGVPPDKARAIMQLAASPIYIPQDEPFKRSTSVWPCHLQMDKDILVPIDGTISQFSQAEKTVEYPLHYREKGSTARDSDGQASRKVSLQRYLEKRKDRGRLKSKKFTGVTSSNMEMYFSHQVKAHASNGNSSRSSTSSPPQPRLPQASGGSADNQPKIALPVDLNHKDFQEC 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5444g00006 352 ProSiteProfiles Tify domain profile. 162 197 IPR010399 -
Pral5444g00006 352 MobiDBLite consensus disorder prediction 303 333 - -
Pral5444g00006 352 SMART tify_2 162 197 IPR010399 -
Pral5444g00006 352 MobiDBLite consensus disorder prediction 250 286 - -
Pral5444g00006 352 MobiDBLite consensus disorder prediction 109 138 - -
Pral5444g00006 352 Pfam tify domain 168 196 IPR010399 -
Pral5444g00006 352 Pfam Jas motif 261 278 IPR018467 -
Pral5444g00006 352 MobiDBLite consensus disorder prediction 303 352 - -
Pral5444g00006 352 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 9 295 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5444g00006 Pral-Chr5444 33932 39636 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5444g00006 1 307 Tify Gene Family AT4G14720 46.372 1.93e-71 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pral5444g00006 tify 1.1e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5444g00006 - - pcin:129296496 590.497