Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5444g00004 ATGAACGCCGGCACCGCCACCTTCCGCTCCATTCTCGACAAACCCCTCAGTCAGCTCACTGAGGATGACATTTCCCAGCTCACCCGTGAAGATTGTCGCAGGTTCCTCAAAGAAAAAGGAATGCGTCGGCCTTCTTGGAACAAATCGCAGGCGATCCAGCAAGTTATTTCCCTCAAAGCTTTGCTCGACCCAGCTGACGACGATTCCGGCACCGGACCCATACGGAGATTCCCTTTTGTTCCCGCTCAAGAAAATACCCCACCTGATAATCTAGATGTGACTGGTAGCGGCAGCGGCGGCGGCGGCGGCGCTATTGTCGCCGGAGCTGAGGCGACATCGAATGGGCCGTCTGAGGAGCCGGCTTTCCAACCTGCCGAAGAACTTCCCAAATCTGTGTCATCTGGAGAGAAACCAACTAACATTGAAACAAATGAGAAGGTCGTCAGTCCCAGAGTTACTTATTGTGGTTACAGAGAGTGTGCAACTAGTGGGCCTATTGGGCAAATGACAATTTTCTATTGCGGTAAGGTGAATGTGTATGATGGGGTGCCGCCTGATAAGCCATATGTGGATTTGCAGGCACGGGCAATCATGCAGCTTGCAGCAAGTCCCATCTATATACCTCAAGATGAACCATTCAAAAGAAGTACATCAGTCTGGCCTTGTCATTTACAGATGGACAAAGATATACTTGTCCCAATTGATGGCACAATCTCTCAGTTTTCTCAAGCGGAGAAGACGGTGGAGTATCCTTTGCATTACCGGGAGAAGGGGAGCACAGCTCGTGATTCTGATGGTCAAGCAAGCAGGAAAGTGTCATTGCAGCGATATTTAGAAAAGCGAAAGGACAGGGGAAGATTAAAGAGCAAGAAATTTACGGGAGTAACTTCTTCTAACATGGAAATGTATTTCAGTCATCAAGTGAAGGCCCATGCCTCAAATGGGAATTCAAGCCGCAGTAGCACAAGCTCTCCGCCACAGCCAAGGCTGCCTCAAGCTTCTGGTGGCTCAGCTGACAACCAGCCAAAGATTGCCCTTCCTGTTGATCTCAATCACAAAGATTTTCAAGAGTGCTAA 1077 0.493 MNAGTATFRSILDKPLSQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQVISLKALLDPADDDSGTGPIRRFPFVPAQENTPPDNLDVTGSGSGGGGGAIVAGAEATSNGPSEEPAFQPAEELPKSVSSGEKPTNIETNEKVVSPRVTYCGYRECATSGPIGQMTIFYCGKVNVYDGVPPDKPYVDLQARAIMQLAASPIYIPQDEPFKRSTSVWPCHLQMDKDILVPIDGTISQFSQAEKTVEYPLHYREKGSTARDSDGQASRKVSLQRYLEKRKDRGRLKSKKFTGVTSSNMEMYFSHQVKAHASNGNSSRSSTSSPPQPRLPQASGGSADNQPKIALPVDLNHKDFQEC 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5444g00004 358 ProSiteProfiles Tify domain profile. 162 197 IPR010399 -
Pral5444g00004 358 MobiDBLite consensus disorder prediction 309 339 - -
Pral5444g00004 358 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 9 301 IPR040390 -
Pral5444g00004 358 Pfam Jas motif 267 284 IPR018467 -
Pral5444g00004 358 Pfam tify domain 168 202 IPR010399 -
Pral5444g00004 358 SMART tify_2 162 203 IPR010399 -
Pral5444g00004 358 MobiDBLite consensus disorder prediction 109 138 - -
Pral5444g00004 358 MobiDBLite consensus disorder prediction 309 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5444g00004 Pral-Chr5444 33932 39636 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5444g00004 1 313 Tify Gene Family AT4G14720 45.511 7.82e-69 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pral5444g00004 tify 8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5444g00004 - - pcin:129296496 609.757