Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral543g00002 ATGGTGGGTAAGGACGATGCTCGAAAAATGTTCTGGCGGTCGGCCTCTTGGTCGGCGTCTCGCTCCGCCGCACATAATACGGACGGCGGGGTAGATCCGGATGGCAGTGTCGGTAACATCAACGGGGAAGCTCGTAGGTATCCTCCCGCTCCATTAACCCCTCGATCGCAGCAAAATTGCAAGGCTCGGTCGTTTTTGCCGCCGTTACAGCCTCTTTCAATTGCTCGGAGGAGCTTGGATGAGTGGCCGAAAGCGAGTTCCGATGATATCGGCGAGTGGCCTCATCCCCCAACTCCTAGTGGGAGAGGTAATGGAGAGAGGTTGAAGCTTGATTTATCTTCGATTCAGCGAAACCCTGATAAGAATGCTGGGCTTGTGAAAAGAGATAAGATTGCATACTTTGACAAAGAATGCTCAAAAGTGGCTGAACATATTTATCTTGGAGGAGACGCTGTTGCTAGGGATAGGGATATATTGAAGCAAAATGGGATTACTCATATTTTGAACTGTGTGGGCTTTGTTTGTCCCGAGTACTTCAAATCTGATTTTGTATATAGAACGTTGTGGTTGCAAGATAGTCCAACGGAAGATATTACTAGCATCCTGTATGATGTCTTCGACTACTTTGAAGATGTTAGGGAACAAAATGGAAGGGTGTTTGTGCATTGTTGCCAGGGTGTATCTCGGTCCACCTCTCTTGTGATTGCATACCTTATGTGGAGGGAAGGGCAGAGTTTTGAAGATGCTTTCCAGTATGTGAAGGCAGCAAGAGGTATTGCTGATCCAAATATGGGTTTTGCCTGCCAATTACTGCAATGTCAAAAAAGGGTTCATGCATTCCCACTTAGCCCAAGCTCTTTGCTGAGAATGTATAGAATAGCCCCACACTCACCTTATGATCCATTGCATCTTGTCCCCAAAATGTTGACAAATCCTTCTCCATCTGCTCTGGATTCTAGAGGTGCATTTATCGTACATATGCCTTCTGCTATATATGTTTGGATTGGTAACAATTGTGAGGCCATCATGGAAAGGGATGCTAGAGGGGCTGCCTGTCAGATTGTTCGCTATGAGAAAGTGCAAGGTTCAATTTCATTAATCAAGGAAGGTGAAGAACCGGATTACTTTTGGGATAGCTTTTCTAAGTTTTTGCCCTTGATGGAAAAATCTGATAATAGAATGGAAAATGGCAAATCAACCAGAAATATTTCTCCGGGTAATAGGAGGGTGGACTCATATAATGTTGATTTTGAAGTTTTCCAGAAAGCTATCAGGGGAGGTTTTGTGCCTCCATTTGCTTCAGCAGAGGATGAACTTGAAACCCACCTTCCTGCCCGGGAGAGTTGTTGGAGTGTGTTGAGGCGTAAGTTTGCCTCTGCCAGTATGAAGGAATTTGTCTCAGAACCTAAACTATCATATTCAAGGGTTTATTTAGATTCAATGTCAGGTACTCATTCATCCATAAACTCATCCCCATCATCATCACTGTCATCAACTACATCTTCTTCTTCATCCCCTTATCTCTCACCAGATTCCATTTCGTCTGACTCGAGCAATAGTTCAAAATGTTCAGAAACATCTCTTGGTTCTCCTTATGCAGCTTTGATATCTACGCCAGCATCCTCATCTTTATCTAACTTTTCTAACTTGTCCCTCCATTCATCTAGCTGTTCTTCTCAGCCAGTAACAAAAGGTGTAGAAAGTTGTAGTGTCAAATTGGCATCACAGCCCTGTCATCAGTCAGCCTCCCTGCTATTGAAAAAACCTTCAACTTCTCTTGCTGAGCGCAGAGGCGGTCTGTCAAAGTCTTTGAAGTTACCACTGATGAATGACAAAACCCTGGTGATGAATAGATCATCAACCTTTAATGCTACTCGAGAAGAAGATGGTGCTGTCATGAATGGCAACACTAGCCATTTGCATCAACCAGGTAGTATTGAAAATTCAACTGATGTAAACGACCATGTCAAGGGTAGAGGATTGGATTCAACTCAACAGTGCGAGGTGTTATTATGTTCAGGTGCTGCAGATAGTGTTGACCACAACAAAGCTTCATTTGTTGGAAACTGTGGTGACCCTTGGGTGAGAAGCTCTTCCAGAGAAGACATAAAGTCTACTTCATCAAATGGAACGGATAGAAGTGGTCTACTACAATCTAATAATAAACAAAATTTAGTTTATCAATGGCCCAGCTTAGAGAAGAGTGTGACATTCAGTGCAAGTCATTTGGATTCTAAAGCAGCTTTTGTTATTTTCTCTTCGAGTGCAAGTTCTGGTAAACATGCAAGAAACATTTTATATTTTTGGCTGGGAAGTTCTTTCAGCTGTGCTACATCTCAAGTTCGGTTAGATGGTAACAGAGAGATAGATTGTCGAGGAGGAGTTGACTGGAATCAAGTTGGTTGTGATGTCCTTGCTCATTTTGGTTTGCCAAATGACACTATCGTCAAGATTGTTAAAGAGAATGAAGAACCGGAAGAGTTTCTTGCCTTGCTGGGTACATTGGAGCACAGCCAACTTAGGATATCCCGGCTTTCAAGCATCTTCTGA 2550 0.4322 MVGKDDARKMFWRSASWSASRSAAHNTDGGVDPDGSVGNINGEARRYPPAPLTPRSQQNCKARSFLPPLQPLSIARRSLDEWPKASSDDIGEWPHPPTPSGRGNGERLKLDLSSIQRNPDKNAGLVKRDKIAYFDKECSKVAEHIYLGGDAVARDRDILKQNGITHILNCVGFVCPEYFKSDFVYRTLWLQDSPTEDITSILYDVFDYFEDVREQNGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRIAPHSPYDPLHLVPKMLTNPSPSALDSRGAFIVHMPSAIYVWIGNNCEAIMERDARGAACQIVRYEKVQGSISLIKEGEEPDYFWDSFSKFLPLMEKSDNRMENGKSTRNISPGNRRVDSYNVDFEVFQKAIRGGFVPPFASAEDELETHLPARESCWSVLRRKFASASMKEFVSEPKLSYSRVYLDSMSGTHSSINSSPSSSLSSTTSSSSSPYLSPDSISSDSSNSSKCSETSLGSPYAALISTPASSSLSNFSNLSLHSSSCSSQPVTKGVESCSVKLASQPCHQSASLLLKKPSTSLAERRGGLSKSLKLPLMNDKTLVMNRSSTFNATREEDGAVMNGNTSHLHQPGSIENSTDVNDHVKGRGLDSTQQCEVLLCSGAADSVDHNKASFVGNCGDPWVRSSSREDIKSTSSNGTDRSGLLQSNNKQNLVYQWPSLEKSVTFSASHLDSKAAFVIFSSSASSGKHARNILYFWLGSSFSCATSQVRLDGNREIDCRGGVDWNQVGCDVLAHFGLPNDTIVKIVKENEEPEEFLALLGTLEHSQLRISRLSSIF 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral543g00002 849 Gene3D Protein tyrosine phosphatase superfamily 117 279 IPR029021 -
Pral543g00002 849 MobiDBLite consensus disorder prediction 15 67 - -
Pral543g00002 849 SMART dsp_5 137 276 IPR020422 GO:0006470|GO:0008138
Pral543g00002 849 MobiDBLite consensus disorder prediction 484 520 - -
Pral543g00002 849 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 129 278 IPR029021 -
Pral543g00002 849 Pfam Dual specificity phosphatase, catalytic domain 145 275 IPR000340 GO:0008138|GO:0016311
Pral543g00002 849 SUPERFAMILY Actin depolymerizing proteins 734 834 - -
Pral543g00002 849 Gene3D Severin 288 384 IPR029006 -
Pral543g00002 849 PANTHER MKPA PROTEIN 7 832 - -
Pral543g00002 849 MobiDBLite consensus disorder prediction 697 717 - -
Pral543g00002 849 MobiDBLite consensus disorder prediction 700 717 - -
Pral543g00002 849 ProSitePatterns Tyrosine specific protein phosphatases active site. 221 231 IPR016130 GO:0016311|GO:0016791
Pral543g00002 849 SUPERFAMILY Actin depolymerizing proteins 284 395 - -
Pral543g00002 849 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 196 257 IPR000387 GO:0016311|GO:0016791
Pral543g00002 849 ProSiteProfiles Dual specificity protein phosphatase domain profile. 137 279 IPR020422 GO:0006470|GO:0008138
Pral543g00002 849 CDD DSP 138 272 - -
Pral543g00002 849 MobiDBLite consensus disorder prediction 85 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral543g00002 Pral-Chr543 36791 45236 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral543g00002 1 173 Protein tyrosine phosphatase (PTP) family AT3G55270 65.608 1.85e-70 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral543g00002 - - vum:124838930 1034.63