Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5438g00001 ATGGGTTGCATTTTCTGTAAGGCACGCCACTTTGGCGCAATGGGTCAACAGAACATTAATGGAGGTCGGGCACGAATGGATAAGGGACAGAAAAAGGAAAAAAAGGTACCTTCGATCTTAACGCATCTTGTGGATCAAAAGGAGCGTAAGGATCTTCCAACATTTGAATCATACATTGTGGAAGAGGAAGTATGCAAAGGTGCTAATGGCGTTGTTTACAAGGCAAAGAGTAAGAAAGATGGAGCCACGGTTGCAATTAAATGTACCCCATTAAAACAAGGTCCTGCTGCTGAAGCTCACGAGCAACGTCTTGATAAGGAGTGGAAAGTGCTGAAGCAATTTCGAGGCAAAAAAAATAGTATCATTAACTATGAAGACAGCTTCAAGAAAGGAAATACTCATTACTTTGTTCTAGAATATATTATGCACGACGAGCCTAAGGTGTTAAAGGAGAAAATTAAAACTGATCAACTCCGACGGTATGGTTACTGCATGTTCCGGGCTCTTGCAGCACTTCACAAGGGGGGAGTAATACACGGAGATGTTAAACCTGGCAATTTCCTTTTCTCCCGTAAGCGGAACGAAGGGTATCTGACTGGTTTCAATCATGCCAGGTTTCCGGATAAGAACCCTGTCGACGGCTCTCCCATGCCTTCAAAACAACCAATTGCCAATGATGCCGCTGGTCCTGGAAAAGGTCCTTGGGTGGGAACAGGGGGCTTTCGGGCTCCAGAGGTGTTGTTCAGGTCTCCACATCAAGGTCCTAAGCTTGACATCTGGTCTGCCGGTGTATCCTTGCTCTATCTCATAATCGGAAAAACTCCTTTCTCTGGAGATCCTGAACAGAACATAAAGGATATAGCTAAACTGAGAGGCAGTGAGGATCTATGGGAGATTGCTAAGCTACACAATCGGGAATCCTCATTCCCTGCGGACTTGTATGGTAAACAAGGCTTGGCACCTTTGCGATTTCAAGTTTGGTTAGAGAAAAGAATCAAACTTGAGAAAGGAGAGATCCAGGAAGTCCCTCACGATTTAAGATTACTGCCTGATCTCTTGAACAAGTGTTTGATAGTGAACCCTAGACTGAGAATCGGTGCAGAGGAGGCCCTTGAGCATAAGTTTTTTGCTCCATGCCATGAGAAGAAAGAAAGGCAGTGCAAGTGGAAAAATATCGGGCCTGACCCAAAA 1191 0.4475 MGCIFCKARHFGAMGQQNINGGRARMDKGQKKEKKVPSILTHLVDQKERKDLPTFESYIVEEEVCKGANGVVYKAKSKKDGATVAIKCTPLKQGPAAEAHEQRLDKEWKVLKQFRGKKNSIINYEDSFKKGNTHYFVLEYIMHDEPKVLKEKIKTDQLRRYGYCMFRALAALHKGGVIHGDVKPGNFLFSRKRNEGYLTGFNHARFPDKNPVDGSPMPSKQPIANDAAGPGKGPWVGTGGFRAPEVLFRSPHQGPKLDIWSAGVSLLYLIIGKTPFSGDPEQNIKDIAKLRGSEDLWEIAKLHNRESSFPADLYGKQGLAPLRFQVWLEKRIKLEKGEIQEVPHDLRLLPDLLNKCLIVNPRLRIGAEEALEHKFFAPCHEKKERQCKWKNIGPDPK 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5438g00001 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Pral5438g00001 397 SUPERFAMILY Protein kinase-like (PK-like) 54 386 IPR011009 -
Pral5438g00001 397 FunFam Kinase like protein 141 208 - -
Pral5438g00001 397 ProSiteProfiles Protein kinase domain profile. 58 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5438g00001 397 Gene3D Transferase(Phosphotransferase) domain 1 144 393 - -
Pral5438g00001 397 Pfam Protein kinase domain 59 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5438g00001 397 Gene3D Phosphorylase Kinase; domain 1 16 141 - -
Pral5438g00001 397 SMART serkin_6 58 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5438g00001 397 PANTHER OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED 52 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5438g00001 Pral-Chr5438 22755 46791 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5438g00001 62 376 Core Cell Cycle Gene Families AT3G48750 29.091 5.03e-24 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Pral5438g00001 Pkinase 8.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5438g00001 K02214 - pcin:129310665 234.572