Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5437g00001 ATGGATCAACAGAAGCTTATGGATTTTCTAGCATCTAAATCGTACGAGGAAATAAAGGAAGTAAGCAAAGGTGCTCATGGCACTGTTTACAAGGCAAAGAGGAAGAATAGTGGAGGTGGAGCCACCAGGGTTGCCCTTAAATGTATCCCATTAAAACAAGGTCCTGCTGCTGAAGCTCACGAGCAACGTCAACGTCTTGCTAAGGAGTGGGAAGTGCTGGAGCAACATGGAGGCAAAAACTATATCATTAACTATAAAGACAGATTCAAGAATGGAAATACTCATTGCTTTGTTCTCCAATATATCGAGCACGACAAGCCTGAGGTGTTAAAGGAGGAAATTAGTATTGATCAGCTCCGACGGTATGGTTACTGCATGTTCCGGGCTCTTGCAGCTCTTCACGAGGGGGGAGTGATACACACAGATGTTAAACCTGGGAGTTTCCTTTTCTCCCGTAAGCTTAAAAAAGGGTATCTGACTGATTTCTATCATGCCAGGTTTCCGGATGAGAACCCTGTCGACGGCTCTCCCATGCCTTCAAAACAACCAATTGCCAATGATGCCGCTGGTCCTGGAGAGCAGATAAGAAAAGGTCCTTGGGTGGGAACAAGGGGCTATCGGGCTCCAGAGGTATTGTTCAGGTCTCCACATCAAGGTCCTAAGCTTGACATCTGGTCTGCCGGCGTATCCTTGCTCTATCTCATAATGGGAAAAACTCCTTTCACTGGAGACCCTGAACAGAGCATAAAGGATATAGCTCAACTGAGAGGCAGTGAGGATCTATGGGAGCTTGCTAAGCTACACAATCGGGAATCCTCATTCCCTGCGGACTTATATGGTAAACAAGGTTTGTCACCTTTGCGATTTCAAGTTTGGTTCGAAAAAAGAATGAAAATTGAGAAACGAGGGTTCCTGGAAGTCTCTCGAGGGTTCCTGGAAGTCTCTCGCGATTTAAGATTACTGCTTGATCTCTTGGACAAGTGCTTGATGGTGAACCCTAGACTGAGAATCGGTGCAGAGGAGGCCCTTAAGCATGAGTTTTTTGCTCCATGCCGTTAG 1059 0.4608 MDQQKLMDFLASKSYEEIKEVSKGAHGTVYKAKRKNSGGGATRVALKCIPLKQGPAAEAHEQRQRLAKEWEVLEQHGGKNYIINYKDRFKNGNTHCFVLQYIEHDKPEVLKEEISIDQLRRYGYCMFRALAALHEGGVIHTDVKPGSFLFSRKLKKGYLTDFYHARFPDENPVDGSPMPSKQPIANDAAGPGEQIRKGPWVGTRGYRAPEVLFRSPHQGPKLDIWSAGVSLLYLIMGKTPFTGDPEQSIKDIAQLRGSEDLWELAKLHNRESSFPADLYGKQGLSPLRFQVWFEKRMKIEKRGFLEVSRGFLEVSRDLRLLLDLLDKCLMVNPRLRIGAEEALKHEFFAPCR 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5437g00001 352 Pfam Protein kinase domain 15 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5437g00001 352 ProSiteProfiles Protein kinase domain profile. 15 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5437g00001 352 Gene3D Phosphorylase Kinase; domain 1 7 114 - -
Pral5437g00001 352 Gene3D Transferase(Phosphotransferase) domain 1 115 352 - -
Pral5437g00001 352 PANTHER OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED 13 350 - -
Pral5437g00001 352 SMART serkin_6 15 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5437g00001 352 SUPERFAMILY Protein kinase-like (PK-like) 9 350 IPR011009 -
Pral5437g00001 352 FunFam Kinase like protein 102 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5437g00001 Pral-Chr5437 5029 8380 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5437g00001 15 348 Core Cell Cycle Gene Families AT3G48750 26.377 6.07e-20 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Pral5437g00001 Pkinase 2.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5437g00001 K02214 - dcr:108207340 259.225