Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5436g00026 ATGTCGGTGGCGTCACCGTCTCCGGCGGCAGCCACCGCCCCCCCACCACCACCAACACCCTCGACCAATAGTAGTGCACCGCCGCCTGCCACCACTCCGCCACCACAATCGTCTTCACCCGCACCAGCAGGCAATTCCACTTCGCCGCCGCCTTCGGCACCTCCGCCATCCTCAGCACCGCCTCCGGTGACTCCGTCTGCACCTCCTCCCACTGTCCGGTCGCCCCCGCCAGCACAGTCACCGCCACCTCAGGCATCGACACCCCCTCCGTCTGTCACTCCACCGCCATTGTCTCCTCCTCCACAATCTGTTGCCCCTGCGTCACGACCACCACCTCCGCCTAATGCTACGCCGCCTACTTCTCCTGTACGTTCCCCCTCACCACCACCACAGTCAACGTCTCCACCGGTGAGTTCTCCTCCGCCAGCAAATTCATCCCAATCACCGCCATCTAACCCATCTCCGGTGCCTTCGCCGTCTGCGCCTTCGGCAAATCCGCCAAGAAACTCACCTCCACCCCCGACACCATCGTCAGACCCTCCCCAAAACTCGCCCACGCCTCCTCCACCATCGTCCAACCCTCCGGTAAACTCATCTCGACCACCGACAGCAAGCCCCCCGGGGAATTCATCTTCACCGCCATCATCTGTGCCACCACCGAGTATTTCACCACCTCCGCCGGTGGCTGTGCCACCGCGAGGGTCATCTACACCACCAGCATCAGCACCGCCTGTAAATTTGCCCGCCCCTGAGGCGCCTCAGATGAGTACACCCACTTCTCAACCAAGTCCATCTCCTCCAAATTCCACCCCCAACTCATCTCCGCCGCCACCCATAATTCGGATGGCTCCACCTCCGTCCTCACTTTTGTCACCACCAGCTTCTCAAAATTCCTCCCCACCATCAGAAAGCGGAACAGAAAGTTCAAGCGCCGGTAAAAATGAGGGCATCAGTACGGGCGTTGCAGTGGCTATTGGTGTGGCAGGGGGGATTATAGCGCTTACCTTAATTGGAATGCTTATCTGGTGCCTGATAAGGAGGCAAAAGAAACGGGGGCCTGAGAGTGGTGGTTATGTCATGCCATCCACTTCTGGTTCATTACCCGAGTCAGATTCATCCTTTTTTAAGACACACTCTTCAGCTCCTTTTGTACAAAGTGGTTCCGGTAGTGACTCTGTATACACACCATCTGAGCCGGGTGGACTAGGCAACTCAAGGACATGGTTTACATACGAAGAACTAATCAAAGCTACAAATAATTTTGCGCCTCAAAATCTTTTGGGTGAGGGTGGATTTGGTTCTGTATACAAAGGATGCCTACCAGATGGGAGAGAGGTAGCAGTCAAACAGCTGAAAGCCGGGGGAGGTCAGGGTGAAAGGGAATTCAAAGCTGAAGTGGAGATTATTAGTCGCATTCATCATCGCCATTTAGTCTCTTTGGTGGGATACTGCATTTTAGACAGCAGAAGGCTCCTCGTCTATGATTATGTCCCCAACAAAACCCTATATCATCATCTTCATGGGGAAGGTATGCCGGTGTTGAGCTGGGAAAGACGTGTGAAGATTGCTGCTGGTGCAGCTCGAGGAATTGCTTACCTTCATGAAGATTGTAATCCTCGGATCATTCACAGGGATATCAAGTCCTCAAACATTCTTTTAGATTACAACTTTGATGCTCAAGTCTCAGATTTTGGCCTAGCCAAATTAACTCTTGATACAGTTTCACACATAAGCACTCGTGTCATGGGAACATTTGGATATGTTGCACCTGAATATGCATCAAGTGGCAGATTGAGTGAGAAATCTGACGTATTCTCTTTTGGGGTTGTCCTTCTGGAGCTCATTACCGGACGAAAGCCTGTAGATGCATCTCAACCCTTGGGGGATGAGAGCCTAGTTGAATGGGCTCGACCTCTGCTGAGTCATGCAATTGATAATGAAGAATTTGAAGGTTTAACAGATCCTCGGCTTGAAAAAAACTATGTTGAAAGTGAGATGTTTCGCATGATTGAAATTGCTGCAACTTGTGTGCGACATTCGGCTGCCAAGAGACCTCGAATGGGACAGGTTGTTAGAGCTTTTGATAGCTTAATAAATTCAGATTTGAACAACGGGATGAGGCCAGGGGAAAGCGAAGCATTTAACTCTGCACAGCAATCTGCAGAAATAAGAATGTTTCGGAGGATGGCATTTGGCAGCCAAGATTACAGCACAGACTTTTTTAGTCAGACAAGTTTGAATTCAACATAG 2250 0.5151 MSVASPSPAAATAPPPPPTPSTNSSAPPPATTPPPQSSSPAPAGNSTSPPPSAPPPSSAPPPVTPSAPPPTVRSPPPAQSPPPQASTPPPSVTPPPLSPPPQSVAPASRPPPPPNATPPTSPVRSPSPPPQSTSPPVSSPPPANSSQSPPSNPSPVPSPSAPSANPPRNSPPPPTPSSDPPQNSPTPPPPSSNPPVNSSRPPTASPPGNSSSPPSSVPPPSISPPPPVAVPPRGSSTPPASAPPVNLPAPEAPQMSTPTSQPSPSPPNSTPNSSPPPPIIRMAPPPSSLLSPPASQNSSPPSESGTESSSAGKNEGISTGVAVAIGVAGGIIALTLIGMLIWCLIRRQKKRGPESGGYVMPSTSGSLPESDSSFFKTHSSAPFVQSGSGSDSVYTPSEPGGLGNSRTWFTYEELIKATNNFAPQNLLGEGGFGSVYKGCLPDGREVAVKQLKAGGGQGEREFKAEVEIISRIHHRHLVSLVGYCILDSRRLLVYDYVPNKTLYHHLHGEGMPVLSWERRVKIAAGAARGIAYLHEDCNPRIIHRDIKSSNILLDYNFDAQVSDFGLAKLTLDTVSHISTRVMGTFGYVAPEYASSGRLSEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLSHAIDNEEFEGLTDPRLEKNYVESEMFRMIEIAATCVRHSAAKRPRMGQVVRAFDSLINSDLNNGMRPGESEAFNSAQQSAEIRMFRRMAFGSQDYSTDFFSQTSLNST 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5436g00026 749 CDD TM_EGFR-like 318 351 - -
Pral5436g00026 749 Gene3D Phosphorylase Kinase; domain 1 398 496 - -
Pral5436g00026 749 SMART serkin_6 421 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5436g00026 749 MobiDBLite consensus disorder prediction 352 372 - -
Pral5436g00026 749 FunFam proline-rich receptor-like protein kinase PERK8 497 708 - -
Pral5436g00026 749 MobiDBLite consensus disorder prediction 9 291 - -
Pral5436g00026 749 ProSitePatterns Serine/Threonine protein kinases active-site signature. 541 553 IPR008271 GO:0004672|GO:0006468
Pral5436g00026 749 FunFam Proline-rich receptor-like protein kinase PERK8 393 496 - -
Pral5436g00026 749 Gene3D Transferase(Phosphotransferase) domain 1 497 715 - -
Pral5436g00026 749 PRINTS Proline rich extensin signature 56 81 - -
Pral5436g00026 749 PRINTS Proline rich extensin signature 27 43 - -
Pral5436g00026 749 PRINTS Proline rich extensin signature 6 27 - -
Pral5436g00026 749 ProSiteProfiles Protein kinase domain profile. 421 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5436g00026 749 ProSitePatterns Protein kinases ATP-binding region signature. 427 449 IPR017441 GO:0005524
Pral5436g00026 749 Pfam Protein tyrosine and serine/threonine kinase 425 693 IPR001245 GO:0004672|GO:0006468
Pral5436g00026 749 MobiDBLite consensus disorder prediction 292 313 - -
Pral5436g00026 749 CDD STKc_IRAK 427 697 - -
Pral5436g00026 749 MobiDBLite consensus disorder prediction 1 313 - -
Pral5436g00026 749 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 328 729 IPR047117 -
Pral5436g00026 749 SUPERFAMILY Protein kinase-like (PK-like) 399 692 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5436g00026 Pral-Chr5436 321048 326342 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5436g00026 321 636 Trihelix Transcription Factor Family AT1G26150 70.032 1.83e-159 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pral5436g00026 PK_Tyr_Ser-Thr 2.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5436g00026 - - gmx:100794393 712.99