Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5436g00023 ATGAAGGGTGGAAAAAGAAGGAAGCTGCATTTCAGCAAGATCTACTCATTCGCATGCGGGAGACAATCATTTGAGGAAGACCATTCACAGATTGGGGGACGAGGTTATTCCAGGGTGGTTTTCTGCAACGAACCAGACATCCTTGAGGCTGAAAATCGGGATTATGCTGATAACTCTGTGAGGTCTACAAAATATACTCTTGCTACTTTCTTGCCTAAATCACTGTTTGAGCAGTTCAGGAGGGTGGCTAATTTCTATTTCTTAGTTACCGGAACCTTAGCCTTCACCCCTCTTGCTCCCTACATAGCTGTTAGTGCTATCGTTCCTCTGATCATCGTTGTTGGGGCATCCATGATCAAAGAAGGCATTGAAGATTGGCGGCGGAAGAAGCAGGATATTGAGGTGAACAATAGACTGGTTAAAGTGCATAAAGGTGATGGTGTATTTGAATTTACTGCATGGAAGAATCTGAGGGTGGGAGATATAGTGAAGGTAGTGAAGGATGAATTTTTTCCAGCAGACCTACTATTGCTTTCATCCAGTTATGAGGATGCCGTCTGCTATGTTGAGACCATGAATTTGGACGGGGAGACAAATTTAAAGCTGAAACAGGGGTTGGAGGTAACTTCTTCCATGCATGACGATCTCTACTTCTGTGACTTTAAAGCTACAGTTAAATGTGAAGACCCAAATGCCAACTTATACTCTTTTGTGGGGAGCACTGAGTTTGAAGGGAAACAATATCCCCTTTCTCATCGGCAACTTCTCCTGAGAGATTCTAAACTCCGTAATACAGACTTTATATTTGGAGCTGCCATTTTCACTGGTCATGACACCAAGGTTATTCAAAATTCTACTGACCCCCCTTCAAAGAGAAGCAAGGTTGAGAGGAAGATGGATAAAATAATCTATTTCTTGTTTTGTATTCTTTTTCTAATGGCATCTGTTGGATCTGTTTTCTTTGGAATTGCAACTAAAGATGACTTGGAAAATGGGTTGATGAAAAGATGGTACCTCAGACCAGATGATTCTACGATTTTCTTTGATCCAAAAAGATCACCATCTGCTGCACTTTTTCATTGTTTGACAGCCTTAATGTTGTATGGCTTCTTTATTCCAATCTCCCTGTATGTGTCAATAGAAATTGTTAAAGTCCTTCAGAGCATCTTCATCAATCAAGATATCCATATGTACTATGAGGAAGCTGACAAACCAGCACGTGCCCGTACTTCAAATTTGAATGAAGAACTTGGCCAAGTTGATACAATACTTTCTGATAAAACTGGAACTTTGACCTGCAACTCAATGGAGTTCATCAAATGTTCTATTGCTGGGGTACCTTATGGTCGTGGTGTTACAGAGGTGGAAAAAGCTATGAATAAAAGAAGTAGTTCACCACTGATTCATGAGCAAGATAGTGGATCAGATGACGTCAGGGATTCTACTGTTACAAAAGCCCCCATCAAAGGTTTTAATTTTACAGATGAAAGGATAATGAATGGAAACTGGGTTAATGAGCCTCATGCGGAGGTTATCCAGAAGTTTTTTCGCTTATTAGCAACCTGTCATACAGCCATCCCTGAAGTGGATGAAGACACTGGAAATATCTCATATGAAGCTGAGTCACCAGATGAAGCAGCCTTTGTCATTGCGGCAAGAGAACTTGGCTTTGAATTCTACAAAAGAACTCAGACAAGTTTATCAATGTATGAGTTGGATCCTGTTTCTGGCCAAAAAGTCGAAAGGATGTATAAGCTCCTCAATGTTTTAGAATTCAACAGCTTGAGGAAGCGAATGTCAGTGATAGTGAAAGATGAAGAGGGCAAAATTTTTCTATTCTGTAAAGGGGCTGACAGTGTTATGCTTGAAAGGCTTGCCAAGAATGGGCGGGAGTTTGAAGAGAAAACCCTCGAACATGTGCAAGAGTATGCTGATGCAGGTCTAAGGACCTTGATATTGGCCTATTGTGAGCTTGATGAAGAAGCATACAGGGAGTTTGATGAAAAATTTTCTCTAGCCAAGAATTCAGTTCATGCAGATCGGGAAACACTGATTGATGAAGTATCAGATAAGATTGAGAGGAATCTAATCCTTCTTGGTGCCACTGCTGTAGAGGACAAACTCCAAAATGGGGTTCCTGATTGTGTGGACAAGCTTGCTCAGGCAGGAATCAAGATTTGGGTTCTGACTGGGGATAAAATGGAGACTGCTATCAATATTGGTTATGCTTGTAGTTTGCTTAGACAAGGAATGAAGCAGATTATAATTCATCTGGATTCTCCAGATATTCAAGCATTAGAAAAGGCTGGAGAAAAGATTGCTATTGCCAAGGCATCAAGGGAAAATATCCAACGTCAGATATCTGAAGCTACTGCACAACTTTCTGTTTCCAGAGGGACTTGTCAGCAAGCATTTGCTCTGATCATTGACGGAAAATCACTTGCGTATGCTCTTGAGGATGACATGAAGAACATATTTCTGGAGCTTGCACTTAATTGCGCATCAGTTATCTGCTGTCGGTCGTCACCAAAGCAGAAAGCACTAGTTACCAGACTTGTTAAATCTGGAACTGGCAAAACAACGCTAGCCATTGGTGATGGAGCCAATGATGTGGGAATGCTTCAAGAAGCAGATATAGGGATTGGAATTAGCGGTGTTGAAGGAATGCAGGCTGTTATGTCTAGCGATATTGCAATTGCCCAGTTCAGGTACTTGGAACGGTTACTTCTCGTGCATGGGCATTGGTGTTACCGGAGGATCTCATCAATGATATGCTATTTTTTCTACAAGAACGTCACTTTTGGATTCACTCTCTTCCTGTATGAAGTGTATGCATCATTCTCTGGAACACCTGCATACAATGACTGGTTTTTGTCTCTCTACAATGTCTTCTTCTCATCTCTTCCTGTTATTGCTCTTGGCGTATTTGACCAGGACGTTTCTGCCCGGTATTGTCTCAAGTTTCCTCAGTTATATCAACAAGGAGTGCAGAATGTCCTCTTTAGCTGGCGCCGTATACTTAGCTGGATGCTGAATGGATTCACAAGTGCAATCATAATTTTCTTCTTCTGCACAAAGGCGATGGAGCTTCAGGCCTTTGATGAGGAGGGAAGAACAGCCGGGAGGGATATACTGGGAGCAACCATGTATACCTGCGTTGTATGGGTGGTAAACTTGCAGATGGCACTTGCCATAAGTTACTTCACCTTGATTCAACATATTTTCATCTGGGGTACCATTGCTTTCTGGTATCTTTTCCTCCTGATATATGGGGCGATGCCTCCGGGATTTTCCAAGAATGCCTACTATGTGTTCATTGAAACGCTGGCCCCATCTCCCATGTTTTGGCTTGTGACCTACTTCGTGGTGATCTCAACCTTAATACCTTACTTCTCTTACTCAGCACTCCAAATGAGGTTCTTTCCTATGTACCATGAAGCGATACAATGGTTAAGGTATGAGGGGAAGGCGAATGATCCAGAATATTGCGCCTTGGTGAGACAGAGATCATTGGGGCGAGTAACTGTCGGTTCAACAGCGCGCTTAGAAGCTAAGAAGGCTAACCACAATAAAAACAGAACTTCTAACCTTAAATGA 3597 0.4201 MKGGKRRKLHFSKIYSFACGRQSFEEDHSQIGGRGYSRVVFCNEPDILEAENRDYADNSVRSTKYTLATFLPKSLFEQFRRVANFYFLVTGTLAFTPLAPYIAVSAIVPLIIVVGASMIKEGIEDWRRKKQDIEVNNRLVKVHKGDGVFEFTAWKNLRVGDIVKVVKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLEVTSSMHDDLYFCDFKATVKCEDPNANLYSFVGSTEFEGKQYPLSHRQLLLRDSKLRNTDFIFGAAIFTGHDTKVIQNSTDPPSKRSKVERKMDKIIYFLFCILFLMASVGSVFFGIATKDDLENGLMKRWYLRPDDSTIFFDPKRSPSAALFHCLTALMLYGFFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVPYGRGVTEVEKAMNKRSSSPLIHEQDSGSDDVRDSTVTKAPIKGFNFTDERIMNGNWVNEPHAEVIQKFFRLLATCHTAIPEVDEDTGNISYEAESPDEAAFVIAARELGFEFYKRTQTSLSMYELDPVSGQKVERMYKLLNVLEFNSLRKRMSVIVKDEEGKIFLFCKGADSVMLERLAKNGREFEEKTLEHVQEYADAGLRTLILAYCELDEEAYREFDEKFSLAKNSVHADRETLIDEVSDKIERNLILLGATAVEDKLQNGVPDCVDKLAQAGIKIWVLTGDKMETAINIGYACSLLRQGMKQIIIHLDSPDIQALEKAGEKIAIAKASRENIQRQISEATAQLSVSRGTCQQAFALIIDGKSLAYALEDDMKNIFLELALNCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNVTFGFTLFLYEVYASFSGTPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSARYCLKFPQLYQQGVQNVLFSWRRILSWMLNGFTSAIIIFFFCTKAMELQAFDEEGRTAGRDILGATMYTCVVWVVNLQMALAISYFTLIQHIFIWGTIAFWYLFLLIYGAMPPGFSKNAYYVFIETLAPSPMFWLVTYFVVISTLIPYFSYSALQMRFFPMYHEAIQWLRYEGKANDPEYCALVRQRSLGRVTVGSTARLEAKKANHNKNRTSNLK 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5436g00023 1198 NCBIfam HAD-IC family P-type ATPase 836 947 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5436g00023 1198 Pfam Phospholipid-translocating P-type ATPase C-terminal 892 1142 IPR032630 -
Pral5436g00023 1198 SFLD Haloacid Dehalogenase 408 915 - -
Pral5436g00023 1198 FunFam Phospholipid-transporting ATPase 699 904 - -
Pral5436g00023 1198 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 34 1154 - -
Pral5436g00023 1198 MobiDBLite consensus disorder prediction 460 481 - -
Pral5436g00023 1198 Gene3D - 699 904 IPR023214 -
Pral5436g00023 1198 Gene3D - 118 286 - -
Pral5436g00023 1198 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Pral5436g00023 1198 PRINTS P-type cation-transporting ATPase superfamily signature 864 883 - -
Pral5436g00023 1198 SUPERFAMILY Calcium ATPase, transduction domain A 140 283 IPR008250 -
Pral5436g00023 1198 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 1142 IPR023298 -
Pral5436g00023 1198 SFLD p-type atpase 408 915 IPR044492 -
Pral5436g00023 1198 Coils Coil 766 793 - -
Pral5436g00023 1198 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 489 700 IPR023299 GO:0000166
Pral5436g00023 1198 FunFam Phospholipid-transporting ATPase 116 286 - -
Pral5436g00023 1198 CDD P-type_ATPase_APLT_Dnf-like 57 1024 - -
Pral5436g00023 1198 SUPERFAMILY HAD-like 412 908 IPR036412 -
Pral5436g00023 1198 Gene3D - 543 698 IPR023299 GO:0000166
Pral5436g00023 1198 Pfam Phospholipid-translocating ATPase N-terminal 41 104 IPR032631 -
Pral5436g00023 1198 Pfam Cation transport ATPase (P-type) 538 625 - -
Pral5436g00023 1198 FunFam Phospholipid-transporting ATPase 541 699 - -
Pral5436g00023 1198 NCBIfam phospholipid-translocating P-type ATPase 55 1149 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pral5436g00023 1198 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5436g00023 Pral-Chr5436 303257 311734 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5436g00023 1 1186 Primary Pumps ATPases AT1G68710 74.323 0.0 1908
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5436g00023 K01530 - gmx:100785037 2026.14