Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5436g00016 ATGCCATCTCAGATCTTGCCCATTACAAATCGACCTTCGTACTCTTCGTCTGCTTCCGCTGCCGCAATGTTAATTAAAACCGCGGATGATGACCCATCTACGAGTCTTCTCGTTTCTTCTCGATTTGAAGACGACAGTGTTGCAGCCATTAAGCCCCTTCTCTCTCGCTCTCCCAGCTTATCTTCTACTTCCAGTAATTCGATGGGCGGTAATGCAAACATTCACCAGAAACGGCGTCGCCGTTCCGCAAGTGAGAACTCCTTGTCGTCTTCCTCCAGCGGCGATAGTCGCCGATCTTCGCTGGGCCAGGATGTTAGCCATGTTGCTTCGGAGACCTTTTTAGTCACTCGCCTGGGTTTGAAGTTGTTACGATATCTTGGGGTAGGCTATAGATGGATTACAAGATTTCTTGCTCTTGGTTGTTATTCAATGCTGCTTTTCCCAGGCTTTGTTCAAGTTGGATTTTACTATTTCTTCTCCAGACATGTACGCAGAAGTATAGTCTATGGAGATAAACCACGGAATAGACTTGACTTGTATTTACCCAAAAATAATGATGGTCCAAAGCCAGTTGTTGCCTTTATTACTGGTGGAGCCTGGATTATTGGTTACAAAGCATGGGGATCTCTTTTAGGCCAACAGTTGTCAGAGAGGGATATCATGGTGGCATGCATAGATTACAGAAATTTTCCTCAGGGAACCATGAGTGATATGATAGAGGATGCTTCTCAAGGTATCTCATTTGTATGCAACAACATTGCAGAATATGGAGGTGATCCTAACAAGATTTTCCTAATGGGGCAGTCAGCGGGCGCACATATTGCTGCTTGTGCTCTTGTGGAGCAGGCAATCAAAGAGGCTGGTGAAGGAGAGAGTACCACTTGGAGCGTCTCCCAGATCAAGGCTTATTTTGGTTTATCTGGAGGGTACAATTTGCTTAGCCTAGTAGATTATTTCCACAGTAGAGGTCTTTATCGTTCCATCTTTCTAAGCATAATGGAAGGGGAGGAATCCCTGAGGCAGTTTTCTCCTGAATTAAGGATCCAAGAGCCAAACGTTGCAAATGCTGCTTCTCTCCTGCCTCCTATAGTTCTTTTTCATGGTACTGGGGATTATTCCATACCATCAGATGCCAGCACATCCTTTGCCGAAACTCTTCAAAGACTTGGAGTTAAAGCTGAAGCAGTTTTATATGAAGGAAAAACTCATACCGACTTGTTTCTTCAGGATCCAATGAGAGGGGGTGAAGATGACATGTTTAGGGATTTAGTGGGGTATATCCATGCTGATGATGCAGAGGCACGTGCCAGAGATGAAGCAGCTCCTCCAAGGAGACGCCTTGTCCCAGAATGCATGATCCAGTTGGCTCGTAGAGTTAGTCCTTTCTAA 1389 0.4521 MPSQILPITNRPSYSSSASAAAMLIKTADDDPSTSLLVSSRFEDDSVAAIKPLLSRSPSLSSTSSNSMGGNANIHQKRRRRSASENSLSSSSSGDSRRSSLGQDVSHVASETFLVTRLGLKLLRYLGVGYRWITRFLALGCYSMLLFPGFVQVGFYYFFSRHVRRSIVYGDKPRNRLDLYLPKNNDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIMVACIDYRNFPQGTMSDMIEDASQGISFVCNNIAEYGGDPNKIFLMGQSAGAHIAACALVEQAIKEAGEGESTTWSVSQIKAYFGLSGGYNLLSLVDYFHSRGLYRSIFLSIMEGEESLRQFSPELRIQEPNVANAASLLPPIVLFHGTGDYSIPSDASTSFAETLQRLGVKAEAVLYEGKTHTDLFLQDPMRGGEDDMFRDLVGYIHADDAEARARDEAAPPRRRLVPECMIQLARRVSPF 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5436g00016 462 MobiDBLite consensus disorder prediction 57 73 - -
Pral5436g00016 462 MobiDBLite consensus disorder prediction 57 103 - -
Pral5436g00016 462 Pfam BD-FAE 177 386 - -
Pral5436g00016 462 MobiDBLite consensus disorder prediction 85 103 - -
Pral5436g00016 462 SUPERFAMILY alpha/beta-Hydrolases 141 416 IPR029058 -
Pral5436g00016 462 Gene3D alpha/beta hydrolase 159 412 IPR029058 -
Pral5436g00016 462 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 78 413 - -
Pral5436g00016 462 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 159 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5436g00016 Pral-Chr5436 233799 240207 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5436g00016 1 462 Carbohydrate Esterase AT1G26120 68.257 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5436g00016 K15889 - tcc:18610569 661.759