Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5436g00015 ATGGCTGGGTTGGAGGAATTGAGGAAAAAACTCGCACCTTTATTTGATGCGGAGAAGGGCTTTTCGACAGGTTCTACTTTGGACCCTTGTGATTCGTACACATTATCAGATGGTGGAACTGTTAACTTATTGAGCAAATCATATGGGGTGTACAATATCAACGAGCTTGGACTGCAAAAATGCACATCTCGATCTATAGATGAAACTGATCACAGTGAAAAAACATATAGATGTGCTTCCCATGAGATGAGAATATTTGGAGCAATTGGTAGTGGTGCCAGCAGTATTGTGCAGAGAGCTATACATATACCAACACATAGAATTATAGCGTTGAAGAAAATCAATATCTTTGAGAAGGAGAAAAGGCAGCAACTTCTTACTGAAATAAGGACATTATGTGAAGCACCTTGTTACCAAGGTCTTGTTGAATTCCATGGGGCATTCTACACTCCAGACTCTGGACAGATAAGCATAGCTTTGGAGTACATGGATGGAGGATCCCTAGCAGATATCCTAGCAGTGCATGGAAAAATACCTGAATCTATTCTTTCAGCCATGTTTCAGAAGCTCCTGCATGGGTTAAGCTATCTGCATGGAGTCAGACATTTAGTACACAGAGACATAAAACCAGCCAATTTACTTGTAAATCAAGGGGAACCAAAAATTACTGATTTTGGTATCAGTGCTGGCTTAGAGAATTCAGTGGCAATGTGTGCTACTTTTGTTGGAACTGTTACATACATGTCACCTGAGCGAATTCGAAATGATAGCTATTCTTTTCCTGCTGATATATGGAGCCTTGGTCTTGCGCTGCTTGAGTGTGGAACTGGAGAATTCCCATATACAGCTAATGAAGGTCCTGTAAATCTTATGTTGCAGATTCTAGATGATCCATCACCATCACCGTCAAATCACAAGTTTTCACCTGAATTCAACTCATTTGTTGGTGCTTGCTTGCAGAAGGACCCAGATGCCAGGCCAACAGCAGATGAGTTGCTTCGGCACCCCTTTATCACAAAGTATGAGAATGCCAACGTAGATTTAGCAGGATTTGTACGAAGTGTCTTTGATCCAACACAACGAATGAAGGACTTGGCTGATATGTTCACGATTCATTATTACTTACTGTTTGATGGACCCGATGATCTCTGGCTTCATACTAGGAGCTTATACAATGAAGGTTCAATTTTCAGTTTCTCTGGGAAGCAATACGTTGGTCCAAACAATATTTTTGCAAAACTGTCGAGTATCCGAAGTACATTAGTTGGTGACTGGCCTCCTGACAAGCTGGTGCATGTCGTTGAAAAGCTTCAATGCCGTGCCCACGGTGAGGATGGAGTTGCAATTAGGGTATCAGGATCCTTTATTATTGGTAATCAATTCCTGATATGTGGAGATGGCATTCAAGTAGAGGGGTTGCCAAGCTTTAAGGATCTTGGAATTGATGTTTCTAGCAGGCGAATGGGTACATTTCATGAACAGTTTATCATAACACCCACCAATCTCATTGGATGCTACTCCATAGCTAACCAAGAGTTGTACATAAACCAATAG 1554 0.4138 MAGLEELRKKLAPLFDAEKGFSTGSTLDPCDSYTLSDGGTVNLLSKSYGVYNINELGLQKCTSRSIDETDHSEKTYRCASHEMRIFGAIGSGASSIVQRAIHIPTHRIIALKKINIFEKEKRQQLLTEIRTLCEAPCYQGLVEFHGAFYTPDSGQISIALEYMDGGSLADILAVHGKIPESILSAMFQKLLHGLSYLHGVRHLVHRDIKPANLLVNLXGEPKITDFGISAGLENSVAMCATFVGTVTYMSPERIRNDSYSFPADIWSLGLALLECGTGEFPYTANEGPVNLMLQILDDPSPSPSNHKFSPEFNSFVGACLQKDPDARPTADELLRHPFITKYENANVDLAGFVRSVFDPTQRMKDLADMFTIHYYLLFDGPDDLWLHTRSLYNEGSIFSFSGKQYVGPNNIFAKLSSIRSTLVGDWPPDKLVHVVEKLQCRAHGEDGVAIRVSGSFIIGNQFLICGDGIQVEGLPSFKDLGIDVSSRRMGTFHEQFIITPTNLIGCYSIANQELYINQ 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5436g00015 518 Gene3D - 365 517 - -
Pral5436g00015 518 FunFam mitogen-activated protein kinase kinase 3 165 361 - -
Pral5436g00015 518 ProSiteProfiles Nuclear transport factor 2 domain profile. 366 516 IPR018222 -
Pral5436g00015 518 ProSiteProfiles Protein kinase domain profile. 83 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5436g00015 518 Gene3D Phosphorylase Kinase; domain 1 53 164 - -
Pral5436g00015 518 FunFam Mitogen-activated protein kinase kinase 3 363 517 - -
Pral5436g00015 518 SUPERFAMILY Protein kinase-like (PK-like) 85 361 IPR011009 -
Pral5436g00015 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Pral5436g00015 518 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Pral5436g00015 518 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 29 389 - -
Pral5436g00015 518 SUPERFAMILY NTF2-like 364 516 IPR032710 -
Pral5436g00015 518 SMART serkin_6 83 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5436g00015 518 CDD PKc_MAPKK_plant_like 84 344 - -
Pral5436g00015 518 FunFam mitogen-activated protein kinase kinase 3 56 164 - -
Pral5436g00015 518 Gene3D Transferase(Phosphotransferase) domain 1 165 364 - -
Pral5436g00015 518 Pfam Protein kinase domain 87 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5436g00015 Pral-Chr5436 225594 230984 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5436g00015 30 517 MAP Kinase Kinase Gene Family AT5G40440 77.869 0.0 803
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Pral5436g00015 Pkinase 7.3e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5436g00015 K20607 - gmx:100784935 951.814