Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5436g00014 ATGATGCCCCCTCATGAGCAAGAAACTAGCACAGTTGCTACTGTCATGCCCAACATGCAGATGCAGACGGTCGTGAACCGGCCGGAGGACAGTTCGGTTCATGCCGAGCCACAAGGTTCGGTCAGTCACGGCGGAGAAACTGGTCTGGATGTCTCCGTCCATGATCACCACCCAACAATTCCAAGAGTCTCAGCTCTGCACCAATCCATGCGTCCCGTTACCCTCAAATTTGAAGACTTCTCTTACAGTGTAACGATCGAAAGCAAGAAGAATGCTTGTCCCTGTGTTTCTTCTCAGAAGACGAAGCCGACAAGGACGATACTCAACGGCGTGACGGGGATTGTCCGGCCGGGAGAGCTTATGGCAATGCTGGGTCCGTCCGGCAGCGGGAAGACCACGCTGCTCACTGCCCTCGCCGGCAGGCTCTCCGGGAAAGTCTCCAGCTCTATAACATACAATGGCCAACCATTCTCTAGCTCCATGAAGCGAAGAACCGGGTTCGTCACACAAGACGACGTTCTCTATCCTCACCTCACCGTCCTTGAGACCCTCACTTTTGCTGCTTTGCTGCGACTTCCCAAGAGTCTCACTAGAAAGGAGAAAATGGAGCAGGCTGAGACCGTCATGGAGGAGCTCGGCCTAACGAGGTGCCGTAACAGCCCCATCGGCGGCGGAGCCAGCTTGGCTCGGGGCATTTCCGGCGGAGAACGAAAGCGGGTCAGTATTGGGCAGGAGATGCTGGTGAACCCGAGCCTACTGTTGCTGGACGAGCCGACCTCAGGGCTTGACTCAACGACAGCCCAACGCATCGTCGTGTTGCTCCGGGGGCTGGCGCGCGGTGGCCGGACGGTGGTGACGACGATTCATTACAATATAAAATTTCATCCTACAAGAAGATTTTATATCAGCAAAAGTAATGGAGACCTGGCTGCTCTCACATCAGGAACGCGAAGAAGTTCAGAGAATCAATGGAACACGAGCTGGTGGGAGCAGTTCAGGGTGCTTCTGAAGAGAGGTTTAAAAGAGAGGAGGCATGAATCTTATTCAGGCTTAAGGATTTTCCAAGTGCTGTCTGTGGCTTTTCTCTCTGGACTTCTTTGGTGGCATTCTGATCCCTCAAACATACAAGATCAGGTGGGCCTGCTCTTCTTCTTCTCAATCTTCTGGGGATTCTTCCCTCTGTTTAATGCAATATTAGCATTCCCTTTGGAGAGACCCATGCTATCAAAAGAGAGATCATCAGGAATGTACCATCTCTCTTCTTACTACATAGCCAGAATGGTTGGAGACTTGCCAATGGAGTTAGTTCTTCCCACTATCTTCCTAACCATCACATATTGGATGGGAGGCCTCAAGCCTTCAATTCTCACATTTGTGTCAACCCTCTTGATCATCCTCTTCAATGTCCTTGTGTCCCAAGGCATAGGCCTTGCCCTTGGGGCAATCCTAATGGATGTGAAACAAGCCACAACTCTGGCTTCTGTTACCATGCTTGTGTTTTTGTTAGCTGGTGGATATTACATTCAGAAAATGCCTTCATTCATAGCTTGGCTTAAGTACTTCTCATTCAGTCACTATTGCTATGAGCTTTTGGTGGGAATTCAGTATTCAAAAGACCAAGTTTATGACTGTGGCCAAGTGCATTGTAGGGTAGTGGATTTTCCTGCCATCAAGTGCTTGGATATTGCTAATTTGTGGGGAGATGTGGCTGCATTGGCTGTTATGTTTGTTGGATACAGAATTGTGGCTTATTTAGCTTTGAGGATGAGACAGCCTGTCTGA 1782 0.4983 MMPPHEQETSTVATVMPNMQMQTVVNRPEDSSVHAEPQGSVSHGGETGLDVSVHDHHPTIPRVSALHQSMRPVTLKFEDFSYSVTIESKKNACPCVSSQKTKPTRTILNGVTGIVRPGELMAMLGPSGSGKTTLLTALAGRLSGKVSSSITYNGQPFSSSMKRRTGFVTQDDVLYPHLTVLETLTFAALLRLPKSLTRKEKMEQAETVMEELGLTRCRNSPIGGGASLARGISGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTTAQRIVVLLRGLARGGRTVVTTIHYNIKFHPTRRFYISKSNGDLAALTSGTRRSSENQWNTSWWEQFRVLLKRGLKERRHESYSGLRIFQVLSVAFLSGLLWWHSDPSNIQDQVGLLFFFSIFWGFFPLFNAILAFPLERPMLSKERSSGMYHLSSYYIARMVGDLPMELVLPTIFLTITYWMGGLKPSILTFVSTLLIILFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQKMPSFIAWLKYFSFSHYCYELLVGIQYSKDQVYDCGQGXHCRVVDFPAIKCLDIANLWGDVAALAVMFVGYRIVAYLALRMRQPV 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5436g00014 594 MobiDBLite consensus disorder prediction 1 58 - -
Pral5436g00014 594 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 44 289 - -
Pral5436g00014 594 Pfam ABC transporter 108 260 IPR003439 GO:0005524
Pral5436g00014 594 SMART AAA_5 117 306 IPR003593 GO:0016887
Pral5436g00014 594 MobiDBLite consensus disorder prediction 7 38 - -
Pral5436g00014 594 ProSitePatterns ABC transporters family signature. 232 246 IPR017871 GO:0005524|GO:0016887
Pral5436g00014 594 Pfam ABC-2 type transporter 330 536 IPR013525 GO:0016020|GO:0140359
Pral5436g00014 594 Gene3D - 96 314 IPR027417 -
Pral5436g00014 594 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 101 290 IPR027417 -
Pral5436g00014 594 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 75 331 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5436g00014 Pral-Chr5436 221757 225163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5436g00014 55 289 Calmodulin-binding Proteins AT2G36910 29.317 3.21e-14 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5436g00014 K05681 - gmx:100792991 490.73