Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5436g00009 ATGGATCTTAAGGGCACTATTCCTCCACATTTAGGGAATCTCTCATTCCTTGTTGAACTTGATCTTGGTGACAACTATTTTCATGGTCAAATACCTGAAGAGTTAGTTGAATTGCGTAGATTGAAACAATTGAATTTGAGCTACAATGATTTTCATGGGCAAGTTCCATTACAAATTGGAGCTTTATCTTTACTTGAGCAGTTACATCTTCAAAATAACAGTCTTGATGGATTCATTCCACTATCTCTATTTAATTTGTCAAGGTTGGTAGCTTTAGATTTGATTTATAATTTTATTGAAGGGACCATTCCACTTGAGGTAGGCAGACTTGAGCAGTTGCAGCTTTTACGACTTGGGCGTAACAAACTTTCAGGAGCTATACCCCAAACAATTTCCAACTTATCTTCACTTGAGTTATTAAGTTTATCTTATAACAGTTTGTCAGGAGGCATCCCCAATGAGATCGGTGATCTTTCACGACTAAAATCATTGCATCTTGGAGTGAATCAACTTACTGGTTCAATACCATCTTCATTATTTAATATTTCAACGCTGCAACATATTGCATTTGGAAGGAATCATTTATCTGTTTGGCATCAATGCACTGCAGTAGTCGAGTTACAATTAGGTGGCAACAAGTTTAACAAAGGAAAGATACCAAGTGGGATTGGAAATTTGACCAAACTCCACTCATTATCTCTTAGCGACAGCAACTTGCAAGGTGGAATTCCTTCATTTCTTTGGAACATGTCCTCCCTGAGAGAGGTTATCCTTGCATTCAATCATTTAAATGGTAATTTGTCAGAAGAAATGTGTCATCAACTTCCTTTACTAGAAGCATTCGTTGTTAATGATAATCAATTAGAGGGAAGCATTCCACAATCAATAAATAACTGCACATCTTTGCAAGAATTATATTTGGATGGCAACTCATTGACAGGTTTTGTACCCAAAGGCATAGGCAAACTTGATAAACTTGAAGTCTTAGACTTGACCCTTAATCATTTGAGAGGACCTCTTCCTTCCAATATATTCAACATTTCAACATTGACAATCTTGCGGCTTGGTGAAAATTCCTTCTCTGGCCTTCTCCCGCCATATTTAGGAGTTGGCCTTTTCAACCTAAAGATATTATTGTTGGGGCCAAATGAATTAACTGGAGAAATTCCAAGCAGCATATCTAATGCTTCTAAGCTCATTACATTAGATATGTCATGGAATAAAATTAGTGGAGCTATACCCAATGTGCTTGGAAACTTATCAAACTTGATAGAATTAGGTTTGCATTGGAATAATTTGAATGGGTTGATTCCTGGTACATTTAAGAAATTACATAGCCTTCAAGGCTTGAGCCTCAATAACAATAGATTGCAAGGGTCCATTATAAATGAACTTTGCCAACTCAAAAGTCTAAGTGAGTTGAATCTTGCCAACAACATGTTTTCAGGAGTAATTCCAAGATGCCTTAATAATACTTCCCTGAGAAAGATGAATTTTAGCTATAACAAATTGATTTCTCATATACCTTCTTCTCTTTGGAGTCTCGTGGATATCTTGGTTTTAGACCTATCCTCCAACGCATTGAATGGAACAATTCCACTTGAGATATCAAACTTGAGAGCGATTACACTATTGGACATGTCAAGAAATCAAATTTCAGGTAACATTCCTACAACCATGGGTGGCATGCAAACTTTGATAACCTTATCTCTAGCCCAAAACAAATTACAGGGGCCTATTCCTGAATCACTTGGTGGAATGATTAGTATGGAGTCTATGGATCTTTCCCACAATTATTTGTCTAGTGTTATTCCAAAGTCATTGGAATCATTAATCCGTCTTAAATACATTAATCTTTCCTACAATTTATTGCATGGAGAAATTCCAAAGGGTGGGCCCTTTCAAAATTTCACAGCCAAATCTTTTACAATGAATAGAGATCTTTGTGGGAAGTCTCAACTACAAGTCCATCCATGTAAGGAAGAAAACAAGCACATGTCAAATAAAGTGATGATGCTAATAATAAGCTCATTGCTTGTCATAATTATCATTTTGGTTGTTTCATGCTATGTCTTCCTCAAGCATAAGAGAGACCATGTCAATAAACCAAGCAACATGGATTTAACAAATGTGGACACAACAACCAAGATATCCTATTATGAGCTTCTACGAGCAACAAATAGATTTGATGAGAGTAATTTTCTTGGCTTTGGAAGTTTTGGATCAGTATACAAAGCAATTCTTTCAAATCAAGAAATAGTTGCTGTTAAAGTATTTAATTCAAACATGGAAGAGGCCCTAAGGAGTTTTGATAATGAGTGCACCGCCTTATGCAACTTACGTCATCGTAATCTCATTAAGGTTATTAGTAGTTGCTCAAATGATGATTTTGCATGTCTAATAATGGAATTCATGTCAAATGGAAGTCTTGATAAATGGTTGTACTCTCATAATTATTGTTTGGATATCCTACAAAGGTTGAATATAATGGTTGATGTGGCTACTGCATTGGAATATCTTCATCATGGTTCTTCGATTCCGGTTGTTCATTGTGACATAAAACCAAGCAATATCTTGTTAGATGAAGATATGGTGGCTCATCTTAGTGATTTTGGTATAACTAAACTATTAGATGAAGAAAAGTTGGAAACTTATACAAAAACATTGGCTACAGTTGGCTACATGGCACCAGAATACGGATCAAAAGGAGTGGTTTCCTTCAAAGGAGATGTGTATAGCTATGGTATCTTGCTAATGGAAATGTTTACGAGGAAGAAGCCAACCGATGAAATGTTTGTTGAAGGTCTATGTTTAAAAGATTGGGTTAGCAAATCAACACCACATTCAATCATCAATATTCTAGATGCCAATTTACTGCACAGAGGGAGTCCAGATATTAGCAGTATATTACCACTTATATCATCAATTTTTGAGTTGGCATTAAGTTGTTGCATTGAACCACCTGAAGCAAGAATTATGATAACTGATGTTTTGGTGTCATTGGAAAAAACAAGGTCATGTTTATGCAAAATGTTATATATGCACCACTAG 3051 0.3579 MDLKGTIPPHLGNLSFLVELDLGDNYFHGQIPEELVELRRLKQLNLSYNDFHGQVPLQIGALSLLEQLHLQNNSLDGFIPLSLFNLSRLVALDLIYNFIEGTIPLEVGRLEQLQLLRLGRNKLSGAIPQTISNLSSLELLSLSYNSLSGGIPNEIGDLSRLKSLHLGVNQLTGSIPSSLFNISTLQHIAFGRNHLSVWHQCTAVVELQLGGNKFNKGKIPSGIGNLTKLHSLSLSDSNLQGGIPSFLWNMSSLREVILAFNHLNGNLSEEMCHQLPLLEAFVVNDNQLEGSIPQSINNCTSLQELYLDGNSLTGFVPKGIGKLDKLEVLDLTLNHLRGPLPSNIFNISTLTILRLGENSFSGLLPPYLGVGLFNLKILLLGPNELTGEIPSSISNASKLITLDMSWNKISGAIPNVLGNLSNLIELGLHWNNLNGLIPGTFKKLHSLQGLSLNNNRLQGSIINELCQLKSLSELNLANNMFSGVIPRCLNNTSLRKMNFSYNKLISHIPSSLWSLVDILVLDLSSNALNGTIPLEISNLRAITLLDMSRNQISGNIPTTMGGMQTLITLSLAQNKLQGPIPESLGGMISMESMDLSHNYLSSVIPKSLESLIRLKYINLSYNLLHGEIPKGGPFQNFTAKSFTMNRDLCGKSQLQVHPCKEENKHMSNKVMMLIISSLLVIIIILVVSCYVFLKHKRDHVNKPSNMDLTNVDTTTKISYYELLRATNRFDESNFLGFGSFGSVYKAILSNQEIVAVKVFNSNMEEALRSFDNECTALCNLRHRNLIKVISSCSNDDFACLIMEFMSNGSLDKWLYSHNYCLDILQRLNIMVDVATALEYLHHGSSIPVVHCDIKPSNILLDEDMVAHLSDFGITKLLDEEKLETYTKTLATVGYMAPEYGSKGVVSFKGDVYSYGILLMEMFTRKKPTDEMFVEGLCLKDWVSKSTPHSIINILDANLLHRGSPDISSILPLISSIFELALSCCIEPPEARIMITDVLVSLEKTRSCLCKMLYMHH 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5436g00009 1016 Gene3D Ribonuclease Inhibitor 199 371 IPR032675 -
Pral5436g00009 1016 Gene3D Transferase(Phosphotransferase) domain 1 805 1010 - -
Pral5436g00009 1016 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 271 364 - -
Pral5436g00009 1016 FunFam Inactive leucine-rich repeat receptor-like protein kinase 370 660 - -
Pral5436g00009 1016 SUPERFAMILY L domain-like 273 386 - -
Pral5436g00009 1016 SUPERFAMILY L domain-like 394 651 - -
Pral5436g00009 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 848 860 IPR008271 GO:0004672|GO:0006468
Pral5436g00009 1016 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 1 198 - -
Pral5436g00009 1016 SUPERFAMILY Protein kinase-like (PK-like) 708 1002 IPR011009 -
Pral5436g00009 1016 ProSitePatterns Protein kinases ATP-binding region signature. 735 757 IPR017441 GO:0005524
Pral5436g00009 1016 FunFam Serine-threonine protein kinase plant-type 709 804 - -
Pral5436g00009 1016 Gene3D Ribonuclease Inhibitor 101 198 IPR032675 -
Pral5436g00009 1016 ProSiteProfiles Protein kinase domain profile. 729 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5436g00009 1016 PANTHER OS04G0122200 PROTEIN 408 999 - -
Pral5436g00009 1016 Gene3D Ribonuclease Inhibitor 1 100 IPR032675 -
Pral5436g00009 1016 Gene3D Phosphorylase Kinase; domain 1 710 804 - -
Pral5436g00009 1016 Pfam Leucine rich repeat 112 171 IPR001611 GO:0005515
Pral5436g00009 1016 Pfam Leucine rich repeat 278 336 IPR001611 GO:0005515
Pral5436g00009 1016 Pfam Leucine rich repeat 566 624 IPR001611 GO:0005515
Pral5436g00009 1016 Pfam Leucine rich repeat 422 480 IPR001611 GO:0005515
Pral5436g00009 1016 Pfam Protein kinase domain 731 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5436g00009 1016 SUPERFAMILY RNI-like 3 289 - -
Pral5436g00009 1016 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 805 1013 - -
Pral5436g00009 1016 SMART LRR_typ_2 134 157 IPR003591 -
Pral5436g00009 1016 SMART LRR_typ_2 323 347 IPR003591 -
Pral5436g00009 1016 SMART LRR_typ_2 250 274 IPR003591 -
Pral5436g00009 1016 SMART LRR_typ_2 110 133 IPR003591 -
Pral5436g00009 1016 SMART LRR_typ_2 420 443 IPR003591 -
Pral5436g00009 1016 SMART LRR_typ_2 299 322 IPR003591 -
Pral5436g00009 1016 SMART LRR_typ_2 158 182 IPR003591 -
Pral5436g00009 1016 SMART LRR_typ_2 468 491 IPR003591 -
Pral5436g00009 1016 SMART LRR_typ_2 62 86 IPR003591 -
Pral5436g00009 1016 SMART LRR_typ_2 14 38 IPR003591 -
Pral5436g00009 1016 SMART LRR_typ_2 539 563 IPR003591 -
Pral5436g00009 1016 SMART LRR_typ_2 492 515 IPR003591 -
Pral5436g00009 1016 SMART LRR_typ_2 587 610 IPR003591 -
Pral5436g00009 1016 Gene3D Ribonuclease Inhibitor 372 668 IPR032675 -
Pral5436g00009 1016 SMART serkin_6 729 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5436g00009 Pral-Chr5436 102023 114788 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5436g00009 540 629 Receptor kinase-like Gene Family AT3G47570 33.333 5.59e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral5436g00009 Pkinase 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5436g00009 - K13420 pcin:129285519 1115.14