Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5434g00001 ACAGACAAAGCTTCATTATTAGCAGAAGTAATCCAGCATGTGAAGGAGCTGAAGCGTCAAACTTCAATAATAGCAGAAACAAGCCCAGTGCCGACAGAAACCGACGAGTTGACGGTGGACGACGCTTCCGATGAGGAGGGCAGGTTCGTGATCAAAGCCTCGCTTTGCTGCGAAGACAGGTCCGATCTCTTGCCGGACCTCATCAAGACGTTGAAGGCCCTCAGGTTGAGAACCGTGAAGGCAGAGATCACCACGCTCGGCGGACGCGAGAACGTCTTGTTCGTCACCGGCGAAGAAGAAGATCAGCTCAGTGGCGGTGGCGAGGAGCAGGGACAGCATCAGCATTGTATAAGCTCCATCCAAGAGGCTTTGAAGGCAGTGATGGAGAAGAATGGTGGTGGTGATGAGAATGGGAATGTAAGAGGCAAAGAACTAATAATAATATCAATATCCTCGAACAAAACAGGTCTTTATGATTAG 480 0.4979 TDKASLLAEVIQHVKELKRQTSIIAETSPVPTETDELTVDDASDEEGRFVIKASLCCEDRSDLLPDLIKTLKALRLRTVKAEITTLGGRVXNVLFVTGEEEDQLSGGGEEQGQHQHCISSIQEALKAVMEKNGGGDENGNVRGKELIIISISSNKTGLYD 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5434g00001 160 PANTHER TRANSCRIPTION FACTOR BHLH30 1 134 IPR045847 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5434g00001 Pral-Chr5434 23740 24221 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5434g00001 1 132 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 71.111 6.97e-55 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5434g00001 - - pcin:129322869 241.121