Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5432g00007 CACTTCTGGGTTGCGATATCCATGGTCTTCTTTATTGCTGCTACAGTGTTCACTCTTCTTAAGATATGTGGTGATGTTGCTGCTCTGGGCTGGTGGGACTTATTTATTAACTTTGGCATTGCAGAGTGCTTTGCCTTTCTTGTTTGTACAAAGTGGTACAATCCAACAATTCATGGAAAATGTTACATTGACACAGCAGATCCTAGCTCATCATCACTTTCATCATCATTTACTATAAGATACCTGGACTGGGATAGAGGTTTGGTGGTTCCTACGGATGAAGAGAGGCAGCAAAGTAGCCTATGCAGTCTACAGGACATTGGTGGGCATATCATGAAGATTCCATTCATAGCTTTTCAAATTCTGCTATTTATGCATTTGGAGGGAACGCCACCTGCTGCCAGAACCATGTCGAGTGCTGTTGTCTTTTCTCCCCTTTTTCTGTTGCAAGGAGCTGGGGTTTTATTTGCGGCTTATAGATTAGTGGAGAAATTAGTTCTCTTAGTTTACAGTGGAGATGTTCCTGGAAGATACTCTGATGTAGCACTAAAAGCCCGTGATTGTTTTGGATTCTTGCACCATGGCTCAAGGCTCCTGGGCTGGTGGTCAATAGATGAAGGAAGCCGAGAGGAACAAGCCAGGCTTTATTGCGATGGGGGTTCAGGGTATAATACTTTCTCCCCTGATATGGTGAAGAAAATGCCTAAAGCGGATCTTGTTGAGGAGATCTGGAAACTACAAGCTGCCCTAGGTGAGCAGTCAGAGATTACAAAATTTAGCCAGCAGGAGTATGAAAGACTCCAAAACGAAAGGATCCTGTGTAGAGTTTGCTTTGAAGATCAGATCAATGTCGTCCTGCTTCCATGCAGGCATCACATTCTTTGCAACACATGTGGTGAAAAGTGCAAGAGGTGCCCTATCTGCCGTGTCTCCATTGAAGAACGAATGCCTGTATATGATGTATAG 966 0.4389 HFWVAISMVFFIAATVFTLLKICGDVAALGWWDLFINFGIAECFAFLVCTKWYNPTIHGKCYIDTADPSSSSLSSSFTIRYLDWDRGLVVPTDEERQQSSLCSLQDIGGHIMKIPFIAFQILLFMHLEGTPPAARTMSSAVVFSPLFLLQGAGVLFAAYRLVEKLVLLVYSGDVPGRYSDVALKARDCFGFLHHGSRLLGWWSIDEGSREEQARLYCDGGSGYNTFSPDMVKKMPKADLVEEIWKLQAALGEQSEITKFSQQEYERLQNERILCRVCFEDQINVVLLPCRHHILCNTCGEKCKRCPICRVSIEERMPVYDV 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5432g00007 321 ProSiteProfiles Zinc finger RING-type profile. 274 309 IPR001841 -
Pral5432g00007 321 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 250 320 IPR013083 -
Pral5432g00007 321 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 1 321 - -
Pral5432g00007 321 FunFam Kinesin-like protein KIN-7D, mitochondrial 251 319 - -
Pral5432g00007 321 Pfam Transmembrane Fragile-X-F protein 1 149 IPR019396 -
Pral5432g00007 321 Pfam Zinc finger, C3HC4 type (RING finger) 273 314 - -
Pral5432g00007 321 SUPERFAMILY RING/U-box 265 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5432g00007 Pral-Chr5432 99310 107339 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5432g00007 1 321 C3H Transcription Factor Family AT1G73950 65.432 1.54e-148 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5432g00007 - - tcc:18610547 531.176