Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pral5431g00006 | ATGGAGCAGTACCTCCGAGAGAACTTCGACGTGTCGCCCAAGCGGCCCTCGGAGGCCAACCTCCGCCGCTGGAGATCCGCCGTCTCCATCGTCAAGAATCCTCGTCGCCGCTTTCGCATGGTCGCTGACCTCGCTAAGCGCGCCGAGGCTGAGAAGAAGCGCAAGAAACTCCAGGAAAAAGTACGAGTAGCTCTCTATGTGCAAAAAGCAGCATTGCAGTTTATTGACGCTGGGCAGCGTGGTTCGTCCATGCTCTCCCGGGAGGTCAAGGAATCGGGTTTTGCTATTGAACCCGACGACTTAGCATCCATATGCCGATCACATAATAGCAAAGGCTTAGAACTTAGTGGAGGAGTAGCAGGATTGGCAAAAGCAGTTAATGTGTCACTGGAAGACGGTGTTCGTTCTAGTGATGTTCCTCGTAGACAAAATGTCTTTGGTTCTAACCGCTTTGCTGAGAAGCCCTCAAGAGGATTTTGGATGTTCGTTTGGGATGCAATGCAAGACTTGACTCTCATTATCCTTTTGTTATGTGCTTTTGTTTCAATAGGAGTTGGAATCCCCACTGACGGTTGGCCAAAAGGTGTGTATGATGGAGTTGGAATCGCACTCTCTATTCTCTTAGTTGTCTTCGTCACATCAGTTAGTGACTATAAACAGTCTTTGCAATTTAAAGATTTGGAAAATGAGAAGAAAAATGTTACCATTCAAGTCATTAGAGATCGGAACAGACAAAAGATTTCAATCTATGAGTTAGTGGTAGGAGATATTGTTCATTTATCAATTGGAGACATAGTTCCTGCAGATGGATTATTCATATCGGGTTACAATTTATTAGTTGATGAATCAAGCTTATCAGGCGAGAGCGAGGCTGTGCATGTCGACCAACGTGCTCCTTTTCTTCTGGCTGGGACCAAAGTACAAGATGGATCTGCTAAGATGTTAGTAACTTCTGTTGGTATGAGGACTGAATGGGGAAGACTGATGGATACTCTGAACGAAGTGGGAGACGATGAGACGCCGTTGCAGGTCAAATTAAATGGGGTTGCGACCATAATTGGAAAGATTGGCTTGGGTTTCGCCCTGATGACATTCTTGGTTCTGACTGGCAGGTTTTTGGTGCGTAAAATAGTTCATAATGAAATCTCTCAATGGTCCTTAAACGACGCATCTGAGCTTCTCAATTTCTTTGCGACTGCTGTAATTATAATAGTTGTGGCAGTTCCAGAGGGGCTTCCTTTGGCAGTGACGCTAAGCCTTGCGTTCGCAATGAAGAAGTTAATGAACGACAAGGCACTTGTCAGGCACCTCTCTGCGTGCGAGACGATGGGCTCAGCTGGTTCTATTTGCACAGACAAAACAGGAACCTTGACCACAAATCACATGGTAGTACATAAAATATGGATTTGCGGACAAACTAAGGAGATGAGAAACAATAGCAGTGAGAATTTGTTAAAGTCATCCATTTCTGAACAAATATTTGACCTCTTTTTGCAGTCAATATTTCAGAATACTGGCTCAGAGGTGGTCAAAGGTGAAAATGGGAAGAATAAGGTTATGGGTACTCCGACAGAGAAGGCATTGTTGGAATTTGGGTTGCTTTCTGGAGGTGAACCTGGGGTTTATAATGAGAAGTACAAGATCTTAAAGATCGAACCATTCAATTCGAACAGAAAAAGAATGTCAGTGCTTGTGGCTCTTCCCGGTACTGCCAATAAGTCTAGAGCATTCTGTAAAGGAGCATCAGAAATAGTTCTGGAAATGTGCGACAAACTTGTGGACACAAATGGCAAAGTCGTGCGCCTGTTCGAAGAACAAAGAAGGAACATCGCAAAAGTTATCAATGATTTTGCTTCTGAAGCTCTAAGAACTCTCTCCATTGCCTTTAAAGATATCGAAGGAAATTCTGGTGGGGATAATATTCCTGAGGAGAACTTTACATTGTTGGCAATTGTTGGGATCAAGGATCCTGTGAGGCCTGGAGTAAAAAAAGCTGTGGAAACTTGCAAAGCAGCTGGTATTTCGGTAAAGATGGTGACTGGTGATAACATCATTACTGCTAAAGCAATAGCTAGAGAATGCGGTATCTTGACAGATGGTATAGCCATCGAAGGACCCGAATTTCGCAAGAAGACCCAGCAAGAAATGGAGGAGATAATACCAAAAATACAGGTTATGGCTCGATCTTTGCCTCTGGACAAGCACACTTTGGTGACCCACTTGAGGACGGACTTCGACGAAGTTGTTGCAGTAACTGGTGATGGGACAAACGATGCTCCAGCTTTGCGTGAGGCGGATATTGGCCTTGCCATGGGCATAGCAGGAACAGAGGTCGCAAAAGAGAACGCGGATGTCATTGTGATGGATGATAACTTCACAACCATACTTAACGTTGCCAGATGGGGCCGTTCTGTGTACATCAATGTTCAGAAGTTTGTTCAGTTCCAATTAACGGTTAATGTTGTGGCTCTCATCCTCAATTTTGTTTCCGCATGTGTGTCAGGTTCTGCTCCTCTTACCGCTGTTCAAATGCTTTGGGTGAACATGATCATGGACACTCTTGGTGCTTTGGCTCTGGCTACAGAACCTCCCCATGATGGGCTGATGAAAAGACCACCTGTTGGAAGGAATGCCAATCTCATAACCGGCATCATGTGGAGGAACATAATTGGTCAGAGCCTCTATCAGATAGCCGTCCTTTTGGTTCTCAAATTTCGCGGTGAACAGATTATGAAGCTTAATGGTCCTGATGCAACCTCTGTTCTGAACACTTTCATATTCAACGTCTTCGTATTTTGCCAGGTATTCAACGAGATAAACAGCCGTGACATGGAGAAGATCAATGTTTTCCGAGGCATATTCAGCAGCTGGATCTTCCTGGGAGTTTTGGCCTCAACAATATGTTTCCAAGCCATACTTGTTGAATTTCTGGGTACCTTTGCTCAAACAGTACCACTAAGCTGGGATCTATGGCTAGCCAGTGTCTTAATTGGTTCAGTGAGCTTACCCTTAGCCGCCATTGTCAAATGCATCCCCGTTCCAGTGGCTGGTTTCGTGGACCATCACCATCATCATGATTACGTACCCATCCCGAGTGGCCCAGATATGGCTTGA | 3114 | 0.4486 | MEQYLRENFDVSPKRPSEANLRRWRSAVSIVKNPRRRFRMVADLAKRAEAEKKRKKLQEKVRVALYVQKAALQFIDAGQRGSSMLSREVKESGFAIEPDDLASICRSHNSKGLELSGGVAGLAKAVNVSLEDGVRSSDVPRRQNVFGSNRFAEKPSRGFWMFVWDAMQDLTLIILLLCAFVSIGVGIPTDGWPKGVYDGVGIALSILLVVFVTSVSDYKQSLQFKDLENEKKNVTIQVIRDRNRQKISIYELVVGDIVHLSIGDIVPADGLFISGYNLLVDESSLSGESEAVHVDQRAPFLLAGTKVQDGSAKMLVTSVGMRTEWGRLMDTLNEVGDDETPLQVKLNGVATIIGKIGLGFALMTFLVLTGRFLVRKIVHNEISQWSLNDASELLNFFATAVIIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSAGSICTDKTGTLTTNHMVVHKIWICGQTKEMRNNSSENLLKSSISEQIFDLFLQSIFQNTGSEVVKGENGKNKVMGTPTEKALLEFGLLSGGEPGVYNEKYKILKIEPFNSNRKRMSVLVALPGTANKSRAFCKGASEIVLEMCDKLVDTNGKVVRLFEEQRRNIAKVINDFASEALRTLSIAFKDIEGNSGGDNIPEENFTLLAIVGIKDPVRPGVKKAVETCKAAGISVKMVTGDNIITAKAIARECGILTDGIAIEGPEFRKKTQQEMEEIIPKIQVMARSLPLDKHTLVTHLRTDFDEVVAVTGDGTNDAPALREADIGLAMGIAGTEVAKENADVIVMDDNFTTILNVARWGRSVYINVQKFVQFQLTVNVVALILNFVSACVSGSAPLTAVQMLWVNMIMDTLGALALATEPPHDGLMKRPPVGRNANLITGIMWRNIIGQSLYQIAVLLVLKFRGEQIMKLNGPDATSVLNTFIFNVFVFCQVFNEINSRDMEKINVFRGIFSSWIFLGVLASTICFQAILVEFLGTFAQTVPLSWDLWLASVLIGSVSLPLAAIVKCIPVPVAGFVDHHHHHDYVPIPSGPDMA | 1037 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pral5431g00006 | 1037 | NCBIfam | HAD-IC family P-type ATPase | 717 | 840 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Pral5431g00006 | 1037 | NCBIfam | HAD-IC family P-type ATPase | 202 | 512 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Pral5431g00006 | 1037 | FunFam | Calcium-transporting ATPase | 651 | 797 | - | - | |
| Pral5431g00006 | 1037 | Gene3D | - | 165 | 1010 | - | - | |
| Pral5431g00006 | 1037 | Coils | Coil | 40 | 60 | - | - | |
| Pral5431g00006 | 1037 | FunFam | Calcium-transporting ATPase | 211 | 333 | - | - | |
| Pral5431g00006 | 1037 | FunFam | Calcium-transporting ATPase | 16 | 76 | - | - | |
| Pral5431g00006 | 1037 | PRINTS | P-type cation-transporting ATPase superfamily signature | 450 | 464 | - | - | |
| Pral5431g00006 | 1037 | PRINTS | P-type cation-transporting ATPase superfamily signature | 752 | 771 | - | - | |
| Pral5431g00006 | 1037 | PRINTS | P-type cation-transporting ATPase superfamily signature | 281 | 295 | - | - | |
| Pral5431g00006 | 1037 | PRINTS | P-type cation-transporting ATPase superfamily signature | 776 | 788 | - | - | |
| Pral5431g00006 | 1037 | PRINTS | P-type cation-transporting ATPase superfamily signature | 650 | 661 | - | - | |
| Pral5431g00006 | 1037 | PRINTS | P-type cation-transporting ATPase superfamily signature | 672 | 682 | - | - | |
| Pral5431g00006 | 1037 | Gene3D | - | 16 | 77 | - | - | |
| Pral5431g00006 | 1037 | SFLD | p-type atpase | 432 | 804 | IPR044492 | - | |
| Pral5431g00006 | 1037 | Pfam | E1-E2 ATPase | 235 | 428 | - | - | |
| Pral5431g00006 | 1037 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 111 | 1013 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 | |
| Pral5431g00006 | 1037 | FunFam | Calcium-transporting ATPase | 769 | 1015 | - | - | |
| Pral5431g00006 | 1037 | Gene3D | - | 460 | 657 | IPR023299 | GO:0000166 | |
| Pral5431g00006 | 1037 | FunFam | Calcium-transporting ATPase | 460 | 657 | - | - | |
| Pral5431g00006 | 1037 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 117 | 1013 | IPR023298 | - | |
| Pral5431g00006 | 1037 | SUPERFAMILY | Calcium ATPase, transduction domain A | 234 | 331 | IPR008250 | - | |
| Pral5431g00006 | 1037 | Pfam | Cation transporting ATPase, C-terminus | 837 | 1010 | IPR006068 | - | |
| Pral5431g00006 | 1037 | CDD | P-type_ATPase_Ca_PMCA-like | 141 | 885 | - | - | |
| Pral5431g00006 | 1037 | SFLD | C1.7: P-type atpase like | 432 | 804 | - | - | |
| Pral5431g00006 | 1037 | PRINTS | H+-transporting ATPase (proton pump) signature | 610 | 628 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Pral5431g00006 | 1037 | PRINTS | H+-transporting ATPase (proton pump) signature | 752 | 768 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Pral5431g00006 | 1037 | PRINTS | H+-transporting ATPase (proton pump) signature | 784 | 809 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Pral5431g00006 | 1037 | Pfam | haloacid dehalogenase-like hydrolase | 449 | 766 | - | - | |
| Pral5431g00006 | 1037 | Gene3D | - | 133 | 333 | - | - | |
| Pral5431g00006 | 1037 | Pfam | Cation transporter/ATPase, N-terminus | 117 | 182 | IPR004014 | - | |
| Pral5431g00006 | 1037 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 5 | 49 | IPR024750 | GO:0005516 | |
| Pral5431g00006 | 1037 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 456 | 662 | IPR023299 | GO:0000166 | |
| Pral5431g00006 | 1037 | Gene3D | - | 447 | 797 | IPR023214 | - | |
| Pral5431g00006 | 1037 | SMART | Cation_ATPase_N_a_2 | 113 | 187 | IPR004014 | - | |
| Pral5431g00006 | 1037 | SUPERFAMILY | HAD-like | 449 | 857 | IPR036412 | - | |
| Pral5431g00006 | 1037 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 452 | 458 | IPR018303 | - | |
| Pral5431g00006 | 1037 | PANTHER | CATION TRANSPORTING ATPASE | 77 | 1013 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pral5431g00006 | Pral-Chr5431 | 42517 | 50863 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pral5431g00006 | 57 | 1034 | Primary Pumps ATPases | AT3G57330 | 67.109 | 0.0 | 1351 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pral5431g00006 | K01537 | - | gmx:100801260 | 1582.39 |