Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral5431g00003 | ATGAATGATGGAGATGTTGAGCTTTCAGATGGTTTCTTATTGTCGAATCCAGAATCGTCGAGCAATGTTCAGTCTTCAACATCCATGAATAAAATCAATGAATTCTTGAGGAACACCAGAACATGCACCCATACTCACACTTGCAACCCTCCTGGCCCAGATGCAGCACATACCCACACATGTTACCACACACACACCCAAGTCATTGCGTCTGAAGAAGATGATCATACAGATGATAAGGAGCATACCAACACAAAACGAAAACGGCCTTCGGGTAATAGAGAAGCTGTTCGAAAGTATAGGGAGAAGAAGAAGGCACAGACAGCTTACCTAGAGGAGGAAGTTAAGAAATTGCGTCTGCAGAATCAGCAATTAGTTAGGAAGCTACAAGGGCATGCACATCTTGAAGCTGAGGTTTTGAGGTTGAGGAGCATCCTGGTTGACCTCAAGGGAAAAATTGACAATGAGTTGGGTGTTTTCCCCTATAAAAAGCAGTGTAATGGCTCTTCCTCAATCTTTAAAGAGGGGCACACCAACATGCTGCCCACGGACCGCGGGACTGATCTTCAGTGTCAGACCAATTTCCAATGCTTTGATCAACAGGCAGGATTATCATCTCAGGTTGGTACCTGTGGAAATGAAAATTTTATGATTCCATGTGAAGGGAACTGTGAACCTCTAGCCGTGAATTGTCAAGGTAACACGAATAACATATCAAATACTGAGGGGCAAGTTGTGGACTCAGTGGATAACTTGATGTCATCTGCATCTCAAGATAAGTAA | 783 | 0.4355 | MNDGDVELSDGFLLSNPESSSNVQSSTSMNKINEFLRNTRTCTHTHTCNPPGPDAAHTHTCYHTHTQVIASEEDDHTDDKEHTNTKRKRPSGNREAVRKYREKKKAQTAYLEEEVKKLRLQNQQLVRKLQGHAHLEAEVLRLRSILVDLKGKIDNELGVFPYKKQCNGSSSIFKEGHTNMLPTDRGTDLQCQTNFQCFDQQAGLSSQVGTCGNENFMIPCEGNCEPLAVNCQGNTNNISNTEGQVVDSVDNLMSSASQDK | 260 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral5431g00003 | 260 | CDD | bZIP | 86 | 130 | - | - | |
Pral5431g00003 | 260 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 83 | 149 | IPR004827 | GO:0003700|GO:0006355 | |
Pral5431g00003 | 260 | PANTHER | CCAAT/ENHANCER BINDING PROTEIN | 16 | 161 | IPR031106 | GO:0003700|GO:0006351 | |
Pral5431g00003 | 260 | Pfam | Basic region leucine zipper | 86 | 138 | IPR004827 | GO:0003700|GO:0006355 | |
Pral5431g00003 | 260 | SMART | brlzneu | 81 | 148 | IPR004827 | GO:0003700|GO:0006355 | |
Pral5431g00003 | 260 | MobiDBLite | consensus disorder prediction | 13 | 28 | - | - | |
Pral5431g00003 | 260 | Gene3D | - | 71 | 150 | - | - | |
Pral5431g00003 | 260 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Pral5431g00003 | 260 | Coils | Coil | 101 | 128 | - | - | |
Pral5431g00003 | 260 | SUPERFAMILY | Leucine zipper domain | 86 | 132 | IPR046347 | GO:0003700|GO:0006355 | |
Pral5431g00003 | 260 | MobiDBLite | consensus disorder prediction | 68 | 103 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral5431g00003 | Pral-Chr5431 | 6386 | 7924 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral5431g00003 | 1 | 221 | bZIP Transcription Factor Family | AT4G35040 | 43.172 | 2.17e-54 | 174 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Pral5431g00003 | bZIP_2 | 4e-14 | CL0018 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral5431g00003 | K25785 | - | vvi:100255414 | 302.367 |