Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5430g00004 ATGGGGTACTTCTCCTGCAGAGCTGAATCTGCCGTTTCAACCTCCAATTCTGTATCCCCATCTTCCTCTTCTAAACCCTCCTCTGCTCAAAAACCTGAGAAGCCCATCAAGATCCAACAGTTTGATTACAGTGACCTCGAGGCCGCCACTAATGGCTTCTCCGACCGAAAGCTCCTAGGCAAAGGTAGCCATGGCTATGTCTACAAAGCCGTTCTTCGAGGCCGTCCTGTCGCCGTCAAGAGGCCTTCGAGAGCTTACGGTGCTGTTCTTCGACGACCCAGTTCGTTCTCTTCTTCGTCGGCGCCGGAGATTACGAACGAGGTGGACAACGAGATCGACATCTTGTCGAAAATTCAGAGCCCGAGATTGGTCAATTTGGTGGGTTTCTCGAACGATTCGAAAGATAGACTTCTGGTTGTGGAGTTTATGAGCAATGGAACCCTCTACGATGTTCTTCATTCTTCTGCACGACCACCCAATTGGGGTCGGAGAATTCGATTGGCTCTGCAAACTGCTAAGGCCATCGATACCCTCCATTCCTCAACCCCACCTGTAATTCACCGAGACATCAAATCTGCAAATGTTCTAATAGATCGCAACTTCAATGCTCGATTGGGAGATTTTGGATTAGCCCTGCGAGGCCATGAAGATGATTATAGACTCAGGTCTACTCCTCCAGCAGGTACTATGGGGTATCTTGATCCTTGTTATGTGACCCCAGATAACTTGAGTACAAAAACTGATGTGTTTAGTTTTGGGATTTTGCTGTTAGAGATAATTAGTGGTAGAAAAGCCATTGATATTACATACTCACCACCTTCCATTGTGGATTGGGCCATTCCTCTCATAAAGAAAGGAAAGTTATTGGCTGTTTATGATCCAAGGATATCACCTCCTAAGGATCCAGTTGTTAGGAAGCAATTGGCTGTGATTGCTGCAAAATGTGTAAGGTCTTGCAGAGAAAGAAGGCCTTCAATGAAGGAAATAGTTGCTTGGCTTACTGGATTGTGTAAACTGGTACCTCTTCATTCTTGGAATGGTTTTAACAATCCCTGTATGATGATTGAGACTGTGGGACGTCCAATTGAAGCCAGAAGTGCCCATATGACTCCAAGACAAGACGGAGGTTTAGAAGGTGGAAATTTTGAAGCTTTAGATGCTAGATTATCTAAATCTGCAAATAGATATTCAAGGAGAGTGTATTCTGATCTGGGGTTCAGAAGCAACTTGATGGAACTTATGACTAACCCTGAGGAACCAGATAAGTCTGGTTATAGAGTTTCCAGCTCAAGGTTTGGTAGTGGAAGATATTTCACAAGAGGCATAAATCTCTACAGAGCTTGTGGTACAGATAAAGATGCTTTTGGTTTGAGTGAAGGCCAGATTGTTGGTGATGGGAGCTCAAATTTGTGTCCAAAACAAGAAGGTAATTCTGGATCAGATTTGAATTCTCAGACAGCTGAAGCTAATTCCTAG 1476 0.4438 MGYFSCRAESAVSTSNSVSPSSSSKPSSAQKPEKPIKIQQFDYSDLEAATNGFSDRKLLGKGSHGYVYKAVLRGRPVAVKRPSRAYGAVLRRPSSFSSSSAPEITNEVDNEIDILSKIQSPRLVNLVGFSNDSKDRLLVVEFMSNGTLYDVLHSSARPPNWGRRIRLALQTAKAIDTLHSSTPPVIHRDIKSANVLIDRNFNARLGDFGLALRGHEDDYRLRSTPPAGTMGYLDPCYVTPDNLSTKTDVFSFGILLLEIISGRKAIDITYSPPSIVDWAIPLIKKGKLLAVYDPRISPPKDPVVRKQLAVIAAKCVRSCRERRPSMKEIVAWLTGLCKLVPLHSWNGFNNPCMMIETVGRPIEARSAHMTPRQDGGLEGGNFEALDARLSKSANRYSRRVYSDLGFRSNLMELMTNPEEPDKSGYRVSSSRFGSGRYFTRGINLYRACGTDKDAFGLSEGQIVGDGSSNLCPKQEGNSGSDLNSQTAEANS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5430g00004 491 FunFam Serine/threonine-protein kinase-like protein 143 346 - -
Pral5430g00004 491 Gene3D Transferase(Phosphotransferase) domain 1 143 341 - -
Pral5430g00004 491 SUPERFAMILY Protein kinase-like (PK-like) 28 333 IPR011009 -
Pral5430g00004 491 SMART serkin_6 53 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5430g00004 491 FunFam Serine/threonine-protein kinase-like protein At1g28390 22 142 - -
Pral5430g00004 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Pral5430g00004 491 Gene3D Phosphorylase Kinase; domain 1 24 142 - -
Pral5430g00004 491 Pfam Protein tyrosine and serine/threonine kinase 57 331 IPR001245 GO:0004672|GO:0006468
Pral5430g00004 491 ProSiteProfiles Protein kinase domain profile. 53 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5430g00004 491 ProSitePatterns Protein kinases ATP-binding region signature. 59 80 IPR017441 GO:0005524
Pral5430g00004 491 PANTHER OS01G0253100 PROTEIN 21 336 - -
Pral5430g00004 491 MobiDBLite consensus disorder prediction 465 491 - -
Pral5430g00004 491 MobiDBLite consensus disorder prediction 1 35 - -
Pral5430g00004 491 MobiDBLite consensus disorder prediction 8 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5430g00004 Pral-Chr5430 32807 34816 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5430g00004 41 333 Receptor kinase-like Gene Family AT3G59420 44.147 3.44e-74 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pral5430g00004 PK_Tyr_Ser-Thr 1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5430g00004 - - vum:124832395 738.028