Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5429g00046 ATGGGAAGAGAAACTTGGTGGGTCCTTTTCCTTCTCTCAGCACTACTCTTTCCGGATGAAACCCATGGAAGCTGCAGAAGGCAAGAACAAGCCCTCAAGAATCTGAATAAGGCCAAATTCTGGGGAGGAGGTTCCATTGACAGAAGCAGTGAAACATCCTTGGAGGTAGATAAGGCTGTGTTTGGAGACTCCGATGATAATTCTCGTTACTACTACCCTCAACAAGGACTGAAAGAGAAAGATAGGATAGAGAGACTTCCAGGACAGCCTGAAAATGTCAACATCTCTCAGTATGGAGGGTATGTGACTGTGGATAAAGTTGCAGGAAGAGCTTTTTATTATTATTTTGTTGAAGCCCAACAATCTAATAGACACAAATTGCCTCTTCTTCTCTGGCTCAATGGAGGTCCAGGATGTTCATCTCTAGCATATGGAGCAATGCAAGAACTTGGACCTTTCCGAGTAAACAGTGACGGCAAAACACTTCAGACAAACAAATACTCATGGAACTATGCTGCAAATGTATTATTCTTAGAATCACCAGCAGGAGTGGGATTTTCATATTCAAATAAGACATCGGATTATGACATTAATGGGGATAGAAGAACTGCTGCAGACAACTACGTGTTCTTAAGGAATTGGTTGAAAAGGTTTGCAGAGTATAAGAATTATGATTTCTACATTGCTGGGGAGAGCTATGCTGGGCATTATGTTCCTCAGCTTGCTCACAACATTCTCTACCACAACAACCACCCCAACTCCTCTTTCTTCATCAATCTCAAAGGCATCCTGATAGGGAATGCAGTGATAAATGATGAGACAGACAACAAAGGAATGTGGGATTTCTTGGCGAGCCATGCCATAATATCAGACCAAGCTGCGCATGATGTTACCAAATTCTGTGACTTCTCAGAGATTACCACTACTCATAGCGATGAATGCAAAGCAGCTTATGAGGAAATAGGCAAAGATACTTCCTTTATTGACATATACAATATCTATGCTCCTCAGTGCCTTAATTCCAACCTCACTTCCCACCCTAAGCCTCCCTCAGTAATGATAGATCCATGCAGTGAGTATTATGTGGATGCATACATGAACAGGGGTGAGGTGCAAGAGGCATTACATGCCAATGTCACAAAACTGACACATGAGTGGTATCCTTGTGTTGGTGTCCATTGGATTGATAGCCCTTCCACCATGCTTCCCCTCTTACAAGAAATCCTCAATCATAGCCTTCGTGTTTGGATTTACAGTGGCGACATAGATGGGATGGTGCCAGTAACTTCAACCAAGTATTCCATTGAGAAGTTGAATCTTCCTCTCAAGACTGTTTGGCATCCTTGGTTCCTAAATGGAGAGGTAGGAGGATACACACAAGAGTACAAGGGAGGCTTGACATTTGCAACAGTGAGAGGAGCAGGGCATGAAGTGCCAAGCTACCAGCCAGGAAGAGCCCTTTCTTTGGTCAATCACTTCTTAAAAGGCATCCCTCTTCCTAATTCCACTGCCTCAATACTACATTATGCCTAA 1533 0.4312 MGRETWWVLFLLSALLFPDETHGSCRRQEQALKNLNKAKFWGGGSIDRSSETSLEVDKAVFGDSDDNSRYYYPQQGLKEKDRIERLPGQPENVNISQYGGYVTVDKVAGRAFYYYFVEAQQSNRHKLPLLLWLNGGPGCSSLAYGAMQELGPFRVNSDGKTLQTNKYSWNYAANVLFLESPAGVGFSYSNKTSDYDINGDRRTAADNYVFLRNWLKRFAEYKNYDFYIAGESYAGHYVPQLAHNILYHNNHPNSSFFINLKGILIGNAVINDETDNKGMWDFLASHAIISDQAAHDVTKFCDFSEITTTHSDECKAAYEEIGKDTSFIDIYNIYAPQCLNSNLTSHPKPPSVMIDPCSEYYVDAYMNRGEVQEALHANVTKLTHEWYPCVGVHWIDSPSTMLPLLQEILNHSLRVWIYSGDIDGMVPVTSTKYSIEKLNLPLKTVWHPWFLNGEVGGYTQEYKGGLTFATVRGAGHEVPSYQPGRALSLVNHFLKGIPLPNSTASILHYA 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5429g00046 510 Pfam Serine carboxypeptidase 87 496 IPR001563 GO:0004185|GO:0006508
Pral5429g00046 510 ProSitePatterns Serine carboxypeptidases, histidine active site. 466 483 IPR033124 GO:0004185
Pral5429g00046 510 Gene3D alpha/beta hydrolase 77 340 IPR029058 -
Pral5429g00046 510 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 82 483 IPR001563 GO:0004185|GO:0006508
Pral5429g00046 510 FunFam Carboxypeptidase 77 340 - -
Pral5429g00046 510 SUPERFAMILY alpha/beta-Hydrolases 79 500 IPR029058 -
Pral5429g00046 510 Gene3D - 401 496 - -
Pral5429g00046 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 177 IPR001563 GO:0004185|GO:0006508
Pral5429g00046 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 214 239 IPR001563 GO:0004185|GO:0006508
Pral5429g00046 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 466 479 IPR001563 GO:0004185|GO:0006508
Pral5429g00046 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 178 188 IPR001563 GO:0004185|GO:0006508
Pral5429g00046 510 Gene3D - 357 392 - -
Pral5429g00046 510 FunFam Carboxypeptidase 401 496 - -
Pral5429g00046 510 ProSitePatterns Serine carboxypeptidases, serine active site. 228 235 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5429g00046 Pral-Chr5429 567582 571321 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5429g00046 365 499 Calmodulin-binding Proteins AT2G22960 31.618 1.02e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5429g00046 K16297 - pcin:129316698 811.601