Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5429g00045 ATGGGAAGAGAAACTTGGTGGGTCCTTTTCCTTCTCTCAGCACTACTCTTTCCGGATGAAACCCATGGAAGCTGCAGAAGGCAAGAACAAGCCCTCAAGAATCTGAATAAGGCCAAATTCTGGGGAGGAGGTTCCATTGACAGAAGCAGTGAAACATCCTTGGAGGTAGATAAGGCTGTGTTTGGAGACTCCGATGATAATTCTCGTTACTACTACCCTCAACAAGGACTGAAAGAGAAAGATAGGATAGAGAGACTTCCAGGACAGCCTGAAAATGTCAACATCTCTCAGTATGGAGGGTATGTGACTGTGGATAAAGTTGCAGGAAGAGCTTTTTATTATTATTTTGTTGAAGCCCAACAATCTAATAGACACAAATTGCCTCTTCTTCTCTGGCTCAATGGAGGTCCAGGATGTTCATCTCTAGCATATGGAGCAATGCAAGAACTTGGACCTTTCCGAGTAAACAGTGACGGCAAAACACTTCAGACAAACAAATACTCATGGAACTATGTTGCAGCTGCAAATGTATTATTCTTAGAATCACCAGCAGGAGTGGGATTTTCATATTCAAATAAGACATCGGATTATGACATTAATGGGGATAGAAGAACTGCTGCAGACAACTACGTGTTCTTAAGGAATTGGTTGAAAAGGTTTGCAGAGTATAAGAATTATGATTTCTACATTGCTGGGGAGAGCTATGCTGGGCATTATGTTCCTCAGCTTGCTCACAACATTCTCTACCACAACAACCACCCCAACTCCTCTTTCTTCATCAATCTCAAAGGCATCCTGATAGGGAATGCAGTGATAAATGATGAGACAGACAACAAAGGAATGTGGGATTTCTTGGCGAGCCATGCCATAATATCAGACCAAGCTGCGCATGATGTTACCAAATTCTGTGACTTCTCAGAGATTACCACTACTCATAGCGATGAATGCAAAGCAGCTTATGAGGAAATAGGCAAAGATACTTCCTTTATTGACATATACAATATCTATGCTCCTCAGTGCCTTAATTCCAACCTCACTTCCCACCCTAAGCCTCCCTCAGTAATGATAGATCCATGCAGTGAGTATTATGTGGATGCATACATGAACAGGGGTGAGGTGCAAGAGGCATTACATGCCAATGTCACAAAACTGACACATGAGTGGTATCCTTGTGTTGGTGTCCATTGGATTGATAGCCCTTCCACCATGCTTCCCCTCTTACAAGAAATCCTCAATCATAGCCTTCGTGTTTGGATTTACAGTGGCGACATAGATGGGATGGTGCCAGTAACTTCAACCAAGTATTCCATTGAGAAGTTGAATCTTCCTCTCAAGACTGTTTGGCATCCTTGGTTCCTAAATGGAGAGGTAGGAGGATACACACAAGAGTACAAGGGAGGCTTGACATTTGCAACAGTGAGAGGAGCAGGGCATGAAGTGCCAAGCTACCAGCCAGGAAGAGCCCTTTCTTTGGTCAATCACTTCTTAAAAGGCATCCCTCTTCCTAATTCCACTGCCTCAATACTACATTATGCCTAA 1539 0.4314 MGRETWWVLFLLSALLFPDETHGSCRRQEQALKNLNKAKFWGGGSIDRSSETSLEVDKAVFGDSDDNSRYYYPQQGLKEKDRIERLPGQPENVNISQYGGYVTVDKVAGRAFYYYFVEAQQSNRHKLPLLLWLNGGPGCSSLAYGAMQELGPFRVNSDGKTLQTNKYSWNYVAAANVLFLESPAGVGFSYSNKTSDYDINGDRRTAADNYVFLRNWLKRFAEYKNYDFYIAGESYAGHYVPQLAHNILYHNNHPNSSFFINLKGILIGNAVINDETDNKGMWDFLASHAIISDQAAHDVTKFCDFSEITTTHSDECKAAYEEIGKDTSFIDIYNIYAPQCLNSNLTSHPKPPSVMIDPCSEYYVDAYMNRGEVQEALHANVTKLTHEWYPCVGVHWIDSPSTMLPLLQEILNHSLRVWIYSGDIDGMVPVTSTKYSIEKLNLPLKTVWHPWFLNGEVGGYTQEYKGGLTFATVRGAGHEVPSYQPGRALSLVNHFLKGIPLPNSTASILHYA 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5429g00045 512 FunFam Carboxypeptidase 403 498 - -
Pral5429g00045 512 Pfam Serine carboxypeptidase 87 498 IPR001563 GO:0004185|GO:0006508
Pral5429g00045 512 ProSitePatterns Serine carboxypeptidases, serine active site. 230 237 IPR018202 GO:0004185
Pral5429g00045 512 ProSitePatterns Serine carboxypeptidases, histidine active site. 468 485 IPR033124 GO:0004185
Pral5429g00045 512 Gene3D alpha/beta hydrolase 77 342 IPR029058 -
Pral5429g00045 512 Gene3D - 359 394 - -
Pral5429g00045 512 Gene3D - 403 498 - -
Pral5429g00045 512 SUPERFAMILY alpha/beta-Hydrolases 79 502 IPR029058 -
Pral5429g00045 512 PRINTS Carboxypeptidase C serine protease (S10) family signature 468 481 IPR001563 GO:0004185|GO:0006508
Pral5429g00045 512 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 177 IPR001563 GO:0004185|GO:0006508
Pral5429g00045 512 PRINTS Carboxypeptidase C serine protease (S10) family signature 216 241 IPR001563 GO:0004185|GO:0006508
Pral5429g00045 512 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 82 485 IPR001563 GO:0004185|GO:0006508
Pral5429g00045 512 FunFam Carboxypeptidase 77 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5429g00045 Pral-Chr5429 567582 571333 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5429g00045 367 501 Calmodulin-binding Proteins AT2G22960 31.618 9.12e-17 76.6