Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5429g00041 ATGGCAATAATGGAAAAAGAAACTTGGTGGGTCCTTTTCCTTCTATCAACACTACTACTGTTTGTGGATGAGATCCATGGAAGCAGAAAGCAAGAACAAGCTCTCAAGAACCTGAACAAGGCCAATTTCAAGGGAGGAGGTTCCATTGACAGAAGCAGTAACACAATCTTGGAGGTAGATGAGGCTGTGTTTGGGGACTCTGATGATAACAAGTCTCGTTACTATTATGTCCAAGAAGGATTGAAAGAGAAAGATAGGATTCAGAAACTTCCAGGGCAGCCTGAAGATGTGAGTATCTCTCAGTATGGAGGGTATGTCACTGTGGATAAGATTGCAGGAAGAGCTTTTTATTATTATTTTGTTGAAGCTCAACCATCTCATAGGCACAAATTGCCACTTCTTCTCTGGCTAAATGGAGGTCCTGGGTGCTCATCTCTAGGGTATGGAGCAATGCAAGAGTTAGGACCATTCCGAGTAAACAGTGATGGCAAGACACTTCAAACAAACAAATACGCATGGAACTATGCTGTAAACGTATTATTCTTAGAATCACCAGCAGGAGTGGGATTTTCATATTCAAATAAGACATCAGATTACGACAATAATGGGGACAGAAGGACTGCTACAGACAACTATGTGTTCGTAAGGAACTGGTTGGAGAGGTTTGCAGAGTACAAGAATTCTGATTTCTACATTGCTGGGGAGAGCTATGCTGGCCATTATATTCCTCAGCTTGCTCACACCATTGTCTGCCACAACAACCACCCTCACTCCTCCTTCCTCATCAACCTCAAAGGCATCCTGATAGGGAATGCAGTGATAAATGATGATACAGATAATAGAGGAAGATGGGATTTCCTAGCAAGCCATGCCATAATATCCGACAAAGCAGCGCATGCTGTTAGCAAATTATGTGATTTCTCAGAGGTTGCATCATCATCTGATGTGAACAATGAATGCAAAGCAGCATCAAATGAAATAGAGCAGGACATTGGTTCCATCAATATATACAACATCTATGCTCCTCAGTGCCAAGATTCTAATCTCACTTCCCTACCTAAGCCTCCTTCTAAAGTGGCAGACCCGTGTATTGACTATTATGTGGATGCATATATGAACCGGGTTGAGGTGCAAGAGGCATTACATGCCAATGTCACAAAATTGAGTCATAATTGGGGACTTTGTAGCGATGTCATCACCAAGTGGAATGATAGCGCTTCCACGGTGCTTCCTCTTTTAAGAGAATTTCTCAACCACAGGCTTCGCGTTTGGATCTTCAGTGGTGATTTTGATGGAATGGTGCCAGTTACTTCAACAAAGTATTCCATTGAGAAGTTAAATCTCACTCTTAAGACCATGTGGCGCCCTTGGTTCGTCAATGGAGAGGTAGGGGGGTACACAGAAACTTATAAGGGAGGCTTGACATTTGCAACGGTGAGAGGAGCCGGGCATGAAGTGCCAAGCTACCAGCCAGGAAGAGCCCTTTCTTTGGTCAATCACTTCTTAAAAGGCATCACTCTTCCTAATTCCACTACCTCCCCACATACCTGA 1551 0.4333 MAIMEKETWWVLFLLSTLLLFVDEIHGSRKQEQALKNLNKANFKGGGSIDRSSNTILEVDEAVFGDSDDNKSRYYYVQEGLKEKDRIQKLPGQPEDVSISQYGGYVTVDKIAGRAFYYYFVEAQPSHRHKLPLLLWLNGGPGCSSLGYGAMQELGPFRVNSDGKTLQTNKYAWNYAVNVLFLESPAGVGFSYSNKTSDYDNNGDRRTATDNYVFVRNWLERFAEYKNSDFYIAGESYAGHYIPQLAHTIVCHNNHPHSSFLINLKGILIGNAVINDDTDNRGRWDFLASHAIISDKAAHAVSKLCDFSEVASSSDVNNECKAASNEIEQDIGSINIYNIYAPQCQDSNLTSLPKPPSKVADPCIDYYVDAYMNRVEVQEALHANVTKLSHNWGLCSDVITKWNDSASTVLPLLREFLNHRLRVWIFSGDFDGMVPVTSTKYSIEKLNLTLKTMWRPWFVNGEVGGYTETYKGGLTFATVRGAGHEVPSYQPGRALSLVNHFLKGITLPNSTTSPHT 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5429g00041 516 PRINTS Carboxypeptidase C serine protease (S10) family signature 182 192 IPR001563 GO:0004185|GO:0006508
Pral5429g00041 516 PRINTS Carboxypeptidase C serine protease (S10) family signature 474 487 IPR001563 GO:0004185|GO:0006508
Pral5429g00041 516 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 181 IPR001563 GO:0004185|GO:0006508
Pral5429g00041 516 PRINTS Carboxypeptidase C serine protease (S10) family signature 218 243 IPR001563 GO:0004185|GO:0006508
Pral5429g00041 516 FunFam Carboxypeptidase 80 354 - -
Pral5429g00041 516 Gene3D - 409 504 - -
Pral5429g00041 516 Gene3D alpha/beta hydrolase 81 346 IPR029058 -
Pral5429g00041 516 Gene3D - 363 400 - -
Pral5429g00041 516 ProSitePatterns Serine carboxypeptidases, serine active site. 232 239 IPR018202 GO:0004185
Pral5429g00041 516 SUPERFAMILY alpha/beta-Hydrolases 83 507 IPR029058 -
Pral5429g00041 516 ProSitePatterns Serine carboxypeptidases, histidine active site. 474 491 IPR033124 GO:0004185
Pral5429g00041 516 FunFam Carboxypeptidase 409 504 - -
Pral5429g00041 516 Pfam Serine carboxypeptidase 91 504 IPR001563 GO:0004185|GO:0006508
Pral5429g00041 516 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 86 491 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5429g00041 Pral-Chr5429 539368 543660 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5429g00041 371 507 Calmodulin-binding Proteins AT2G22960 31.387 2.43e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5429g00041 K16297 - pcin:129316698 847.04