Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5429g00040 ATGGCAATAATGGGCAAAGAAACTTGGTGGGTCCTTTTCCTTCTATCAACACTACTACTCTTTGTGGATGAGATCCATGGAAGCAGAAAGCAAGAACAAGCTCTCAGGAATCTGAACAAGGCCAAGTTCAAGGTAGGAGGTTCCATTGACAGAAGTAGAAACACAATCTTGGAAGTAGATGAGGCTGTGTTTGGAGACTCTGATGATAATAAGTCTCGTTACTATTATCACCAAGAAGGATTGAAAGAGAAAGATAGGATTCAGAAACTTCCAGGGCAGCCTGAAGATGTGAGTATCTCTCAGTATGGAGGGTATGTCACTGTGGATAAGATTGCAGGAAGAGCTTTTTATTATTATTTTGTTGAAGCTCAACCATCTCATAGGCACAAACTGCCACTTCTTCTCTGGCTCAATGGAGGTCCTGGATGCTCATCTCTAGGGTACGGAGCAATGCAAGAGTTAGGACCATTCCGAGTAAACAGTGATGGCAAAACACTTCAAACAAACAAATATTCATGGAACTATGCTGCAAATGTATTATTCTTAGAATCACCAGCTGGAGTGGGATTTTCATATTCAAATAAGACATCAGATTACGACAGTAATGGGGACAGAAGGACTGCTACAGACAACTACGTGTTTTTAAGGAACTGGTTGGAGAGGTTTGGAGAGTACAAGAATTCTGATTTCTACATTGCTGGGGAGAGCTATGCCGGCCATTATGTTCCTCAGCTTGCTCACACCATTCTCCACCACAACAACCACCCTCACTCCTCCTTCCTCATCAACCTCAGAGGCATCCTGATAGGGAATGCAGTGATAAATGATGATACAGACAATAGAGGAAGATGGGATTTCCTAGCAAGCCATGCCATAATATCCGACATAGCAGCGCATGCTGTTAGCAAATTATGTGATTTCTCAGAGGTTGCATCATCATCATCATCAACTGATGATGATGATAAAAACAATGAATGTAAAGCAGCGTCAAACGAAATAGAGCAAGACACTGATTCCATCAATATATACAACATCTATGCTCCTCAATGCCAGGACTCTAATCTCACTTCCCTACCTAAGCCTCCTTCTAAAGTGGCAGACCCGTGTATTGATTATTATGTGGATGCATATATGAACCGGGTTGAGGTGCAAGAGGCATTACATGCCAATGTCACAAAGTTGACTCATGACTGGGGACTTTGTAGCGATGTCATCACCAAGTGGAATGATAGCCCTTCCACTGTGCTTCCTCTTTTAAGAGAATTTCTCAACCACAGCCTTCGCGTTTGGATCTTCAGTGGTGATTTTGATGGAATGGTGCCAGTTACTTCAACAAAGTATTCCATTGAGAAGTTAAATCTCACTCTTAAGACTATGTGGCGCCCTTGGTTCGTCAATGGAGAGGTAGGAGGGTACACAGAGACTTATAAGGGAGGCTTGACATTTGCAACGGTGAGAGGAGCAGGGCATGAAGTGCCAAGCTACCAGCCAGGAAGAGCCCTTTCTTTGGTCAATCACTTCATAAAAGGCATCACTCTTCCTAATTCCACTACCTCCCCACATACCTGA 1569 0.4315 MAIMGKETWWVLFLLSTLLLFVDEIHGSRKQEQALRNLNKAKFKVGGSIDRSRNTILEVDEAVFGDSDDNKSRYYYHQEGLKEKDRIQKLPGQPEDVSISQYGGYVTVDKIAGRAFYYYFVEAQPSHRHKLPLLLWLNGGPGCSSLGYGAMQELGPFRVNSDGKTLQTNKYSWNYAANVLFLESPAGVGFSYSNKTSDYDSNGDRRTATDNYVFLRNWLERFGEYKNSDFYIAGESYAGHYVPQLAHTILHHNNHPHSSFLINLRGILIGNAVINDDTDNRGRWDFLASHAIISDIAAHAVSKLCDFSEVASSSSSTDDDDKNNECKAASNEIEQDTDSINIYNIYAPQCQDSNLTSLPKPPSKVADPCIDYYVDAYMNRVEVQEALHANVTKLTHDWGLCSDVITKWNDSPSTVLPLLREFLNHSLRVWIFSGDFDGMVPVTSTKYSIEKLNLTLKTMWRPWFVNGEVGGYTETYKGGLTFATVRGAGHEVPSYQPGRALSLVNHFIKGITLPNSTTSPHT 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5429g00040 522 Gene3D - 369 406 - -
Pral5429g00040 522 FunFam Carboxypeptidase 80 360 - -
Pral5429g00040 522 FunFam Carboxypeptidase 415 510 - -
Pral5429g00040 522 ProSitePatterns Serine carboxypeptidases, serine active site. 232 239 IPR018202 GO:0004185
Pral5429g00040 522 PRINTS Carboxypeptidase C serine protease (S10) family signature 182 192 IPR001563 GO:0004185|GO:0006508
Pral5429g00040 522 PRINTS Carboxypeptidase C serine protease (S10) family signature 218 243 IPR001563 GO:0004185|GO:0006508
Pral5429g00040 522 PRINTS Carboxypeptidase C serine protease (S10) family signature 480 493 IPR001563 GO:0004185|GO:0006508
Pral5429g00040 522 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 181 IPR001563 GO:0004185|GO:0006508
Pral5429g00040 522 Gene3D - 415 510 - -
Pral5429g00040 522 ProSitePatterns Serine carboxypeptidases, histidine active site. 480 497 IPR033124 GO:0004185
Pral5429g00040 522 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 86 497 IPR001563 GO:0004185|GO:0006508
Pral5429g00040 522 SUPERFAMILY alpha/beta-Hydrolases 87 513 IPR029058 -
Pral5429g00040 522 Pfam Serine carboxypeptidase 91 510 IPR001563 GO:0004185|GO:0006508
Pral5429g00040 522 Gene3D alpha/beta hydrolase 81 352 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5429g00040 Pral-Chr5429 510901 515402 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5429g00040 377 513 Calmodulin-binding Proteins AT2G22960 32.117 2.64e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5429g00040 K16297 - pcin:129316698 851.662