Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5428g00017 ATGCCTTTCAACATCATAATTTTGTTACTCTGCTTCATCGGCTTCCTCCATTCTTCTTCTGCTCAAGTCATAGGTCGTAATTCTCTTCACCCTCAATGCTCCACCCACCACAATTTCACCGCCAATAGCACCTTCGACTTTAACCTCAACACCCTCTTTTCTTCCTTAACTTCCAACGAAACCGCCCACCTCGACTTCTACAACACCACCGTTGACGGCGGTGGCGAGACCATATACGGCCTCTTCATGTGCCGGGGCGACGTCAACCAAGACGCATGCCACCAGTGCGTCGTTGAGTCAACTGCAGAGTTAGCTTACTATTGCAGATTTTCGAAGGCGGCTGTAAACTGGCTTGACCCGTGCTTGGTTCGCTATTCTCAGCACAACTTCTTCTCCACCGTCGATAGAAAGCCTAAACTCAAAATGTTGAACACTAACAATGTCTCGAACCAGGCAGGATTCATGAACGTATTGATGACTGTTATGAACCTGACGGCAGATGAAGCGGCGAAGCCTGCTTTGATGAAAAAGAAGTCGGCGACGAAAGCGGTGGTGGTAGATATTCAAACTCTGTATGTGATGGTTCAGTGCACGCCGGACCTTTCGCCGGGAGATTGCAGAACGTGTCTGAGTGGTGTGATCGGGAACCTTCCATGGTGTTGTGAGGGCAAGATCGGAGGAAGAGTGGCATATCCAAGTTGCTTCGCTCGCTATGAGCTGTATATGTTCTTTAATTCTTCTACGCCTCTCCGGCCAGTAAGGCTGCCCCCTCCGCCTCCGCCTCCTCCTCCTCCTCCGGCTCCATTAACTCCTCCAACTCCTTCAGATGTAAGAAGGAAAAGGAGATTAAGGACTATTGTGATAGCTGTGGCTTCTCCTGTTGGTGCTGTGATACTTCTATGTTTCTCCTTCTATTTGTCGAAGAATCAAATAAAGAAGATACGTATGGCTTTTCTCATGCAAAAATACTTTGGAAGCGAAAGCAACACTTTAGAGCCTCTGCAATTCAGTTTGGCTACGATTGAAGCCGCGACAAATAAGTTTTCACAGGAAAATTGTTTAGGTCAGGGTGGATTTGGACAAGTTTACAAGGGCATTCTTTCAAATGGTCAAGAAATAGCTGTAAAAAGACTTTCAAAAAGTTCTGGCCAGGGAGTAGAAGAATTTAAGAACGAGGTTTTATTAATAGCCAGACTCCAGCATAGAAATTTGGTGGCCTTGCTAGGATTTTGCATAGAAGAGCAAGAGAAAATTCTCATTTATGAATATGTTCCCAACAAAAGTCTTGATTATTTTCTATTTGGTTCTCAAAAAATCAAAGTACTAAATTGGGAGGAGCGATGTAAAATTATAGGAGGAGTTGCTCGAGGAATTCTTTACCTTCATGATTATGCTCGAGTTAAGATTATACATCGTGATCTCAAGCCAAGCAATATTTTGTTAGATAATGAAATGAACCCAAAAATTTCAGATTTTGGCATGGCCAGGATGGTTGGAATCCATGAAATTGAGGAAAGTACAAGTAACATTGTTGGAACCTATGGTTATATGTCTCCGGAATATGCAATGTTTGGACAATATTCTGAAAAATCAGATGTTTTTAGCTTTGGAGTAATAGTATTAGAAATGATCAGTGGAAGGAAGATCACAAGCTCTCAAGATCAATCTCATGGCCTCCTAAACTATGCTTGGAATCAATGGAACGAAGAAAAGATATTAGATGTATTGGATTCAAGTCTAAATGAACCTGAATTGTTGAATGAAGTGGACAAGTGCATCCAAATTGGGTTGCTATGTGTTCAAGAAAATCCGGAAGCAAGGCCTTCTATGGCTACAGTTGTTTCATATCTTAGCAATGATTCAATTCAATTGCCATTTCCACAAGAACCTGCATTCTTTCTGGAGGGCCAAATGGAGCTTAATACCGACAGTAAAGAATCAATTAATGAAATGTCTATAAGTGAATTCTATCCTCGGTAG 1980 0.4237 MPFNIIILLLCFIGFLHSSSAQVIGRNSLHPQCSTHHNFTANSTFDFNLNTLFSSLTSNETAHLDFYNTTVDGGGETIYGLFMCRGDVNQDACHQCVVESTAELAYYCRFSKAAVNWLDPCLVRYSQHNFFSTVDRKPKLKMLNTNNVSNQAGFMNVLMTVMNLTADEAAKPALMKKKSATKAVVVDIQTLYVMVQCTPDLSPGDCRTCLSGVIGNLPWCCEGKIGGRVAYPSCFARYELYMFFNSSTPLRPVRLPPPPPPPPPPPAPLTPPTPSDVRRKRRLRTIVIAVASPVGAVILLCFSFYLSKNQIKKIRMAFLMQKYFGSESNTLEPLQFSLATIEAATNKFSQENCLGQGGFGQVYKGILSNGQEIAVKRLSKSSGQGVEEFKNEVLLIARLQHRNLVALLGFCIEEQEKILIYEYVPNKSLDYFLFGSQKIKVLNWEERCKIIGGVARGILYLHDYARVKIIHRDLKPSNILLDNEMNPKISDFGMARMVGIHEIEESTSNIVGTYGYMSPEYAMFGQYSEKSDVFSFGVIVLEMISGRKITSSQDQSHGLLNYAWNQWNEEKILDVLDSSLNEPELLNEVDKCIQIGLLCVQENPEARPSMATVVSYLSNDSIQLPFPQEPAFFLEGQMELNTDSKESINEMSISEFYPR 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5428g00017 659 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 26 130 - -
Pral5428g00017 659 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 424 625 - -
Pral5428g00017 659 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Pral5428g00017 659 Pfam Protein kinase domain 349 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5428g00017 659 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 310 423 - -
Pral5428g00017 659 MobiDBLite consensus disorder prediction 253 273 - -
Pral5428g00017 659 MobiDBLite consensus disorder prediction 253 276 - -
Pral5428g00017 659 SUPERFAMILY Protein kinase-like (PK-like) 331 638 IPR011009 -
Pral5428g00017 659 Gene3D - 26 130 IPR038408 -
Pral5428g00017 659 Gene3D - 137 243 IPR038408 -
Pral5428g00017 659 CDD STKc_IRAK 354 617 - -
Pral5428g00017 659 SMART serkin_6 348 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5428g00017 659 ProSiteProfiles Gnk2-homologous domain profile. 136 243 IPR002902 -
Pral5428g00017 659 Gene3D Transferase(Phosphotransferase) domain 1 424 624 - -
Pral5428g00017 659 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 27 655 - -
Pral5428g00017 659 Gene3D Phosphorylase Kinase; domain 1 309 423 - -
Pral5428g00017 659 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Pral5428g00017 659 FunFam Cysteine-rich receptor-like protein kinase 25 138 243 - -
Pral5428g00017 659 SUPERFAMILY Formin homology 2 domain (FH2 domain) 256 266 - -
Pral5428g00017 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Pral5428g00017 659 Pfam Salt stress response/antifungal 33 127 IPR002902 -
Pral5428g00017 659 Pfam Salt stress response/antifungal 147 241 IPR002902 -
Pral5428g00017 659 ProSiteProfiles Protein kinase domain profile. 348 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5428g00017 Pral-Chr5428 215824 219698 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5428g00017 29 659 Receptor kinase-like Gene Family AT4G05200 43.425 2.30e-179 524
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5428g00017 Pkinase 2.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5428g00017 - - pcin:129286093 1029.62