Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5428g00016 ATGGATATGCCATTTCTGAAACTGCTATTCTATCATCTCCTTCTCACCTCCTTCAATCTCGCTTCTTCTGAAGTAGACATCCCGGCTTACTATGATCACAACTGCACCATTAATAAAAACTTCACTTCCAATAGCCCCTACCAGTTCAACCTCAACACTCTTTTGGCTTCCTTGTACACCACGGCCACTGGCGCTGGCTCTAAAGCGAATCCTGAATTCTTCAACACCACTGTTGGCAGCCCAAACACGAACGAAACTGTATATGGAGAGTACATGTGCCGAGGAGACGTCCCAAGTCAGGTCTGTCGAGACTGCGTCCAGGACGCCGCAAGCAGAATAGTCTCAGAGTGTCCCCACAATAAAGAGGCAATCATCTGGTACGACCAGTGCTTCCTCCGCTATTCCCATCGTTCTTTCTTCTCCACCCTCTACCAACAGCCTACAGTTAACGGGATGGAATCTGAAAACAGAAGCCGGATGGGATCTGAAAACAGAAGCTGGATGCAATCTGAAAGCCAAGGCGGGACGCATGGCATGGTGGGAAACGGACACGGTCCTGGAAACTCAGACGATGCAAACTCATATGAAGAATTCAACACGATGTTGAATGAAACAGCGGTGGAGGCAGCTACATCATCAGGTACCAAGAAATTTTCAACCAAAGAAGCAAACCTCAGTAGTTGGGGATCCGTGTATACTCTTGTCCAGTGCACACCGGATCTGCCTTCACAACTCTGTAGTGAGTGTCTCCATGGCATGATCGAACTTATTCCAACCCCGCACAGTGGAATGCGGGGAAGAATTCTGAATCCGAGCTGCAATTTGAGACTCGACACAGAGCGATTTTATTATAAGGGCAACCAGCCTCCCTCTGATGTTTCTTCCACTCAAGCGCTTGGGAGTCCTACTCTTACAGATTGGGACTGCTCACCCACCGACACCTGGAGTGCTAAAGATCCCTACCCAAACAACCTCAAAAGTCTCACCCGCCAACTCTTCAAGTTGTCCAACAACACCAAAAACAATGGATTCTACAAAATTAGCATCGGAAACAAGTCCGACACCGTCTACGGCCTCTTCATGTGTCGAGGTGATGTGCCCCTTAAGCTCTGCAATGAATGCATCGTGGAAGGAATCGTGAAACTAAACGACACATGTCCCTCTTCTAAGGAGGCTATCATTTGGTATGATAAGTGCATGCTTCGCTATTCCAATCGCTCTTTCTTCTCTACCCTAGACACACAACCTATATATGCAGTAACTGGTGGGTATACGCTTGGAACCCAAACAGAGGGCTTCAATCGGCTATTAGCGAATACACTAAACAGTTTAGTGGCGGCGACGTTGAACTCATCACCGCATGCAGGAGTGAAAAATTTTGCAACAAAAACAGAATTCAGCTCTTCAGAATTGACAACGTTGTACACTCTTGCACAATGTACTCCGATCCTGTCCAGCCAAGATTGTGAAAAATGTCTAGGGGTTGCTCTGCAAAATATCACGTCATGTTGTCTCGAAAGGAAAGGAGGACAAGTCATGAATCCTAGCTGCAACTTGAGGTTTGAATCGTACCGATTTTATAATGACAGTAAGAGTGATGCTTCGGTTCCACCTGCGTATCCCCCAAATACTAGTGTTGGAAGCGAAGGAGCCACATTAGAGTCATTGCAGTTCAATTTGGCAACAATTGAAGCTGCAACAGATAAGTTCTCGATTGAAAATAGAATAGGCAAAGGTGGATTTGGAGAAGTCTACATGGGCATTCTTCCTGACGGTAGCAAAATAGCAGTAAAGAGATTGTCAGAAAATTCTAGTCAGGGATTATTAGAATTCAAGAATGAGGTTCTACTAATTGCCAGACTTCAACATAGAAACCTGGTGGCATTATTAGGATTTTGCTTAAAAGATCAAGAGAAAATACTTATTTATGAATATGTTCCCAACAAGAGCCTTGATTACTTTTTATTTGGTTCACAGAAGTCAAGAGTGTTAAATTGGTTGGAGCGTTATAAAATTATAGAAGGAATTGCTCGAGGAATTCTTTATCTCCATGAACATTCACGTCTAAAAGTAATACATCGAGATCTCAAACCTAGCAATATTTTGCTAGATGATGAAATGAATCCAAAAATTTCTGACTTTGGCATGGCAAGAATGGTTGGTATTAATGAAACTAGAGGAAACACAAATAGAATTGTTGGAACATTGGGCTACATGTCTCCAGAATACATTAAGTTTGGACTATTTTCTGAGAAATCAGATGTTTACAGTTTTGGAGTCATTGTTTTAGAAATTGTAAGTGGAAAGAATATACACTCTCAATGTGAATCTCATGAATCTCAATATACTGGCGGACTCTTAAGTGATGCTTGGAAGCATTGGAGGGATGAAAGATTGACAGCTATATTGGATTCGAATCTGACAGAAGCTGGGTCACATGGTGAAATAATCAAATGCATCCATATCGGCTTGTTGTGTGTCCAGGGAAATCCGGGAGCAAGGCCTTCCATGAATAAAGTTGTTCAATATCTGAATAATGATTCAATGCAATTGCCAATTCCTCAAGAACCAGCATTCTTCATCCACAGTCAAATGGAACCAGCAGCAACCAGTAGAGAAATGGAGGCTCGACTTGGCAACCACAATCAATATTCCATCAACGAAATGTCAGAGAGTATAATATCTCCTCGCTAG 2694 0.431 MDMPFLKLLFYHLLLTSFNLASSEVDIPAYYDHNCTINKNFTSNSPYQFNLNTLLASLYTTATGAGSKANPEFFNTTVGSPNTNETVYGEYMCRGDVPSQVCRDCVQDAASRIVSECPHNKEAIIWYDQCFLRYSHRSFFSTLYQQPTVNGMESENRSRMGSENRSWMQSESQGGTHGMVGNGHGPGNSDDANSYEEFNTMLNETAVEAATSSGTKKFSTKEANLSSWGSVYTLVQCTPDLPSQLCSECLHGMIELIPTPHSGMRGRILNPSCNLRLDTERFYYKGNQPPSDVSSTQALGSPTLTDWDCSPTDTWSAKDPYPNNLKSLTRQLFKLSNNTKNNGFYKISIGNKSDTVYGLFMCRGDVPLKLCNECIVEGIVKLNDTCPSSKEAIIWYDKCMLRYSNRSFFSTLDTQPIYAVTGGYTLGTQTEGFNRLLANTLNSLVAATLNSSPHAGVKNFATKTEFSSSELTTLYTLAQCTPILSSQDCEKCLGVALQNITSCCLERKGGQVMNPSCNLRFESYRFYNDSKSDASVPPAYPPNTSVGSEGATLESLQFNLATIEAATDKFSIENRIGKGGFGEVYMGILPDGSKIAVKRLSENSSQGLLEFKNEVLLIARLQHRNLVALLGFCLKDQEKILIYEYVPNKSLDYFLFGSQKSRVLNWLERYKIIEGIARGILYLHEHSRLKVIHRDLKPSNILLDDEMNPKISDFGMARMVGINETRGNTNRIVGTLGYMSPEYIKFGLFSEKSDVYSFGVIVLEIVSGKNIHSQCESHESQYTGGLLSDAWKHWRDERLTAILDSNLTEAGSHGEIIKCIHIGLLCVQGNPGARPSMNKVVQYLNNDSMQLPIPQEPAFFIHSQMEPAATSREMEARLGNHNQYSINEMSESIISPR 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5428g00016 897 ProSitePatterns Protein kinases ATP-binding region signature. 576 598 IPR017441 GO:0005524
Pral5428g00016 897 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 23 897 - -
Pral5428g00016 897 ProSiteProfiles Gnk2-homologous domain profile. 177 282 IPR002902 -
Pral5428g00016 897 CDD STKc_IRAK 576 846 - -
Pral5428g00016 897 ProSiteProfiles Gnk2-homologous domain profile. 414 526 IPR002902 -
Pral5428g00016 897 ProSitePatterns Serine/Threonine protein kinases active-site signature. 691 703 IPR008271 GO:0004672|GO:0006468
Pral5428g00016 897 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 28 139 - -
Pral5428g00016 897 FunFam cysteine-rich receptor-like protein kinase 10 646 851 - -
Pral5428g00016 897 SUPERFAMILY Protein kinase-like (PK-like) 555 870 IPR011009 -
Pral5428g00016 897 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 538 645 - -
Pral5428g00016 897 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 302 408 - -
Pral5428g00016 897 Pfam Protein kinase domain 571 841 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5428g00016 897 Pfam Salt stress response/antifungal 428 524 IPR002902 -
Pral5428g00016 897 Pfam Salt stress response/antifungal 314 405 IPR002902 -
Pral5428g00016 897 Pfam Salt stress response/antifungal 194 279 IPR002902 -
Pral5428g00016 897 Pfam Salt stress response/antifungal 35 136 IPR002902 -
Pral5428g00016 897 ProSiteProfiles Gnk2-homologous domain profile. 303 408 IPR002902 -
Pral5428g00016 897 ProSiteProfiles Protein kinase domain profile. 570 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5428g00016 897 MobiDBLite consensus disorder prediction 151 192 - -
Pral5428g00016 897 MobiDBLite consensus disorder prediction 151 177 - -
Pral5428g00016 897 ProSiteProfiles Gnk2-homologous domain profile. 29 139 IPR002902 -
Pral5428g00016 897 SMART serkin_6 570 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5428g00016 897 Gene3D Transferase(Phosphotransferase) domain 1 646 853 - -
Pral5428g00016 897 Gene3D - 303 408 IPR038408 -
Pral5428g00016 897 Gene3D - 29 139 IPR038408 -
Pral5428g00016 897 Gene3D - 420 526 IPR038408 -
Pral5428g00016 897 Gene3D - 183 282 IPR038408 -
Pral5428g00016 897 Gene3D Phosphorylase Kinase; domain 1 543 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5428g00016 Pral-Chr5428 203581 207885 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5428g00016 302 897 Receptor kinase-like Gene Family AT4G05200 41.405 3.98e-160 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5428g00016 Pkinase 2.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5428g00016 - - pcin:129286968 840.491