Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5428g00014 ATGGTTCTGTATCCACGCTGCAGTCTCATGTTTGGGTTGCGACTCTTTTACAGAGAGGTTGAGGTTGTTCACGCGCGTTCGCCTGAGCGTGTCTCACATGATTCTGTTCCTGTTGATGGCGGTAAAGAGGGCTCAGCGCCAGAAGCTGCAACAAACAGGTCTTCAGTTCAGAACAGGATAGGTCAAGGAGGATTTGGAGAAGTTTACAAGGGTACTCTTTCTAATGGACAGAAAATTGCTGTGAAGAGACTCTTCACGAGCTCTGAGCAAGGCACCCTGGAATTTAAGAATGAGATTTTACTAATAGCTAAACTTCAACATAGAAATCTAGTGACATTAAGTGATAAAGTGCATCCAGATTGGATTATTGTGTGTGCTCAAGAGAAAGCAGAGGATACGCCTCCCATGTCAAGAGTTGTTCCATATTTAAGTAATCTTTGTGTGGAATTACCATTTCCTCGCAAACCCGCATTTTATGTCCATGGTAGGATGGACCCAAATTCGGGTCATCATTCTGCTTCTGCCAACAATTCCATTCCATCTTCTGTCAATGAAATATCTATGACACCATCTTTTCCTCGTTAG 585 0.4325 MVLYPRCSLMFGLRLFYREVEVVHARSPERVSHDSVPVDGGKEGSAPEAATNRSSVQNRIGQGGFGEVYKGTLSNGQKIAVKRLFTSSEQGTLEFKNEILLIAKLQHRNLVTLSDKVHPDWIIVCAQEKAEDTPPMSRVVPYLSNLCVELPFPRKPAFYVHGRMDPNSGHHSASANNSIPSSVNEISMTPSFPR 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5428g00014 194 Pfam Protein kinase domain 57 121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5428g00014 194 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 48 113 - -
Pral5428g00014 194 Gene3D Phosphorylase Kinase; domain 1 45 115 - -
Pral5428g00014 194 SUPERFAMILY Protein kinase-like (PK-like) 46 125 IPR011009 -
Pral5428g00014 194 MobiDBLite consensus disorder prediction 29 54 - -
Pral5428g00014 194 MobiDBLite consensus disorder prediction 169 194 - -
Pral5428g00014 194 ProSiteProfiles Protein kinase domain profile. 54 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5428g00014 194 ProSitePatterns Protein kinases ATP-binding region signature. 60 82 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5428g00014 Pral-Chr5428 178314 180977 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5428g00014 48 113 Receptor kinase-like Gene Family AT4G11460 72.727 1.98e-25 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5428g00014 Pkinase 6.6e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5428g00014 - - pcin:129286986 125.176