Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5428g00013 ATGACCTTCAACATTATAATTTTGTCACTCTTCTTCTTCATCGGCTTCCTCCTCAATTCTTCTTCTGCTCAATTCATAGGTCGTAATGAGTTTTACGCTCACTGCTCCACCCGCAGTAATTTCACTGCCAATAGTACCTTCGACTCTAACCTCCAAACTCTATTTTCTTCCTTCACTTCCAACAAAACCGCCAACCTCGACTTCTACAACACCACCGTTGGCCACGGCAGCGAGACCATATACGGCCTCTTCATGTGCCGGGGTGACGTCAACCAAGACATATGCCGCCAGTGCGTAGCTGACTCAACCCTAGATATAGGTTCCGTATGCCGATTTTCGAAGGAGGCCGTAGACTGGCGCCATCCGTGCTTGGTTCGCTATTCCGATCGCAACTTCTTCTCCACCGTCACTACAATGCCTACACTCCGATTGTTGAACCCTGCCAATTTCTCGAATCAGGCAGGATTCATGAACGTATTGACGTTTATTATGAACCAGTCGGCGGATGAGGCTTCCAAGTCTGCTGAGATGAAGAAGTTTAAGACGAATGCGGTGGCGGTACAGTTTCAAACTCTGTACGTTCTGGTTCAGTGCACGCCTGACCTTTCGTCGGCCGATTGCAGAAGGTGTCTGAGCGGAGTGATTGGGCACTTTAGATGGTGTTGTGATGGGAAGATCGGAGGAAAAGTGCTATATCCAAGCTGCCTCGCTCATTATGAGTTGTATCCGTTCTTTAATTCTTCAACGCCTCTTCTGCCAGTAACGCTGCCGCCTCCTCCGGCTCTACTTTCTCCTCCAAATCCTGTTGTGGTTGCTTCTGTTGGTGTTTTGGGGATATTTATTCGTCTCGCCTGCTATCTCTTAAATAGTCTAATAAAGAAGAGACGCAACGCCGTTCTCAGACAAAAATACTTTGGAAATGAAAGCAACAACTTAGAACCTTTGCAATTTAGTTTGGTCACTATTGAAGCTGCAACAAATAATTTTTCAGATGAGAAGTGTTTATTAGGACGAGGTGGATTTGGAAGAGTTTACAAGGGCATTCTTTCAAACGGCCAAGAAATAGCTGTCAAGAGACTTTCAAAATGTTCAGGTCAAGGCGCAGAAGAATTCAAGAACGAGATTTTATTAATTGCCAAACTCCAGCACAGAAATTTGGTAGCTTTGCTTGGATATTGCATAGAAGAACAAGAGAAAATTCTTATCTATGAATATGTTCCGAACAGAAGCCTTGATTACTTTCTATTTGGTTCCACAGAAGGAAAAGTATTAAGTTGGATGGAGCGTTGTAAAATTATTGGAGGAGTAGCTCGAGGAATTCTTTATCTCCATGATTATTCCCGTCTTAAAATTATACATCGTGATTTAAAGCCAAGCAATATTTTATTAGATGATGAAATGAATCCAAAAATTTCTGATTTTGGATTGGCTAAAATGGTTGCCATCAACTCACAAGAGGGAAGTACAAATAGAATTGTTGGAACGTATAGTTATATGTCTCCAGAATATGCGATGTATGGACAATATTCTGAAAAATCAGATGTTTTTAGTTTTGGAGTTATAATTTTAGAAATCACTACTAGAAAGAAGAACACAAGCCGTCAAAATGAATCACAATATGTTGATGGCCTATTGAGCTATGCTTGGAAGCAATGGAAAGAGGAAAAGTTGCTGGAGATATTAGATTTAAATATAAAAGAATTTGCGTCATATAATGAAGTGATCAGATGCATTCATATTGGTTTGTTATGTGTTCAAGAAAATCCAGATTCAAGACCCACAATGGCAACGGTTGTTTCATATCTTAGTAATGATTCCATTCAACTGCCATTGCCACGGGAACCTGCATTCTTTCTGCACGATGGAATGAAGCCCAATACCAGTGGAAGTAAGGAATCAGGCTCCATTGTTGAAGTGTCTATGAGTGAATTCTATCCTCGTTAG 1944 0.4131 MTFNIIILSLFFFIGFLLNSSSAQFIGRNEFYAHCSTRSNFTANSTFDSNLQTLFSSFTSNKTANLDFYNTTVGHGSETIYGLFMCRGDVNQDICRQCVADSTLDIGSVCRFSKEAVDWRHPCLVRYSDRNFFSTVTTMPTLRLLNPANFSNQAGFMNVLTFIMNQSADEASKSAEMKKFKTNAVAVQFQTLYVLVQCTPDLSSADCRRCLSGVIGHFRWCCDGKIGGKVLYPSCLAHYELYPFFNSSTPLLPVTLPPPPALLSPPNPVVVASVGVLGIFIRLACYLLNSLIKKRRNAVLRQKYFGNESNNLEPLQFSLVTIEAATNNFSDEKCLLGRGGFGRVYKGILSNGQEIAVKRLSKCSGQGAEEFKNEILLIAKLQHRNLVALLGYCIEEQEKILIYEYVPNRSLDYFLFGSTEGKVLSWMERCKIIGGVARGILYLHDYSRLKIIHRDLKPSNILLDDEMNPKISDFGLAKMVAINSQEGSTNRIVGTYSYMSPEYAMYGQYSEKSDVFSFGVIILEITTRKKNTSRQNESQYVDGLLSYAWKQWKEEKLLEILDLNIKEFASYNEVIRCIHIGLLCVQENPDSRPTMATVVSYLSNDSIQLPLPREPAFFLHDGMKPNTSGSKESGSIVEVSMSEFYPR 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5428g00013 647 ProSiteProfiles Gnk2-homologous domain profile. 138 244 IPR002902 -
Pral5428g00013 647 SUPERFAMILY Protein kinase-like (PK-like) 312 621 IPR011009 -
Pral5428g00013 647 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 29 132 - -
Pral5428g00013 647 FunFam Cysteine-rich receptor-like protein kinase 25 140 244 - -
Pral5428g00013 647 ProSiteProfiles Protein kinase domain profile. 330 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5428g00013 647 FunFam cysteine-rich receptor-like protein kinase 10 406 609 - -
Pral5428g00013 647 Gene3D Phosphorylase Kinase; domain 1 290 405 - -
Pral5428g00013 647 SMART serkin_6 330 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5428g00013 647 Pfam Protein kinase domain 335 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5428g00013 647 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 293 405 - -
Pral5428g00013 647 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 34 632 - -
Pral5428g00013 647 ProSiteProfiles Gnk2-homologous domain profile. 29 132 IPR002902 -
Pral5428g00013 647 Pfam Salt stress response/antifungal 35 129 IPR002902 -
Pral5428g00013 647 Pfam Salt stress response/antifungal 149 242 IPR002902 -
Pral5428g00013 647 Gene3D - 28 132 IPR038408 -
Pral5428g00013 647 Gene3D - 139 244 IPR038408 -
Pral5428g00013 647 CDD STKc_IRAK 336 602 - -
Pral5428g00013 647 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Pral5428g00013 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Pral5428g00013 647 Gene3D Transferase(Phosphotransferase) domain 1 406 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5428g00013 Pral-Chr5428 171166 175338 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5428g00013 4 647 Receptor kinase-like Gene Family AT4G05200 42.584 4.34e-175 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5428g00013 Pkinase 5.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5428g00013 - - pcin:129286093 777.704