Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5428g00011 TTCGGCTTCTGTTACTGGAAGATTAAGAAGAGCAAGACTTATAAGGAGATTTTGAAGAAAAACTTTGGAAGCGAAGGAGCCACATTAGAGTCATTGCAGTTCAATTTGGCAACAATTGAAGCTGCAACAGATAAGTTCTCGATTGAAAATAGAATAGGCAAAGGTGGATTTGGAGAAGTCTACATGGGCATTCTTCCTGACGGTTGCAAAATAGCAGTAAAGAGATTGTCAGAAAATTCTAGTCAGGGATTATTAGAATTCAAGAATGAGGTTCTACTAATTGCCAGACTTCAACATAGAAACCTGGTGGCATTATTAGGATTTTGCTTAAAAGATCAAGAGAAAATACTTATTTATGAATACGTTCCCAACAAGAGCCTTGATTACTTTTTATTTGGTTCACAAAAGTCAAGAGTGTTAAATTGGTTGGAGCGTTATAAAATTATAGAAGGAATTGCTCGAGGAATTCTTTATCTCCATGAACATTCACGTCTAAAAGTAATACATCGAGATCTCAAACCTAGCAATATTTTGCTAGATGATGAAATGAATCCAAAAATTTCTGACTTTGGCATGGCAAGAATGGTTGGTATTAATGAAACTAGAGGAAACACAAATAGAATTGTTGGAACATTGGGCTACATGTCTCCAGAATACATTAAGTTTGGACTATTTTCTGAGAAATCAGATGTTTACAGTTTTGGAGTCATTGTCTTAGAAATTATAAGTGGAAAGAATATACACTCGCAATGTGAATCTCATGAATCTCAATATACTGGCAGACTCTTAAGTGATGCTTGGAAGCATTGGAGGGATGAAAGATTGACAGCTATATTGGATTCGAATCTGACAGAAGCTGGGTCACATGGTGAAATAATCAAATGCATCCATATCGGCTTGTTGTGTGTCCAGGGAAATCCGGGAGCAAGGCCTTCCATGAATAAAGTTATTCAATATCTGAATAATGATTCAATGCAATTGCCAATTCCTCAAGAACCAGCATTCTTCATCCACAGTCAAATGGAACCAGCAGCAACCAGTAGAGAAATGGAGGCTCCACCTGGCAACCACAATCAATATTCCATCAACAAAATGTCAGAGAGTATAATATCTCCTCGCTAG 1122 0.3699 FGFCYWKIKKSKTYKEILKKNFGSEGATLESLQFNLATIEAATDKFSIENRIGKGGFGEVYMGILPDGCKIAVKRLSENSSQGLLEFKNEVLLIARLQHRNLVALLGFCLKDQEKILIYEYVPNKSLDYFLFGSQKSRVLNWLERYKIIEGIARGILYLHEHSRLKVIHRDLKPSNILLDDEMNPKISDFGMARMVGINETRGNTNRIVGTLGYMSPEYIKFGLFSEKSDVYSFGVIVLEIISGKNIHSQCESHESQYTGRLLSDAWKHWRDERLTAILDSNLTEAGSHGEIIKCIHIGLLCVQGNPGARPSMNKVIQYLNNDSMQLPIPQEPAFFIHSQMEPAATSREMEAPPGNHNQYSINKMSESIISPR 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5428g00011 373 Gene3D Transferase(Phosphotransferase) domain 1 122 329 - -
Pral5428g00011 373 SMART serkin_6 46 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5428g00011 373 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 3 372 - -
Pral5428g00011 373 FunFam cysteine-rich receptor-like protein kinase 10 122 327 - -
Pral5428g00011 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Pral5428g00011 373 Pfam Protein kinase domain 47 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5428g00011 373 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Pral5428g00011 373 MobiDBLite consensus disorder prediction 352 373 - -
Pral5428g00011 373 SUPERFAMILY Protein kinase-like (PK-like) 30 348 IPR011009 -
Pral5428g00011 373 ProSiteProfiles Protein kinase domain profile. 46 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5428g00011 373 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 7 121 - -
Pral5428g00011 373 Gene3D Phosphorylase Kinase; domain 1 7 121 - -
Pral5428g00011 373 CDD STKc_IRAK 52 322 - -
Pral5428g00011 373 MobiDBLite consensus disorder prediction 348 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5428g00011 Pral-Chr5428 123317 125203 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5428g00011 8 373 Receptor kinase-like Gene Family AT4G11480 50.272 1.59e-129 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5428g00011 Pkinase 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5428g00011 - - pcin:129286968 556.214