Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5428g00002 ATGGCTTCAATGGTGATAATGGCTTCCTACAAGATTATCCCACTCTTGTTCTTTATCACCTTCCTCTCTTCTGCAACCTCTGATGATGAATCCCAACCTACTTTTCTTTCCCATGCGTGCTCTTCCGACAAAACCTTCCCTGCCAATAGTGCCTTCCAAGCCGACCTCACCACCCTCCTCTCTTCCTTAGCTTCCGACAACACCGCCAACACTGACTTCTACAACACCACCGTTGCTGGCGGAGGCGAAACTGCATATGGCCTCTTCATGTGCCGCGGCGACGTCACCCTCGAGGTGTGCCACCAATGCGTGGTCGAGGCAACCAAAAGATTGACTTCAGATTGCCAGTTCTCGAAGGAGGCCATAATCTGGTACGACGAGTGCACGCTTCGCTATTCCAACACCTCCTTCTCCACCGTCGACACAAGGCCAAGACTCGGCCTCTTGAACACTGGAAATATCGCCAACCCTGCAAGCTTCATGAGGTTATTGTTCACTACTATGAACGAGACGGCAGATTTGGCAGCAAAACCTGCCTTGGGTAAAAAGAAGTATGCGACGAAGGAAGCGTTTATTTCGGGGTTTCAAACTCTGTATTGTCTAGCCCACTGCACGCCGGACCTTTCGCCGGAAGATTGCAGAATGTGCCTGAGCGGCGTGATTGGGGACCTTAACTGGTGTTGCGATGGCAAGCAAGGTGGAAGGGTTCTATACCCTAGCTGTAATGTTCGCTATGAACTGTACCCATTCTATCAAACACAAGATTCAGCAATTCCACCAAACGATTTTACAGGGATTATTGGGCGTGTTACATCGGACAAGTGTAGGACAGAGATTAACATGATTAACATTCTATTAAGTTTGAATTACACACATCATAAGAACTGCATCAACTACTTTACGTCCATGGTCATCGCTTCCCTCAAAATTGTCTCGCTCTTGCTTATTAGCCACCTTTTTTCTCCTACAAATGGAGCACAGGTTACTTATCTTCACCACAATTGCTCTCCCAACATAACCTTCGCCGCCAACAGTGCTTTTCAATCGGACCGAACGACGCTCTTCTCTTCCTTAGCTTTCGCCAAAACGGACTTCTACAACGCCACCGTTGTCGGTGGCGGCGACACCGTCCACGGCCTCTTCATGTGTCGGGGTGACGTCAACCTCTCGATGTGCCAGCAGTGCGTCGTTAACGCAACCCAACGATTATCTTCTGAGTGCCGAGTTTCGAAGGAGGCAATAATCTGGTACAACGAGTGCTTGCTTCGCTATTCTAACCGTTTCTTCTTCTCCACCGTTGACACGAGGCCAAGACTCAGCCTCTTTGACGCCGGAAGTGTCTCAAACCAGGCAAGCTTCATGAGAACATTGTACGATACTGTGAACACGACGGCAGATGAGGCAGCTAAACCTGCTGTTGGGAAAAAGAAGTATGCGACCGGATCAGCGAATTTCTCAGGGTTTCAAACTGTGTATTGTCTAGCACAGTGCACGCCGGACCTTTCGCCGTCAGATTGCAGAAGTTGCCTCCGTGGTGTGATTGGGGAGCTTCAGTGGTGTTGTAGTGGGAAGCAAGGAGGAAGAGTGCTGTACCCGAGCTGTAATGTTCGCTATGAGTTGCGCCCTTTCTATCAGTCGGAAGCTGCAAGTGTTCCTCCTACAAATACTACTGGTTCCCAAGGAAAAGGTGGAATCTCATCGGGGACGATTGTTGCGATTGTGGTTCCAACTTCTGTGGTTGTCCTGATGTTTATAGTCGGCATCTATTGCCTCAGTAAACGAACAATGAAGAAGTACGACTCTGTTCCCGAAGGAAAATCTGCATTTGACATCGGCAATGTGGATTCGCTGCAATATGATTTCAGTACAATTGAAGCAGCCACGAACAAGTTCTCTGTAGTTAACAAGATTGGTGAAGGCGGGTTTGGAGGGGTTTACAAGGGGACGCTTGCAAACGGACTAGAAATTGCCGTGAAGAGGCTCTCCCGAAGATCTGGACATGGTGTAGAAGAATTTAAGAATGAAGTAGAGGTGCTTGCCAGGCTACAACATAGATATTTAGTGAGACTTCTAGGTTTCTGCGTACATGGAGAAGAGAGGATACTTGTTTATGAATATATGTCCAACAAAAGTCTTGATTGCATTCTTTTTGATCCTGAAATGCAAAGGCAGCTAGACTGGACAAAACGTTATGATATTATCAGAGGAATTGCTCAAGGGATTCAATATTTACATGAAGATGCAACACTTAAAATTATACATCTTGATCTTAAAGTTGCAAATATATTATTGGATAGTGATATGAATCCAAAAATCTCAGATTTTGGTATGGCAACAATTTTTTCGATTGATCAAAGTCAAAAAGAGACCAATTGCATTGTGGGAACATTTGGTTATATATGTCCCGAATATGCTGTGTGTGGAGAGTTGTCTGTTAAGTCTGATGTGTTCAGCTTCGGTGTTCTTCTAATGGAGATTATAAGTGGAAAGAAGAATAGTTCTTTCTGTCAAATGGAGGATGCTGAGAACATGCTTAGCTATGCGTGGAAACTTTGGAACGATGGGGAACCCTTGGAATTGTTGGATCTCACAATAAGAGAATCTTGTGCTCCAGATGAAGTAATGAGATGCATCCACATTGGTCTGCTGTGTGTTCAAGAAGATCCAGCAGAGAGGCCTTCAATGTCATCCATAGTTCTGATGCTTGAAAATTATCCTATGACTCTGCCAACCCCTTCGCCGCCTGCATTTGTTGTGCAAAGTGTAGATTATCAAAACATTCTTGGTCAATCTACGACCAACACACTACCAATGTCAGTCAGCAAGATGTCGTTTAGTGAAGTAATGCCTCCGTAA 2856 0.4576 MASMVIMASYKIIPLLFFITFLSSATSDDESQPTFLSHACSSDKTFPANSAFQADLTTLLSSLASDNTANTDFYNTTVAGGGETAYGLFMCRGDVTLEVCHQCVVEATKRLTSDCQFSKEAIIWYDECTLRYSNTSFSTVDTRPRLGLLNTGNIANPASFMRLLFTTMNETADLAAKPALGKKKYATKEAFISGFQTLYCLAHCTPDLSPEDCRMCLSGVIGDLNWCCDGKQGGRVLYPSCNVRYELYPFYQTQDSAIPPNDFTGIIGRVTSDKCRTEINMINILLSLNYTHHKNCINYFTSMVIASLKIVSLLLISHLFSPTNGAQVTYLHHNCSPNITFAANSAFQSDRTTLFSSLAFAKTDFYNATVVGGGDTVHGLFMCRGDVNLSMCQQCVVNATQRLSSECRVSKEAIIWYNECLLRYSNRFFFSTVDTRPRLSLFDAGSVSNQASFMRTLYDTVNTTADEAAKPAVGKKKYATGSANFSGFQTVYCLAQCTPDLSPSDCRSCLRGVIGELQWCCSGKQGGRVLYPSCNVRYELRPFYQSEAASVPPTNTTGSQGKGGISSGTIVAIVVPTSVVVLMFIVGIYCLSKRTMKKYDSVPEGKSAFDIGNVDSLQYDFSTIEAATNKFSVVNKIGEGGFGGVYKGTLANGLEIAVKRLSRRSGHGVEEFKNEVEVLARLQHRYLVRLLGFCVHGEERILVYEYMSNKSLDCILFDPEMQRQLDWTKRYDIIRGIAQGIQYLHEDATLKIIHLDLKVANILLDSDMNPKISDFGMATIFSIDQSQKETNCIVGTFGYICPEYAVCGELSVKSDVFSFGVLLMEIISGKKNSSFCQMEDAENMLSYAWKLWNDGEPLELLDLTIRESCAPDEVMRCIHIGLLCVQEDPAERPSMSSIVLMLENYPMTLPTPSPPAFVVQSVDYQNILGQSTTNTLPMSVSKMSFSEVMPP 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5428g00002 951 FunFam Cysteine-rich receptor-like protein kinase 25 437 543 - -
Pral5428g00002 951 ProSiteProfiles Gnk2-homologous domain profile. 329 429 IPR002902 -
Pral5428g00002 951 SUPERFAMILY Protein kinase-like (PK-like) 617 931 IPR011009 -
Pral5428g00002 951 Gene3D - 438 543 IPR038408 -
Pral5428g00002 951 Gene3D - 32 137 IPR038408 -
Pral5428g00002 951 Gene3D - 145 250 IPR038408 -
Pral5428g00002 951 Gene3D - 326 429 IPR038408 -
Pral5428g00002 951 FunFam cysteine-rich receptor-like protein kinase 10 707 909 - -
Pral5428g00002 951 Pfam Salt stress response/antifungal 40 134 IPR002902 -
Pral5428g00002 951 Pfam Salt stress response/antifungal 158 248 IPR002902 -
Pral5428g00002 951 Pfam Salt stress response/antifungal 449 539 IPR002902 -
Pral5428g00002 951 Pfam Salt stress response/antifungal 339 426 IPR002902 -
Pral5428g00002 951 CDD STKc_IRAK 637 904 - -
Pral5428g00002 951 Gene3D Phosphorylase Kinase; domain 1 594 706 - -
Pral5428g00002 951 ProSiteProfiles Protein kinase domain profile. 631 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5428g00002 951 ProSiteProfiles Gnk2-homologous domain profile. 435 543 IPR002902 -
Pral5428g00002 951 Pfam Protein tyrosine and serine/threonine kinase 633 900 IPR001245 GO:0004672|GO:0006468
Pral5428g00002 951 ProSitePatterns Protein kinases ATP-binding region signature. 637 659 IPR017441 GO:0005524
Pral5428g00002 951 FunFam Cysteine-rich receptor-like protein kinase 10 593 706 - -
Pral5428g00002 951 ProSiteProfiles Gnk2-homologous domain profile. 142 250 IPR002902 -
Pral5428g00002 951 FunFam Cysteine-rich receptor-like protein kinase 25 144 250 - -
Pral5428g00002 951 ProSitePatterns Serine/Threonine protein kinases active-site signature. 752 764 IPR008271 GO:0004672|GO:0006468
Pral5428g00002 951 Gene3D Transferase(Phosphotransferase) domain 1 707 909 - -
Pral5428g00002 951 SMART serkin_6 631 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5428g00002 951 ProSiteProfiles Gnk2-homologous domain profile. 34 137 IPR002902 -
Pral5428g00002 951 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 33 136 - -
Pral5428g00002 951 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 386 926 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5428g00002 Pral-Chr5428 14433 21940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5428g00002 329 950 Receptor kinase-like Gene Family AT4G05200 47.158 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5428g00002 PK_Tyr_Ser-Thr 9.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5428g00002 - - gmx:100305391 797.349