LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral5428g00001	ATGGTCATCGCTTCTCTCAAAATTGTCTCTTTCTTGCTTATTAGCGTCCTCTTTTCTCCTGCAAATGAAGCACAGGTTACTTATCTTCACCACAATTGCTCTCCCAACATAACCTTCGCTGCCAACAGTGCTTTTCAATCGGACCGAACGACACTCTTCTCTTCCTTAGCTTTCGCCAACACCGACTTCTACAACGCCACCGTTGTCGGTGGCGGCGGCATGGTCCACGGCCTCTTTATGTGTCGGGGTGACGTCAACCTCTCGATGTGCCACCAGTGCGTCGTTAACGCTACCCAACGATTATCTTCCGAGTGCCGAGTTTCGAAGGAGGCAATAATCTGGTACGACGAGTGCTTGCTTCGCTATTCTAACCGTTTCTTCTTCTCCACCGTTGACACGAGGCCTAGACTCAGCCTCTTCGACGCCGGAAGTGTCTCAAACCAGGCAAGCTTCATGAGAACATTGTACGATATAATGAACAAGACGGCAGATGAGGCGGCTAAACCTGCTGTTGGGAAAAAGAAGTATGCGACCGGAACAGCGAATTTCTCAGGGTTTCAAACTACGTATTGTCTAGCACAGTGCACGCCGGAACTTTCGCCGTCAGATTGTAGAAGTTGCCTGAGTGGTGTGATTCGAGAACTTAAGTGGTGTTGTGGTGGAAAGCAAGGAGGAAGAGTGCTGTACCCGAGCTGTAATGTTCGTTATGAGTCGTACCCTTTCTATCAATCGGAAGCTGCGAGTGTTCCTCCTGCAAATACTGGTTCCCAAGGAAAAGGTGGAATCTCATCGGGGGCGGTTGTTGCTATTGTGGTTCCAACTTCTGTGGCTGTCCTAGTATTTATAGTCGGCATCTGTTGCTTGAGGAAACGAACAACGAAGAAGTACGACTCTGTTGCCGAAGGAAAATCTGCATTTGACATCGGCAATGTGGATTCACTGCAATATGATTTCAGTACAATTGAAGCAGCCACGAACAAGTTCTCTGTAGTTAACAAGATTGGTGAAGGCGGGTTTGGAGGGGTTTACAAGGGGACGCTTGCAAATGGACTAGAAATTGCTGTGAAGAGACTCTCCCGAAGATGTCGACAAGGTGTAGAAGAATTTAAGAATGAAGTAGAGGTGCTTGCCAGGCTACAACATGGAAATTTAGTGAGACTTCTAGGTTTCTGCGTACATGGAGAAGAGAGTATACTTGTTTATGAATATATGTCCAACAAAAGTCTCGATTGCATTCTTTTTGATCCTGAAATGCAAAGGCAGCTAGACTGGACAAAACGTTATGATATTATCAGAGGAATTGCTCAAGGGATTCAATATTTACATGAAGATGCAACACTTAAAATTATACATCTTGATCTTAAAGTTGCAAATATATTATTGGATAGTGATATGAATCCAAAAATCTCAGATTTTGGCATGGCAACAATTTTCTCGATTGATCAAACTCAAGAAAAGACCGATCGCATTGTGGGAACATATGGTTATATGTGTCCCAAATATTATATTCATGGAGAGTTGTCTGTTAAGTCTGGTGTGTTCAGCTTCGGCGTCCTTCTAATGGAGATTATAAGTGGAAAGAAGAATAGTCTTTTCTGTCAAACAGAGGATGCTGAGAACATGCTTAACTATGCGTGGAAACTTTGGAAGTATGGGGAACCCTTGGAATTGTTGGACCTCACAATAAGAGAATCCTGTGCTCCAGATGAAGTAATGAGATGCATCCACATTGGTCTGCTGTGTGTTCAAGAAGATCCAGCAGAGAGGCCTTCAATGTCATCCATAGTTCTGATGCTTGAAAATTATCCTATGACTCTGCCAACCCCTTCGCTGCCTCCACCTGTTTTGCGAAGTGGAGCTTGTCGAAACGTTCTTGGTCAATCTACGACCAACACACTACCAATGTCAGTCAACGAGATGTCGTTTAGTGAAGTAATGCCTCGGTAA	1947	0.4448	MVIASLKIVSFLLISVLFSPANEAQVTYLHHNCSPNITFAANSAFQSDRTTLFSSLAFANTDFYNATVVGGGGMVHGLFMCRGDVNLSMCHQCVVNATQRLSSECRVSKEAIIWYDECLLRYSNRFFFSTVDTRPRLSLFDAGSVSNQASFMRTLYDIMNKTADEAAKPAVGKKKYATGTANFSGFQTTYCLAQCTPELSPSDCRSCLSGVIRELKWCCGGKQGGRVLYPSCNVRYESYPFYQSEAASVPPANTGSQGKGGISSGAVVAIVVPTSVAVLVFIVGICCLRKRTTKKYDSVAEGKSAFDIGNVDSLQYDFSTIEAATNKFSVVNKIGEGGFGGVYKGTLANGLEIAVKRLSRRCRQGVEEFKNEVEVLARLQHGNLVRLLGFCVHGEESILVYEYMSNKSLDCILFDPEMQRQLDWTKRYDIIRGIAQGIQYLHEDATLKIIHLDLKVANILLDSDMNPKISDFGMATIFSIDQTQEKTDRIVGTYGYMCPKYYIHGELSVKSGVFSFGVLLMEIISGKKNSLFCQTEDAENMLNYAWKLWKYGEPLELLDLTIRESCAPDEVMRCIHIGLLCVQEDPAERPSMSSIVLMLENYPMTLPTPSLPPPVLRSGACRNVLGQSTTNTLPMSVNEMSFSEVMPR	648

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral5428g00001	648	ProSiteProfiles	Protein kinase domain profile.	328	605	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral5428g00001	648	ProSiteProfiles	Gnk2-homologous domain profile.	27	127	IPR002902	-
	Pral5428g00001	648	ProSiteProfiles	Gnk2-homologous domain profile.	133	241	IPR002902	-
	Pral5428g00001	648	FunFam	Cysteine-rich RLK (RECEPTOR-like protein kinase) 23	289	403	-	-
	Pral5428g00001	648	Gene3D	Phosphorylase Kinase; domain 1	289	403	-	-
	Pral5428g00001	648	ProSitePatterns	Protein kinases ATP-binding region signature.	334	356	IPR017441	GO:0005524
	Pral5428g00001	648	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	449	461	IPR008271	GO:0004672\|GO:0006468
	Pral5428g00001	648	Gene3D	Transferase(Phosphotransferase) domain 1	404	606	-	-
	Pral5428g00001	648	Gene3D	-	136	241	IPR038408	-
	Pral5428g00001	648	Gene3D	-	24	127	IPR038408	-
	Pral5428g00001	648	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	86	643	-	-
	Pral5428g00001	648	FunFam	cysteine-rich receptor-like protein kinase 10	404	606	-	-
	Pral5428g00001	648	SMART	serkin_6	328	605	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral5428g00001	648	Pfam	Salt stress response/antifungal	37	124	IPR002902	-
	Pral5428g00001	648	Pfam	Salt stress response/antifungal	146	239	IPR002902	-
	Pral5428g00001	648	SUPERFAMILY	Protein kinase-like (PK-like)	314	619	IPR011009	-
	Pral5428g00001	648	CDD	STKc_IRAK	334	601	-	-
	Pral5428g00001	648	FunFam	Cysteine-rich receptor-like protein kinase 25	135	241	-	-
	Pral5428g00001	648	Pfam	Protein tyrosine and serine/threonine kinase	330	597	IPR001245	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral5428g00001	Pral-Chr5428	6223	9556	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral5428g00001	4	648	Receptor kinase-like Gene Family	AT4G05200	46.154	0.0	585

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Pral5428g00001		PK_Tyr_Ser-Thr	6.8e-43	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral5428g00001	-		-	vun:114173511	788.875