Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5427g00004 ATGGTCATTGCTTCTCTCAAAATTGTCTCTTTCTTGCTTATTAGCGTCCTCTTTTCTCCTGCAAATGAAGCACAGGTTACTTATCTTCACCACAATTGCTCTTCCAACATAACCTTCGCTGCCAACAGTGCTTTTCAATCGGACCGAACGACACTCTTCTCTTCCTTAGCTTTCGCCAACACCGACTTCTACAACGCCACCGTTGTCGGTGGCGGCGACGCCGTCCACGGCCTCTTCATGTGTCGGGGTGACGTCAACCTCTCGATGTGCCACCAGTGCGTCGTTAACGCTACCCAACGATTATCTTCCGAGTGCCGAGTTTCGAAGGAGGCAATAATCTGGTACGACGAGTGCTTGCTTCGCTATTCTAACCGTTTCTTCTTCTCCACCGTCGACACGAGGCCTAGACTCAGCCTCTTCGACGCCGGAAGTGTCTCAAACCAGGCAAGCTTCATGAGAAAATTGTACGATATAATGAACAAGACGGCAGATGAGGCGGCTAGACCTCCTGTTGGGAAAAAGAAGTATGCGACCGGAACAGCGAATTTCTCAGGGTTTCAAACTATGTATTGTCTAGCACAGTGCACGCCGGACCTTTCGCCGTCAGATTGCAGAAGTTGCCTGAGTGGTGTGATTGGGGAACTTAAGTGGTGTTGTGGTGGGAAGCAAGGAGGAAGAGTGCTGTACCCGAGCTGTAATGTTCGCTATGAGTCGTACCCTTTCTATCAATCGGAAGCTGCGAGTGTTCCTCCTGCAAATACTGGTTCCCAAGGAAAAGGTGGAATCTCATCGGGGGCGATTGTTGCTATTGTGGTTCCAACTACTGTGGCTGTCCTAGTATTTATAGTCGGCATCTGTTGCTTGAGGAAACGAACAGCGAAGAAGTACGACTCTGTTGCCGAAGGAAAATCTGCATTTGACATCGGCAATGTGGATTCACTGCAATATGATTTCAGTGCAATTGAAGCAGCCACGAACAAGTTCTCTGTAGTTAACAAGATTGGTCAAGGCCTGTTTGGAGGGGTTTACAAGGGGACGCTTGCAAATGGATTAGAAATTGCTGTGAAGAGACTCTCTCGAAGATCTGGACCTGGTGTAGAAGAATTTAAGAATGAAGTAGAGGTGCTTGCCAGGCTACAACATGGAAATTTAGTGAGACTTCTAGGTTTCTGCGTACATGGAGAAGAGAGGATACTTGTTTATGAGTATATGCCCAACAAAAGTCTTGATTGCATTCTTTTTGACCCTGAAATGCAAAGACAGCTAGACTGGACAAAACGTTATGACATTGTGAAAGGAATTGCTCGAGGGCTTCAATATCTACATGAAGATGCAACACTTAAAATCATACATCTTAATCTTCAAGTTTCCAATATACTATTGGATAGTGATATGAATCCAAAAATCTCAGATTTTGCTATAGCAATAATTTTTCCGATCGATCAAACTCAAGGAAATACCAATCGCATTGTGGGAACATATGGCTATTTATCTCCTGAATATGCTATGTATGGAGAGTTTTCTGTTAAGTCTGATGTGTACAGTTTCGGTGTCCTTCTATTGGAGATTATAAGTGGGAAGAAGAATGTGGAGGCTGGTAAGGACTTGCTTAGCAATGCGTGGAAACTTTGGAAAGATGGAGAGCCCTTAGACTTGTTGGACCCCACAATAAGCGAATCTTATGCTCGAAATGAAGTCTTGAGATGCATCCACATTGGTCTGCTGTGTGTTCAAGAAGATCCAGCAGATAGACCTTCAATGGCATCCATTATTTTGATGCTTGATAGTTACTCTCTTATACTGCCAACCCCTTCGCAGCCTGCAACTTTCGACCCTAGTTCAGAAGAAGAATCTGTATTGCGATAG 1866 0.4486 MVIASLKIVSFLLISVLFSPANEAQVTYLHHNCSSNITFAANSAFQSDRTTLFSSLAFANTDFYNATVVGGGDAVHGLFMCRGDVNLSMCHQCVVNATQRLSSECRVSKEAIIWYDECLLRYSNRFFFSTVDTRPRLSLFDAGSVSNQASFMRKLYDIMNKTADEAARPPVGKKKYATGTANFSGFQTMYCLAQCTPDLSPSDCRSCLSGVIGELKWCCGGKQGGRVLYPSCNVRYESYPFYQSEAASVPPANTGSQGKGGISSGAIVAIVVPTTVAVLVFIVGICCLRKRTAKKYDSVAEGKSAFDIGNVDSLQYDFSAIEAATNKFSVVNKIGQGLFGGVYKGTLANGLEIAVKRLSRRSGPGVEEFKNEVEVLARLQHGNLVRLLGFCVHGEERILVYEYMPNKSLDCILFDPEMQRQLDWTKRYDIVKGIARGLQYLHEDATLKIIHLNLQVSNILLDSDMNPKISDFAIAIIFPIDQTQGNTNRIVGTYGYLSPEYAMYGEFSVKSDVYSFGVLLLEIISGKKNVEAGKDLLSNAWKLWKDGEPLDLLDPTISESYARNEVLRCIHIGLLCVQEDPADRPSMASIILMLDSYSLILPTPSQPATFDPSSEEESVLR 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5427g00004 621 ProSiteProfiles Gnk2-homologous domain profile. 133 241 IPR002902 -
Pral5427g00004 621 ProSiteProfiles Protein kinase domain profile. 328 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5427g00004 621 FunFam Cysteine-rich receptor-like protein kinase 10 289 403 - -
Pral5427g00004 621 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 26 127 - -
Pral5427g00004 621 Pfam Protein tyrosine and serine/threonine kinase 330 592 IPR001245 GO:0004672|GO:0006468
Pral5427g00004 621 ProSiteProfiles Gnk2-homologous domain profile. 27 127 IPR002902 -
Pral5427g00004 621 CDD STKc_IRAK 334 595 - -
Pral5427g00004 621 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 33 615 - -
Pral5427g00004 621 Gene3D - 24 127 IPR038408 -
Pral5427g00004 621 Gene3D - 136 241 IPR038408 -
Pral5427g00004 621 FunFam cysteine-rich receptor-like protein kinase 10 404 601 - -
Pral5427g00004 621 Pfam Salt stress response/antifungal 146 239 IPR002902 -
Pral5427g00004 621 Pfam Salt stress response/antifungal 33 124 IPR002902 -
Pral5427g00004 621 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Pral5427g00004 621 SUPERFAMILY Protein kinase-like (PK-like) 315 612 IPR011009 -
Pral5427g00004 621 FunFam Cysteine-rich receptor-like protein kinase 25 135 241 - -
Pral5427g00004 621 Gene3D Transferase(Phosphotransferase) domain 1 404 600 - -
Pral5427g00004 621 Gene3D Phosphorylase Kinase; domain 1 289 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5427g00004 Pral-Chr5427 19770 22876 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5427g00004 4 606 Receptor kinase-like Gene Family AT4G05200 47.695 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5427g00004 PK_Tyr_Ser-Thr 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5427g00004 - - gmx:100305391 790.801