Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5427g00003 ATGACGTCCATGGTCAAGGCTTCCCCCAAAATTTTCTTACTCTTCTTCTTCGTTGCCTTTCTCCATTCTCCCACAACCCAAGCTCAGGTTACTTATCTCTACCAAAATTGCTCTTCCAACAGTACCTTCGCAGCCAATAGCGTTTTTCAATCGGACCGCAAAAGACTCTTCTCTTCCTTGGCTTCCAGCAACAACACCGACACCGGCTTCTCCAACGCCACCGTTGTCGGTGGTGGCGACACCGTCTATGGCCTCTTCATGTGCCGGGGTGACGTCAACGTCTCGACGTGCCACCAGTGCGTCGTTAACGCAACCCAACTATTATCTTCCGAGTGCAGAGCTTCCAAGGAGGCCATAGTCTGGTACGACGAGTGCTTGCTTCGCTATTCTAACCGTTCCTTCTTCTCCACCGTCTCCACAAGGCCAAGGCTTGGCCTCTTGAACACCGGAAATGTCTCAGACCCGACAAACTTCATGAGAACATTGTACGATACTATGAACAAGACTGCAGATGAGGCGGCTAAACCTGCTGCGGGGAAAAAGAAATATGCGACCGGAATAGCAAATTTTTCGCCGTTTCAAAAAGTGTATTGTCTAGCTCAGTGCACGCCGGACCTTTCGCCGTCCGATTGCAGAAGGTGCCTGAGTGGTGTGATTGGGGACCTTGACTGGTGTTGTGACGGGAAGCAAGGAGGAAGAGTTCTGTACCCTAGCTGTAACGTTCGCTACGAATTGTACCCTTTCTACCAATCGGAGGCTCCGGCACCAACTCCTACGCCGACAACTGTGCCTCCGACAAATACTACAGGTTCCCAAGGAAAAAGTGGGATCTCATCGGGGACGATTGTTGCGATCGTGGTTCCAATTTCAGTGGCTGTTCTGATATTTATAGTTGGCATGTGTTGCTTGGGTAAAAGAATGAGGAAGAAGCATGACTCCGTTCCTGAAGTAAAATCTACAAGTGAAATCAGCAATTTGGATTCACTGCAATATGATTTCAGTACAATTGAAGCAGCTACGAACAAGTTTTCTGCAGATAACAAGCTTGGTGAAGGCGGATTTGGAAAGGTTTACAAGGGGACGCTTGCAAATGGACTAGAAATTGCTGTGAAGAAGCTCTCCCGGGAATCTGGACAAGGTGTACAAGAATTTAAGAATGAAGTAGAGGTGGTTGCCAAGTTACAGCACAGAAATTTGGTGAGGCTTCTGGGATTTTGTGTGCAAGGACAAGAGAAGATTCTTGTTTATGAATATGTTCCCAACAAAAGTCTTGATTACATTCTTTTTGAACCTGAAAAGCAAAGACAGCTAGATTGGACAAAGCGGTACAAGATTGTCAAAGGAATTGCTCGAGGCATTAAGTATCTTCATGAAGATTCAAGGCTTAAAATTATACATCGAGATCTTAAGGCTAGCAATGTATTATTGGATAGTGACATGAATCCGAAAATCTCAGATTTTGGTATGGCAAGGATTTTTATGGTGGACCAAACTCAAGGAAATACTAGTCGCATTGTAGGAACATATGGATATATGTCTCCGGAATACGCCATGCATGGAGAGTTTTCTGTTAAGTCTGATGTGTACAGCTTCGGTGTCCTTCTAATGGAGATTATAAGTGGGAAGAAGAATAGTTCTTTCTATCAAATAGAGGGTGCTGAGGACCTGCTTAGCTATGCCTGGAAACTTTGGAAGGATGGAGAACCCTTGCAACTGTTGGACCCCACAATAAGAGAATCTTACACTCCAAATGAAGTTATGAGATGCATCCACATTGGTCTGCTGTGTGTTCAAGAAGATCCAGCTGAGAGACCTTCAATGTCATCCATAGTTCTGATGCTTGATAGTTACTCTGTGACTCTGCCAACCCCTTCAAAGCCTGCATTTTTCGTCCATAGCGGAACTGATCCAAACATGCCAAAGTTGCTATTTGGTCAATCTACGACCAAGTCAGCGCCAATGTCGGTGAATGAGATGTCTGTTAGTGAAGTGATACCTCGGTAA 2004 0.4536 MTSMVKASPKIFLLFFFVAFLHSPTTQAQVTYLYQNCSSNSTFAANSVFQSDRKRLFSSLASSNNTDTGFSNATVVGGGDTVYGLFMCRGDVNVSTCHQCVVNATQLLSSECRASKEAIVWYDECLLRYSNRSFFSTVSTRPRLGLLNTGNVSDPTNFMRTLYDTMNKTADEAAKPAAGKKKYATGIANFSPFQKVYCLAQCTPDLSPSDCRRCLSGVIGDLDWCCDGKQGGRVLYPSCNVRYELYPFYQSEAPAPTPTPTTVPPTNTTGSQGKSGISSGTIVAIVVPISVAVLIFIVGMCCLGKRMRKKHDSVPEVKSTSEISNLDSLQYDFSTIEAATNKFSADNKLGEGGFGKVYKGTLANGLEIAVKKLSRESGQGVQEFKNEVEVVAKLQHRNLVRLLGFCVQGQEKILVYEYVPNKSLDYILFEPEKQRQLDWTKRYKIVKGIARGIKYLHEDSRLKIIHRDLKASNVLLDSDMNPKISDFGMARIFMVDQTQGNTSRIVGTYGYMSPEYAMHGEFSVKSDVYSFGVLLMEIISGKKNSSFYQIEGAEDLLSYAWKLWKDGEPLQLLDPTIRESYTPNEVMRCIHIGLLCVQEDPAERPSMSSIVLMLDSYSVTLPTPSKPAFFVHSGTDPNMPKLLFGQSTTKSAPMSVNEMSVSEVIPR 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5427g00003 667 SUPERFAMILY Protein kinase-like (PK-like) 329 634 IPR011009 -
Pral5427g00003 667 Gene3D Transferase(Phosphotransferase) domain 1 419 622 - -
Pral5427g00003 667 Gene3D - 28 134 IPR038408 -
Pral5427g00003 667 Gene3D - 143 248 IPR038408 -
Pral5427g00003 667 Pfam Salt stress response/antifungal 37 131 IPR002902 -
Pral5427g00003 667 Pfam Salt stress response/antifungal 151 246 IPR002902 -
Pral5427g00003 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Pral5427g00003 667 ProSiteProfiles Gnk2-homologous domain profile. 31 134 IPR002902 -
Pral5427g00003 667 FunFam Cysteine-rich receptor-like protein kinase 25 142 248 - -
Pral5427g00003 667 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 25 663 - -
Pral5427g00003 667 CDD STKc_IRAK 349 615 - -
Pral5427g00003 667 FunFam cysteine-rich receptor-like protein kinase 10 419 621 - -
Pral5427g00003 667 ProSiteProfiles Protein kinase domain profile. 343 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5427g00003 667 ProSitePatterns Protein kinases ATP-binding region signature. 349 372 IPR017441 GO:0005524
Pral5427g00003 667 Gene3D Phosphorylase Kinase; domain 1 303 418 - -
Pral5427g00003 667 MobiDBLite consensus disorder prediction 254 275 - -
Pral5427g00003 667 Pfam Protein tyrosine and serine/threonine kinase 345 613 IPR001245 GO:0004672|GO:0006468
Pral5427g00003 667 FunFam Cysteine-rich receptor-like protein kinase 10 305 418 - -
Pral5427g00003 667 ProSiteProfiles Gnk2-homologous domain profile. 140 248 IPR002902 -
Pral5427g00003 667 SMART serkin_6 343 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5427g00003 667 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 30 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5427g00003 Pral-Chr5427 13092 16591 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5427g00003 1 667 Receptor kinase-like Gene Family AT4G05200 50.661 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5427g00003 PK_Tyr_Ser-Thr 1.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5427g00003 - - gmx:100305391 909.057