Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5426g00007 ATGTCCATCTTCATCCTCCTCTCTCTCTTGGGATTTCTGAGCTTCACACCCGAAGCTGCTCCAGAATTTAGAAGTCATTTCTGTACTAATGGGAGCTATTTCGGACCCAACGATACATTCCAAGCCAATTTGAATTTCCTTCTCTCTTCCCTCACCTCCAACGCTTCTCTACCCGACGGTTACTACCGTACCACCGTGTCCCCGTCCACCCCCTCCACCATCACCGGGCTTTTCCTCTGTCGTGGCGACGTCACCCCCGCCGTGTGCCAGCCTTGCGTTGCCGCTGCATCCAAGGAGATAAGACGCCTCTGCCCAAACCAAACAGAGTCCATAATCTGGTACGATGTGTGTATGCTTCGTTACACGAACGGGAACTTGAACCCCATGGTTCCTTATGTGAGTTTGAGAAACACCAACACCATAGCTAGCTCGGAACGGGATCGATTCGACCGCGTGCTGTCGAACATGTTGAATAATGTGACAGAAAAAGCAAATATCCAGACAGGGTCCACAGGGAAGAGGTTCGCTACGGCGGAAGTGAACTTCACGTCGTCGGAAACCTTGTACAGCCTCGCACAGTGCACTCCTGACTCGGCCGGCTCTGTTTGTGATTCTTGTTTCCGCAGTGCCATTGCATCCCTTCCAAGTTGCTGTAGTGGGAGCAAGGGGGCAAATGTTCTGGTTCCATCATGTAATATCAGATATGAATTTTATCGGTTTTACAATATGACCCACGTTTCCTCTGAACCACTGGTTCCTCTTTCAGCTGGGATTGATATTTCAGAGATAGGGGCTTTGCAATTTGAATTGGCGGCCATAGAAGCTGCCACAAAAAAGTTCTCAGATAAGAACAAGATTGGCCAAGGTGGATATGGGGCAGTTTATAAGGGCATCCTTCCAAACGGACAGGAGATAGCTGTGAAGAGGTTGTCAGTAACCTCCTTGCAGGGTGCTATGGAGTTTAGAAATGAAGCCGCTCTTGTGGCCGAACTTCAACACAGGAATTTAGTGAGGCTGTTGGGATTTTGCTTAGAAGGGCAAGAGAAGATATTTGTCTATGAATATGTCCCAAACAAAAGCCTCGACACGTTTCTATTTGATCCAGAAAGGAAAACAAGACTAGATTGGCCAAAACGCTACAAGATTATTATAGGCATTGCTCGAGAAATGCTATATCTCCATGAAGATTCTCAATTTAGAATAATTCATCGTGATCTCAAAGCTAGTAATGTCTTGCTAGATACTAGTATGAATCCAAAAATTTCAGACTTTGGTATGGCAAAAATCTTCCAAGGTGAGCAGGCTCAAGCAAATACAGGAAGAATAGTTGGCACCTTTGGTTACATGTCTCCAGAGTATGCGATGCACGGACAATTTTCTGTAAAATCAGATGTGTTTAGCTTCGGTGTCTTGGTTTTAGAGATTATTACTGGCAAGAAGAACACTGATTTGTACCAATCACATCAAGCCGATGACCTCTTAAGCTATGCCTGGAATAACTGGACACGAAAAACACCTCTGGAGTTGTTGGATCCAACACTGAGAGGTTCTTATTCAAGAAATGAAGTCACAAGATGCATCCATATTGCTTTATCATGCGTTCAGGAGAACCGTTCTGACAGACCATCGATGGCAAATATAGTACTCGTGCTCAACAGTTACTCTGTTACTTTGTCATTGCCTCGAAAGCCTGCATCCTTACCGCTCAGAAGAACACCAAACAGGCAAAACAATGTCGTTGGTTCTGACCAATCTACATGTTCAATTCTATGGTCTACAGATGAAGCCCCCATCACTGACGTTTACCCTCGATAA 1815 0.454 MSIFILLSLLGFLSFTPEAAPEFRSHFCTNGSYFGPNDTFQANLNFLLSSLTSNASLPDGYYRTTVSPSTPSTITGLFLCRGDVTPAVCQPCVAAASKEIRRLCPNQTESIIWYDVCMLRYTNGNLNPMVPYVSLRNTNTIASSERDRFDRVLSNMLNNVTEKANIQTGSTGKRFATAEVNFTSSETLYSLAQCTPDSAGSVCDSCFRSAIASLPSCCSGSKGANVLVPSCNIRYEFYRFYNMTHVSSEPLVPLSAGIDISEIGALQFELAAIEAATKKFSDKNKIGQGGYGAVYKGILPNGQEIAVKRLSVTSLQGAMEFRNEAALVAELQHRNLVRLLGFCLEGQEKIFVYEYVPNKSLDTFLFDPERKTRLDWPKRYKIIIGIAREMLYLHEDSQFRIIHRDLKASNVLLDTSMNPKISDFGMAKIFQGEQAQANTGRIVGTFGYMSPEYAMHGQFSVKSDVFSFGVLVLEIITGKKNTDLYQSHQADDLLSYAWNNWTRKTPLELLDPTLRGSYSRNEVTRCIHIALSCVQENRSDRPSMANIVLVLNSYSVTLSLPRKPASLPLRRTPNRQNNVVGSDQSTCSILWSTDEAPITDVYPR 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5426g00007 604 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 21 126 - -
Pral5426g00007 604 ProSiteProfiles Protein kinase domain profile. 280 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5426g00007 604 ProSiteProfiles Gnk2-homologous domain profile. 129 240 IPR002902 -
Pral5426g00007 604 ProSiteProfiles Gnk2-homologous domain profile. 22 126 IPR002902 -
Pral5426g00007 604 Gene3D - 132 240 IPR038408 -
Pral5426g00007 604 Gene3D - 20 125 IPR038408 -
Pral5426g00007 604 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 246 355 - -
Pral5426g00007 604 Pfam Protein tyrosine and serine/threonine kinase 283 549 IPR001245 GO:0004672|GO:0006468
Pral5426g00007 604 CDD STKc_IRAK 286 552 - -
Pral5426g00007 604 ProSitePatterns Protein kinases ATP-binding region signature. 286 308 IPR017441 GO:0005524
Pral5426g00007 604 Gene3D Transferase(Phosphotransferase) domain 1 356 559 - -
Pral5426g00007 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 401 413 IPR008271 GO:0004672|GO:0006468
Pral5426g00007 604 SUPERFAMILY Protein kinase-like (PK-like) 267 582 IPR011009 -
Pral5426g00007 604 Pfam Salt stress response/antifungal 28 123 IPR002902 -
Pral5426g00007 604 Pfam Salt stress response/antifungal 144 237 IPR002902 -
Pral5426g00007 604 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 26 585 - -
Pral5426g00007 604 FunFam cysteine-rich receptor-like protein kinase 10 356 558 - -
Pral5426g00007 604 FunFam Cysteine-rich receptor-like protein kinase 10 131 240 - -
Pral5426g00007 604 Gene3D Phosphorylase Kinase; domain 1 253 355 - -
Pral5426g00007 604 SMART serkin_6 280 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5426g00007 Pral-Chr5426 44290 46907 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5426g00007 6 604 Receptor kinase-like Gene Family AT4G05200 45.970 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5426g00007 PK_Tyr_Ser-Thr 7.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5426g00007 - - gmx:100788416 757.673