Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5426g00006 ATGTCCGTCTTCATCGTCCTCTCTCTCTTGGGATTTCTGAGCTTCACACCCGAAGCTGCTCCAGAACCTAGAAGTTATTCCTGTAGTGATGGAAGCTATTTCGGACCCAACAGTCCATTCCAAGCCAATTTGAATTTCCTTCTCTCTTCCCTCACCTCCAACGCTTCTCTACCCGACGGTTACTACCGTACCACCGTGTCCCCGTCCACCCCTTCCACCATCACCGGTCTTTTCCTCTGTCGCGGCGACGTCACCCCCGCCGTGTGCCAGCCTTGCGTTGCCGCTGCATCCAAGGAGATAAGACGCCTCTGCCCAAACCAAACAGAGTCCATAATCTGGTACGATGTGTGTATGCTTCGTTACACGAACGGGAACTTGAACCCCATGGTTCCTTATGTGAGTTTGAGAAACACCAACACCATAGCTAGCTCGGAACGGGATCGATTCGACCGCGTGCTGTCGAACATGTTGAATAATGTGACAGAAAAAGCAAATATCCAGACAGGGTCCACAGGGAAGAGGTTCGCTACGGCGGAAGTGAACTTCACGTCGTCGGAAACCTTGTACAGCCTCGCACAGTGCACTCCTGACTCGGCCGGCTCTCACGTTTCCTCTGAACCACTGGTTCCTCCTACTTCAGGAAGTAGAAATATCTCAATGATTGTTGCGATTGTTGTTCCAATTGTTGTTGCTTTGGCACTTCTCGTTGTGGGTTGTTGTTTCCTCCGTAAGAGAGCAAGCAAGAAGTACAACTCGTTCACAGAGGATGCTGGGATTGATATTTCAGAAATAGAGTCTTTGCAATTTGAATTGGCAGCCATAGAAGCTGCCACGAAAAAGTTCTCAGATAAGAACAAGATTGGCCAAGGTGGATATGGGGCAGTTTATAAGGGCATCCTTCCAAACGGACAGGAGATAGCTGTGAAGAGGTTGTCGGTAACCTCCTTGCAGGGTGCTATGGAGTTTAGAAATGAAGCTGCTCTTGTGGCCAAACTTCAACACCGGAATTTAGTGAGGTTGTTGGGATTTTGCTTAGAAGGGCAAGAGAAGATACTTATCTATGAATATGTCCCAAACAAAAGCCTCGACAGGTTCCTATTTGATCCTGAAAGGAAAACAAGACTAGATTGGCCAAAACGCTACAAGATTATTGCAGGCATTGCTCGAGGAATGCTATATCTCCATGAAGATTCTCAACTTAGAATAATTCATCGTGACCTCAAAGCTAGTAATGTCCTACTAGATGCTAGTATGAATCCTAAAATCTCAGACTTTGGTATGGCAAAAATCTTCCAAGGTGATCAGGCTCAAGCAAATACAGGAAGAATAGTTGGCACCTTTGGTTACATGTCTCCAGAGTATGCGATGCACGGACAATTTTCTGTAAAATCAGATGTGTTTAGCTTTGGTGTCTTGGTTTTAGAGATTATTACTGGCAAGAAGAACACTGATTTGTACCAATCACATCAAGCCAATGACCTCTTAAGCTATGCCTGGAATAACTGGACACGAAAAACACCTCTGGAGTTGTTGGATCCAACACTGAGAGGTTCTTATTCAAGAAATGAAGTCATAAGATGTATCCATATTGCTTTATCATGCGTTCAGGAGAACCCTTCTGACAGACCATCGATGGCAAATATAGTACTCATGCTCAACAGTTACTCTGTTACTTTGTCATTGCCTCGAAAGCCTGCATCCTTACTGGGCAGAAGAACACCAAACAGGCAAAACAATGTTGTTGATTCTGACCAATCTACATGTTCGATTCTATGGTCTGAGCTCCGTTTTTGTAAGGTCTGTCTCAGTACTATGACAGAGAATGCGAATAATCTAATTTTACGACGACGGAAGTGA 1857 0.4518 MSVFIVLSLLGFLSFTPEAAPEPRSYSCSDGSYFGPNSPFQANLNFLLSSLTSNASLPDGYYRTTVSPSTPSTITGLFLCRGDVTPAVCQPCVAAASKEIRRLCPNQTESIIWYDVCMLRYTNGNLNPMVPYVSLRNTNTIASSERDRFDRVLSNMLNNVTEKANIQTGSTGKRFATAEVNFTSSETLYSLAQCTPDSAGSHVSSEPLVPPTSGSRNISMIVAIVVPIVVALALLVVGCCFLRKRASKKYNSFTEDAGIDISEIESLQFELAAIEAATKKFSDKNKIGQGGYGAVYKGILPNGQEIAVKRLSVTSLQGAMEFRNEAALVAKLQHRNLVRLLGFCLEGQEKILIYEYVPNKSLDRFLFDPERKTRLDWPKRYKIIAGIARGMLYLHEDSQLRIIHRDLKASNVLLDASMNPKISDFGMAKIFQGDQAQANTGRIVGTFGYMSPEYAMHGQFSVKSDVFSFGVLVLEIITGKKNTDLYQSHQANDLLSYAWNNWTRKTPLELLDPTLRGSYSRNEVIRCIHIALSCVQENPSDRPSMANIVLMLNSYSVTLSLPRKPASLLGRRTPNRQNNVVDSDQSTCSILWSELRFCKVCLSTMTENANNLILRRRK 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5426g00006 618 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 243 356 - -
Pral5426g00006 618 Gene3D - 132 205 IPR038408 -
Pral5426g00006 618 Gene3D - 23 125 IPR038408 -
Pral5426g00006 618 Pfam Protein tyrosine and serine/threonine kinase 284 551 IPR001245 GO:0004672|GO:0006468
Pral5426g00006 618 FunFam cysteine-rich receptor-like protein kinase 10 357 559 - -
Pral5426g00006 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 402 414 IPR008271 GO:0004672|GO:0006468
Pral5426g00006 618 CDD STKc_IRAK 287 553 - -
Pral5426g00006 618 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 28 587 - -
Pral5426g00006 618 SMART serkin_6 281 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5426g00006 618 ProSitePatterns Protein kinases ATP-binding region signature. 287 309 IPR017441 GO:0005524
Pral5426g00006 618 SUPERFAMILY Protein kinase-like (PK-like) 267 575 IPR011009 -
Pral5426g00006 618 ProSiteProfiles Gnk2-homologous domain profile. 21 126 IPR002902 -
Pral5426g00006 618 Gene3D Transferase(Phosphotransferase) domain 1 357 561 - -
Pral5426g00006 618 Gene3D Phosphorylase Kinase; domain 1 243 356 - -
Pral5426g00006 618 ProSiteProfiles Protein kinase domain profile. 281 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5426g00006 618 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 22 126 - -
Pral5426g00006 618 Pfam Salt stress response/antifungal 28 123 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5426g00006 Pral-Chr5426 29543 32061 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5426g00006 1 569 Receptor kinase-like Gene Family AT4G05200 46.761 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5426g00006 PK_Tyr_Ser-Thr 7.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5426g00006 - - gmx:547727 745.347